galK:Gene Product(s): Difference between revisions

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Table edited by Gwen via TableEdit
Table edited by Gwen via TableEdit
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[[Category:GO:0006012_!_galactose_metabolic_process]][http://gowiki.tamu.edu/wiki/index.php/Category:GO:0006012_!_galactose_metabolic_process GO:0006012]  
[[Category:GO:0006012_!_galactose_metabolic_process]][http://gowiki.tamu.edu/wiki/index.php/Category:GO:0006012_!_galactose_metabolic_process GO:0006012]  
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galactose metabolic process  
galactose metabolic process
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[[PMID:13390972]]<ref name=PMID:13390972/>
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IMP: Inferred from Mutant Phenotype
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P  
P
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Seeded from EcoCyc 11.1<ref name='LIB:EcoCyc11.1'/>.  
Seeded from EcoCyc 11.1<ref name='LIB:EcoCyc11.1'/>.  
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required fields missing 
complete
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IDA: Inferred from Direct Assay
IDA: Inferred from Direct Assay
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F
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complete
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[[Category:GO:0004335_!_galactokinase_activity]][http://gowiki.tamu.edu/wiki/index.php/Category:GO:0004335_!_galactokinase_activity GO:0004335]
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galactokinase activity
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[[PMID:13390972]]<ref name=PMID:13390972/>
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IMP: Inferred from Mutant Phenotype
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Revision as of 17:53, 18 July 2008

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
Nomenclature Function Interactions Localization Sequence Structure Resources Accessions Links References Suggestions

Nomenclature

Standard name

GalK product

Synonyms

galactokinase product[1], B0757 product[2][1], GalA product[2][1], GalK product[2][1], ATP:D-galactose 1-phosphotransferase product[2][1]

Product description

GALACTOKIN-MONOMER[2][3]

EC number (for enzymes)
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Notes

Function

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Gene Ontology

Qualifier GO ID GO term name Reference(s) Evidence Code with/from Aspect Notes Status
GO:0005737

cytoplasm

C

Seeded from EcoCyc 11.1[3].

required fields missing

GO:0006012

galactose metabolic process

PMID:13390972[4]

IMP: Inferred from Mutant Phenotype

P

Seeded from EcoCyc 11.1[3].

complete

GO:0009242

colanic acid biosynthetic process

P

Seeded from EcoCyc 11.1[3].

required fields missing

GO:0016052

carbohydrate catabolic process

P

Seeded from EcoCyc 11.1[3].

required fields missing

GO:0009269

response to desiccation

P

Seeded from EcoCyc 11.1[3].

required fields missing

GO:0042280

cell surface antigen activity, host-interacting

F

Seeded from Riley et al 2006 [1].

required fields missing

GO:0030113

capsule (sensu Bacteria)

C

Seeded from EcoCyc 11.1[3].

required fields missing

GO:0004335

galactokinase activity

PMID:13977183[5]

IDA: Inferred from Direct Assay

F

complete

GO:0004335

galactokinase activity

PMID:13390972[4]

IMP: Inferred from Mutant Phenotype

F

complete

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Interactions

Partner Type Partner Notes
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Notes

Localization

Compartment Description Evidence Notes
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Notes

Structure and Physical Properties

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Physical Properties

Sequence

at EcoCyc 

MSLKEKTQSL FANAFGYPAT HTIQAPGRVN LIGEHTDYND GFVLPCAIDY QTVISCAPRD
DRKVRVMAAD YENQLDEFSL DAPIVAHENY QWANYVRGVV KHLQLRNNSF GGVDMVISGN
VPQGAGLSSS ASLEVAVGTV LQQLYHLPLD GAQIALNGQE AENQFVGCNC GIMDQLISAL
GKKDHALLID CRSLGTKAVS MPKGVAVVII NSNFKRTLVG SEYNTRREQC ETGARFFQQP
ALRDVTIEEF NAVAHELDPI VAKRVRHILT ENARTVEAAS ALEQGDLKRM GELMAESHAS
MRDDFEITVP QIDTLVEIVK AVIGDKGGVR MTGGGFGGCI VALIPEELVP AVQQAVAEQY
EAKTGIKETF YVCKPSQGAG QC
Mol. Wt

41.44 kDa (calc) [2]

pI

5.52[2]

Extinction coefficient

20400 - 21525 (calc based on 10 Y, 1 W, and 9 C residues)

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Domains/Motifs/Modification Sites

Type Residues Description Notes
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Structure

Structure Type Organism Accession Residues covered Notes
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Notes

Gene Product Resources

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Resource type Source Notes/Reference

Purification protocol

PMID:13977183[5]

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Notes

Accessions in Other Databases

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Database Accession Notes

EcoCyc (EcoliWiki Page)

EcoCyc:GALACTOKIN-MONOMER

UniProt (EcoliWiki Page)

UniProt:P0A6T3

PFAM (EcoliWiki Page)

PFAM:PF00288

RefSeq (EcoliWiki Page)

RefSeq:NP_415278

ModBase (EcoliWiki Page)

ModBase:P0A6T3

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Notes

Links

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Name URL Comments
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References

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See Help:References for how to manage references in EcoliWiki.

  1. ↑ 1.0 1.1 1.2 1.3 1.4 1.5 1.6 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 2.5 2.6 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ 3.0 3.1 3.2 3.3 3.4 3.5 3.6 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 KURAHASHI, K (1957) Enzyme formation in galactose-negative mutants of Escherichia coli. Science 125 114-6 PubMed
  5. ↑ 5.0 5.1 SHERMAN, JR & ADLER, J (1963) Galactokinse from Escherichia coli. J. Biol. Chem. 238 873-8 PubMed


Categories

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