dnaX:Expression: Difference between revisions

From EcoliWiki
Jump to navigation Jump to search
← Older editNewer edit →
Edited by wikibot
Line 48: Line 48:
[[:Category:Txn_unit:dnaX|dnaX]]  
[[:Category:Txn_unit:dnaX|dnaX]]  
|-class='sortbottom'
|-class='sortbottom'
|[{{SERVER}}/colipedia/index.php?title=Special:TableEdit&id=421aa90e079fa326b6494f812ad13e79.33693.M46ab3e75ce132&page=33693&pagename={{FULLPAGENAMEE}} edit table]
|[{{SERVER}}{{SCRIPTPATH}}/index.php?title=Special:TableEdit&id=421aa90e079fa326b6494f812ad13e79.33693.M46ab3e75ce132&page=33693&pagename={{FULLPAGENAMEE}} edit table]
|}
|}
<!--box uid=421aa90e079fa326b6494f812ad13e79.33693.M46ab3e75ce132-->||{{RegulonDBfig|ECK120000239.jpg|DNAX}}
<!--box uid=421aa90e079fa326b6494f812ad13e79.33693.M46ab3e75ce132-->||{{RegulonDBfig|ECK120000239.jpg|DNAX}}
Line 85: Line 85:
!Allele Name!!Mutation!!Phenotype!!Reference
!Allele Name!!Mutation!!Phenotype!!Reference
|-class='sortbottom'
|-class='sortbottom'
|[{{SERVER}}/colipedia/index.php?title=Special:TableEdit&id=421aa90e079fa326b6494f812ad13e79.33693.Q46ab3e769201d&page=33693&pagename={{FULLPAGENAMEE}} edit table] || || ||
|[{{SERVER}}{{SCRIPTPATH}}/index.php?title=Special:TableEdit&id=421aa90e079fa326b6494f812ad13e79.33693.Q46ab3e769201d&page=33693&pagename={{FULLPAGENAMEE}} edit table] || || ||
|}
|}
<!--box uid=421aa90e079fa326b6494f812ad13e79.33693.Q46ab3e769201d-->
<!--box uid=421aa90e079fa326b6494f812ad13e79.33693.Q46ab3e769201d-->
Line 109: Line 109:
Summary of data for dnaX from multiple microarray studies   
Summary of data for dnaX from multiple microarray studies   
|-class='sortbottom'
|-class='sortbottom'
|[{{SERVER}}/colipedia/index.php?title=Special:TableEdit&id=421aa90e079fa326b6494f812ad13e79.33693.Y46ab3e7707109&page=33693&pagename={{FULLPAGENAMEE}} edit table] || ||
|[{{SERVER}}{{SCRIPTPATH}}/index.php?title=Special:TableEdit&id=421aa90e079fa326b6494f812ad13e79.33693.Y46ab3e7707109&page=33693&pagename={{FULLPAGENAMEE}} edit table] || ||
|}
|}
<!--box uid=421aa90e079fa326b6494f812ad13e79.33693.Y46ab3e7707109-->
<!--box uid=421aa90e079fa326b6494f812ad13e79.33693.Y46ab3e7707109-->
Line 126: Line 126:
!Resource Name!!Resource Type!!Description!!Source!!Notes
!Resource Name!!Resource Type!!Description!!Source!!Notes
|-class='sortbottom'
|-class='sortbottom'
|[{{SERVER}}/colipedia/index.php?title=Special:TableEdit&id=421aa90e079fa326b6494f812ad13e79.33693.V46ab3e776db8b&page=33693&pagename={{FULLPAGENAMEE}} edit table] || || || ||
|[{{SERVER}}{{SCRIPTPATH}}/index.php?title=Special:TableEdit&id=421aa90e079fa326b6494f812ad13e79.33693.V46ab3e776db8b&page=33693&pagename={{FULLPAGENAMEE}} edit table] || || || ||
|}
|}
<!--box uid=421aa90e079fa326b6494f812ad13e79.33693.V46ab3e776db8b-->
<!--box uid=421aa90e079fa326b6494f812ad13e79.33693.V46ab3e776db8b-->
Line 175: Line 175:
   
   
|-class='sortbottom'
|-class='sortbottom'
|[{{SERVER}}/colipedia/index.php?title=Special:TableEdit&id=421aa90e079fa326b6494f812ad13e79.33693.B46ab3e77d8828&page=33693&pagename={{FULLPAGENAMEE}} edit table] || ||
|[{{SERVER}}{{SCRIPTPATH}}/index.php?title=Special:TableEdit&id=421aa90e079fa326b6494f812ad13e79.33693.B46ab3e77d8828&page=33693&pagename={{FULLPAGENAMEE}} edit table] || ||
|}
|}
<!--box uid=421aa90e079fa326b6494f812ad13e79.33693.B46ab3e77d8828-->
<!--box uid=421aa90e079fa326b6494f812ad13e79.33693.B46ab3e77d8828-->
Line 196: Line 196:
!Name!!URL!!Comments
!Name!!URL!!Comments
|-class='sortbottom'
|-class='sortbottom'
|[{{SERVER}}/colipedia/index.php?title=Special:TableEdit&id=421aa90e079fa326b6494f812ad13e79.33693.K46ab3e7a57a39&page=33693&pagename={{FULLPAGENAMEE}} edit table] || ||
|[{{SERVER}}{{SCRIPTPATH}}/index.php?title=Special:TableEdit&id=421aa90e079fa326b6494f812ad13e79.33693.K46ab3e7a57a39&page=33693&pagename={{FULLPAGENAMEE}} edit table] || ||
|}
|}
<!--box uid=421aa90e079fa326b6494f812ad13e79.33693.K46ab3e7a57a39-->
<!--box uid=421aa90e079fa326b6494f812ad13e79.33693.K46ab3e7a57a39-->

Revision as of 09:40, 30 April 2008

{{#css:Suppresslinks.css}}<css>h1 .editsection { display:none;} h2 .editsection { display:none;}</css>

Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
Overview Transcription Translation Turnover Experimental Links References Suggestions

Overview

This is a placeholder for a summary statement on how expression of this gene product is regulated. You can help EcoliWiki by becoming a user and writing/editing this statement.
dnaX encodes two gene products from the same gene. A programmed frameshift is needed to generate the gamma subunit[1][2][3].

The amount of gamma is estimated to be about 20 molecules per cell, based on an estimate of 10 dimers[4]. However, while gamma purifies as a dimer, it is present as one subunit in the τ2γδδ'χψ DnaX complex.

Transcription and Transcriptional Regulation

[back to top]


Transcription unit(s)

dnaX

edit table
Figure courtesy of RegulonDB

See Help:Expression_transcription for help entering or editing information in this section of EcoliWiki.

Notes

This is a placeholder for a summary statement about how transcription of this gene is regulated. You can help EcoliWiki by becoming a user and writing/editing this statement.

Translation and Regulation of Translation

[back to top]


gbrowse_img.php?coord=491296..491336&genome=ecoli&name=MG1655&trackset=Genes_unlabeled+DNA_unlabeled&width=400&.png
This picture shows the sequence around the N-terminus.

Notes

This is a placeholder for a summary statement about how translation of this gene product is regulated. You can help EcoliWiki by becoming a user and writing/editing this statement.

Turnover and Regulation of Turnover

</protect>

Notes

This is a placeholder for a summary statement about turnover of this gene product. You can help EcoliWiki by becoming a user and writing/editing this statement.

Experimental

[back to top]


Mutations Affecting Expression

Allele Name Mutation Phenotype Reference
edit table

See Help:Expression_mutations for help entering or editing information in this section of EcoliWiki.

Expression Studies

Type Reference Notes

microarray

EcoliGenExpDB:b0470 (EcoliWiki Page)

Summary of data for dnaX from multiple microarray studies

edit table

See Help:Expression_studies for help entering or editing information in this section of EcoliWiki.

Expression Resources

Resource Name Resource Type Description Source Notes
edit table

See Help:Expression_resources for help entering or editing information in this section of EcoliWiki. <protect>

Notes

Accessions Related to dnaX Expression

[back to top]


Database Accession Notes

EcoCyc (EcoliWiki Page)

EcoCyc:EG10245

EchoBASE (EcoliWiki Page)

EchoBASE:EB0241

EcoliGenExpDB (EcoliWiki Page)

EcoliGenExpDB:b0470

EcoGene (EcoliWiki Page)

EcoGene:EG10245

edit table

See Help:Expression_accessions for help entering or editing information in this section of EcoliWiki.

Notes

Links

[back to top]


Name URL Comments
edit table

See Help:Links_table for how to enter or edit information in this section of EcoliWiki.

References

[back to top]


See Help:References for how to manage references in EcoliWiki.

  1. ↑ Tsuchihashi, Z & Kornberg, A (1990) Translational frameshifting generates the gamma subunit of DNA polymerase III holoenzyme. Proc. Natl. Acad. Sci. U.S.A. 87 2516-20 PubMed
  2. ↑ Blinkowa, AL & Walker, JR (1990) Programmed ribosomal frameshifting generates the Escherichia coli DNA polymerase III gamma subunit from within the tau subunit reading frame. Nucleic Acids Res. 18 1725-9 PubMed
  3. ↑ Flower, AM & McHenry, CS (1990) The gamma subunit of DNA polymerase III holoenzyme of Escherichia coli is produced by ribosomal frameshifting. Proc. Natl. Acad. Sci. U.S.A. 87 3713-7 PubMed
  4. ↑ Hübscher, U & Kornberg, A (1980) The dnaZ protein, the gamma subunit of DNA polymerase III holoenzyme of Escherichia coli. J. Biol. Chem. 255 11698-703 PubMed


Categories

[back to top]


Retrieved from "https://ecoliwiki.org/colipedia/index.php?title=dnaX:Expression&oldid=399193"