minD:Expression: Difference between revisions

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changing wording for Ishihama paper.
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Protein
Protein
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UT481
''E. coli'' K-12 MC4100
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3000
1.32E+03
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molecules/cell
molecules/cell
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|
LB
median data from rich and minimal media
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|
37
37
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|
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quantitative western
emPAI
|
|


|
|
PMID:1836760
PMID:18304323
|-  
|-  
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|
Protein
Protein
|
|
''E. coli'' K-12 MC4100
UT481
|
|
1.32E+03
3000
|
|
molecules/cell
molecules/cell
|
|
combined data from rich and minimal media
LB
|
|
37
37
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|
|
emPAI
quantitative western
|
|


|
|
PMID:18304323
PMID:1836760


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|- class="tableEdit_footer"  

Revision as of 18:56, 12 July 2010

{{#css:Suppresslinks.css}}<css>h1 .editsection { display:none;} h2 .editsection { display:none;}</css>

Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
Overview Transcription Translation Turnover Experimental Links References Suggestions

Overview

This is a placeholder for a summary statement on how expression of this gene product is regulated. You can help EcoliWiki by becoming a user and writing/editing this statement.


Cellular Levels

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See Help:Cellular levels

Molecule Organism or Strain Cellular level Units Medium Temperature °C Other (e.g. anaerobic) Growth rate Assay used Notes Reference(s)

Protein

E. coli K-12 MC4100

1.32E+03

molecules/cell

median data from rich and minimal media

37

emPAI

PMID:18304323[1]

Protein

UT481

3000

molecules/cell

LB

37

quantitative western

PMID:1836760[2]

Notes

Transcription and Transcriptional Regulation

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See Help:Expression_transcription for help entering or editing information in this section of EcoliWiki.

Transcription unit(s)

minCDE

Figure courtesy of RegulonDB


Notes

This is a placeholder for a summary statement about how transcription of this gene is regulated. You can help EcoliWiki by becoming a user and writing/editing this statement.

Translation and Regulation of Translation

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gbrowse_img.php?coord=1224564..1224604&genome=ecoli&name=MG1655&trackset=Gene+DNA_+Protein+flip&width=400&figure=Nterm&.png
This picture shows the sequence around the N-terminus.

Notes

This is a placeholder for a summary statement about how translation of this gene product is regulated. You can help EcoliWiki by becoming a user and writing/editing this statement.

Turnover and Regulation of Turnover

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Notes

This is a placeholder for a summary statement about turnover of this gene product. You can help EcoliWiki by becoming a user and writing/editing this statement.

Experimental

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Mutations Affecting Expression See Help:Expression_mutations for help entering or editing information in this section of EcoliWiki.

Allele Name Mutation Phenotype Reference


Expression Studies See Help:Expression_studies for help entering or editing information in this section of EcoliWiki.

Type Reference Notes

microarray

GEO Profiles:b1175 (EcoliWiki Page)

NCBI GEO profiles for minD

microarray

GenExpDB:b1175 (EcoliWiki Page)

Summary of data for minD from multiple microarray studies


Expression Resources See Help:Expression_resources for help entering or editing information in this section of EcoliWiki.

Resource Name Resource Type Description Source Notes

<protect>

Notes

Accessions Related to minD Expression

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

EcoCyc (EcoliWiki Page)

EcoCyc:EG10597

EchoBASE (EcoliWiki Page)

EchoBASE:EB0592

EcoliGenExpDB (EcoliWiki Page)

EcoliGenExpDB:b1175

EcoGene (EcoliWiki Page)

EcoGene:EG10597



Notes

Links

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References

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See Help:References for how to manage references in EcoliWiki.

  1. ↑ Ishihama, Y et al. (2008) Protein abundance profiling of the Escherichia coli cytosol. BMC Genomics 9 102 PubMed
  2. ↑ de Boer, PA et al. (1991) The MinD protein is a membrane ATPase required for the correct placement of the Escherichia coli division site. EMBO J. 10 4371-80 PubMed

Categories

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