Phage lambda exo:Gene Product(s): Difference between revisions

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Table edited by Bmcintosh via TableEdit
Table edited by Bmcintosh via TableEdit
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!|Qualifier!!GO ID!!GO term name!!Reference!!Evidence Code!!with/from!!Aspect!!Notes!!Status
!|Qualifier!!GO ID!!GO term name!!Reference!!Evidence Code!!with/from!!Aspect!!Notes!!Status
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GO:0035312
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5'-3' exodeoxyribonuclease activity
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PMID:6017737
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IDA: Inferred from Direct Assay
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F
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complete
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GO:0006310
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DNA recombination
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PMID:4934524
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IDA: Inferred from Direct Assay
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P
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complete


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Revision as of 00:32, 28 August 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
Nomenclature Function Interactions Localization Sequence Domains Structure Resources Accessions Links References Suggestions

Nomenclature

See Help:Product_nomenclature for help entering or editing information in this section of EcoliWiki.

Standard name

exo

Synonyms

exo, lambdap41, redα [1], RedX [2]

Product description

exonuclease

EC number (for enzymes)


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Notes

Function

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Gene Ontology See Help:Gene_ontology for help entering or editing GO terms and GO annotations in EcoliWiki.

Qualifier GO ID GO term name Reference Evidence Code with/from Aspect Notes Status
GO:0035312

5'-3' exodeoxyribonuclease activity

PMID:6017737[3]

IDA: Inferred from Direct Assay

F

complete

GO:0006310

DNA recombination

PMID:4934524[4]

IDA: Inferred from Direct Assay

P

complete

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Interactions

<protect> See Help:Product_interactions for help entering or editing information about gene product interactions in this section of EcoliWiki.

Partner Type Partner Notes References Evidence
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Notes

Localization

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Compartment Description Evidence Reference/Source Notes
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Notes

Structure and Physical Properties

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Physical Properties See Help:Product_physical_properties for help entering or editing information about the physical properties of this gene product.

Name
Sequence 
MTPDIILQRT GIDVRAVEQG DDAWHKLRLG VITASEVHNV IAKPRSGKKW PDMKMSYFHT
LLAEVCTGVA PEVNAKALAW GKQYENDART LFEFTSGVNV TESPIIYRDE SMRTACSPDG
LCSDGNGLEL KCPFTSRDFM KFRLGGFEAI KSAYMAQVQY SMWVTRKNAW YFANYDPRMK
REGLHYVVIE RDEKYMASFD EIVPEFIEKM DEALAEIGFV FGEQWR
Length

226

Mol. Wt

25.908 kDa

pI

5.6 (calculated)

Extinction coefficient

46,410 - 46,910 (calc based on 9 Y, 6 W, and 4 C residues)

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Domains/Motifs/Modification Sites

See Help:Product_domains_motifs for help entering or editing information in this section of EcoliWiki.

Type Residues Description Notes References
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See Help:Product_domains_motifs for help entering or editing information in this section of EcoliWiki.

<motif_map/>

Structure
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Structures

<beststructure> gene=Phage_lambda_exo taxon=10710 </beststructure>

Models

View models at:

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Structure figures

Notes

Gene Product Resources

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See Help:Product_resources for help with entering or editing information in this section of EcoliWiki.

Resource type Source Notes/Reference
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Notes

Accessions in Other Databases

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes
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Notes

Links

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Name URL Comments
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References

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See Help:References for how to manage references in EcoliWiki.

  1. ↑ Edited by Roger W. Hendrix, Jeffrey W. Roberts, Franklin W. Stahl and Robert A. Weisberg (1983) Lambda II (Cold Spring Harbor Laboratory, Cold Spring Harbor, NY)
  2. ↑ Herskowitz, I & Hagen, D (1980) The lysis-lysogeny decision of phage lambda: explicit programming and responsiveness. Annu. Rev. Genet. 14 399-445 PubMed
  3. ↑ Little, JW (1967) An exonuclease induced by bacteriophage lambda. II. Nature of the enzymatic reaction. J. Biol. Chem. 242 679-86 PubMed
  4. ↑ Cassuto, E et al. (1971) Role of exonuclease and beta protein of phage lambda in genetic recombination. V. Recombination of lambda DNA in vitro. Proc. Natl. Acad. Sci. U.S.A. 68 1639-43 PubMed

Categories

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