nadC:Gene Product(s): Difference between revisions
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[[Category:GO:0005737_!_cytoplasm]][[Category:GO:0009435_!_NAD biosynthetic process]][[Category:Complex:quinolinate phosphoribosyltransferase (decarboxylating)]] | [[Category:GO:0005737_!_cytoplasm]][[Category:GO:0009435_!_NAD biosynthetic process]][[Category:Complex:quinolinate phosphoribosyltransferase (decarboxylating)]] | ||
[[Category:GO Annotation by EcoliWiki Team]] | |||
Revision as of 20:25, 28 March 2008
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| Quickview | Gene | Gene Product(s) | Expression | Evolution | On One Page |
| Nomenclature | Function | Interactions | Localization | Sequence | Structure | Resources | Accessions | Links | References | Suggestions |
Nomenclature
| Standard name |
NadC product |
|---|---|
| Synonyms |
quinolinate phosphoribosyltransferase product[1], B0109 product[2][1], Nic product[2][1], NadC product[2][1], nicotinate-nucleotide pyrophosphorylase (carboxylating) product[2][1], QAPRTase product[2][1], nicotinate-nucleotide:pyrophosphate phospho-α-D-ribosyltransferase (carboxylating) product[2][1] |
| Product description |
quinolinate phosphoribosyltransferase (decarboxylating) monomer[2][3]; Component of ; quinolinate phosphoribosyltransferase (decarboxylating)[2][3] |
| EC number (for enzymes) | |
| edit table | |
See Help:Product_nomenclature for help entering or editing information in this section of EcoliWiki.
Notes
Function
Gene Ontology
| Qualifier | GO ID | GO term name | Reference(s) | Evidence Code | with/from | Aspect | Notes | Status |
|---|---|---|---|---|---|---|---|---|
| GO:0005737 |
cytoplasm |
C |
Seeded from Riley et al 2006 [1]. |
required fields missing | ||||
| GO:0009435 |
NAD biosynthetic process |
P |
Seeded from EcoCyc 11.1[3]. |
required fields missing | ||||
| GO:0004514 |
nicotinate-nucleotide diphosphorylase (carboxylating) activity |
ISS: Inferred from Sequence or Structural Similarity |
P30012 from |
F |
Activity for S. typhimurium NadC shown in [4] |
required field missing | ||
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See Help:Gene_ontology for help entering or editing GO terms and GO annotations in EcoliWiki.
Interactions
| Partner Type | Partner | Notes |
|---|---|---|
|
Protein |
Subunits of quinolinate phosphoribosyltransferase (decarboxylating) |
could be indirect |
| edit table |
See Help:Product_interactions for help entering or editing information about gene product interactions in this section of EcoliWiki.
Notes
Localization
| Compartment | Description | Evidence | Notes |
|---|---|---|---|
| edit table |
See Help:Product_localization for how to add or edit information in this section of EcoliWiki.
Notes
Structure and Physical Properties
Physical Properties
| Sequence |
MPPRRYNPDT RRDELLERIN LDIPGAVAQA LREDLGGTVD ANNDITAKLL PENSRSHATV ITRENGVFCG KRWVEEVFIQ LAGDDVTIIW HVDDGDVINA NQSLFELEGP SRVLLTGERT ALNFVQTLSG VASKVRHYVE LLEGTNTQLL DTRKTLPGLR SALKYAVLCG GGANHRLGLS DAFLIKENHI IASGSVRQAV EKASWLHPDA PVEVEVENLE ELDEALKAGA DIIMLDNFET EQMREAVKRT NGKALLEVSG NVTDKTLREF AETGVDFISV GALTKHVQAL DLSMRFR |
|---|---|
| Mol. Wt |
32.76 kDa (calc) [2] |
| pI |
4.86[2] |
| Extinction coefficient |
20970 - 21220 (calc based on 3 Y, 3 W, and 2 C residues) |
| edit table | |
See Help:Product_physical_properties for help entering or editing information about the physical properties of this gene product.
Domains/Motifs/Modification Sites
| Type | Residues | Description | Notes |
|---|---|---|---|
| edit table |
See Help:Product_domains_motifs for help entering or editing information in this section of EcoliWiki.
Structure
| Structure Type | Organism | Accession | Residues covered | Notes |
|---|---|---|---|---|
| edit table |
See Help:Product_structure for help entering or editing information in this section of EcoliWiki.
Notes
Gene Product Resources
| Resource type | Source | Notes/Reference |
|---|---|---|
| edit table |
See Help:Product_resources for help with entering or editing information in this section of EcoliWiki.
Notes
Accessions in Other Databases
| Database | Accession | Notes |
|---|---|---|
| edit table |
See Help:Product_accessions for help entering or editing information in this section of EcoliWiki.
Notes
Links
| Name | URL | Comments |
|---|---|---|
| edit table |
See Help:Links_table for how to enter or edit information in this section of EcoliWiki.
References
See Help:References for how to manage references in EcoliWiki.
- ↑ 1.0 1.1 1.2 1.3 1.4 1.5 1.6 1.7 1.8 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
- ↑ 2.00 2.01 2.02 2.03 2.04 2.05 2.06 2.07 2.08 2.09 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ 3.0 3.1 3.2 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ Hughes, KT et al. (1993) The Salmonella typhimurium nadC gene: sequence determination by use of Mud-P22 and purification of quinolinate phosphoribosyltransferase. J. Bacteriol. 175 479-86 PubMed
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