tatE:Gene Product(s): Difference between revisions

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touch the Product_motif_table table.
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!|Qualifier!!GO ID!!GO term name!!Reference(s)!!Evidence Code!!with/from!!Aspect!!Notes!!Status
!|Qualifier!!GO ID!!GO term name!!Reference(s)!!Evidence Code!!with/from!!Aspect!!Notes!!Status
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GO:0065002
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intracellular protein transmembrane transport
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GO_REF:0000004
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IEA: Inferred from Electronic Annotation
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SP_KW:KW-0811
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P
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Seeded from EcoCyc <ref name = 'LIB:EcoCyc13.0'/>
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complete
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GO:0016021
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integral to membrane
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GO_REF:0000002<br />GO_REF:0000004
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IEA: Inferred from Electronic Annotation
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InterPro:IPR006312<br />SP_KW:KW-0812
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C
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Seeded from EcoCyc <ref name = 'LIB:EcoCyc13.0'/>
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complete
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GO:0016020
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membrane
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GO_REF:0000004<br />GO_REF:0000004
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IEA: Inferred from Electronic Annotation
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SP_KW:KW-0397<br />SP_KW:KW-0472
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C
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Seeded from EcoCyc 12.5 <ref name = 'LIB:EcoCyc12.5'/>
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complete
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GO:0015031
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protein transport
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GO_REF:0000002<br />GO_REF:0000002<br />GO_REF:0000004<br />GO_REF:0000020
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IEA: Inferred from Electronic Annotation
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InterPro:IPR003369<br />InterPro:IPR006312<br />SP_KW:KW-0653<br />HAMAP:MF_00236
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P
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Seeded from EcoCyc 12.5 <ref name = 'LIB:EcoCyc12.5'/>
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complete
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GO:0009306
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protein secretion
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GO_REF:0000020
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IEA: Inferred from Electronic Annotation
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HAMAP:MF_00236
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P
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Seeded from EcoCyc <ref name = 'LIB:EcoCyc13.0'/>
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complete
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GO:0006810
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transport
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GO_REF:0000004
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IEA: Inferred from Electronic Annotation
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SP_KW:KW-0813
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P
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Seeded from EcoCyc <ref name = 'LIB:EcoCyc13.0'/>
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complete
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GO:0008565
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protein transporter activity
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GO_REF:0000002<br />GO_REF:0000020
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IEA: Inferred from Electronic Annotation
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InterPro:IPR003369<br />HAMAP:MF_00236
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F
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Seeded from EcoCyc 12.5 <ref name = 'LIB:EcoCyc12.5'/>
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complete
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GO:0015292
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uniporter activity
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F
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Seeded from EcoCyc 11.1<ref name='LIB:EcoCyc11.1'/>.
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required fields missing 
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GO:0005886
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plasma membrane
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GO_REF:0000020<br />GO_REF:0000004<br />GO_REF:0000004<br />GO_REF:0000023
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IEA: Inferred from Electronic Annotation
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HAMAP:MF_00236<br />SP_KW:KW-0997<br />SP_KW:KW-1003<br />SP_SL:SL-0037
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C
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Seeded from EcoCyc <ref name = 'LIB:EcoCyc13.0'/>
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complete
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GO:0005515
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protein_binding
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PMID:16606699<br />
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IPI: Inferred from Physical Interaction
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UniProtKB:P24251
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F
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Seeded from EcoCyc 12.5 <ref name = 'LIB:EcoCyc12.5'/>
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Revision as of 22:07, 10 June 2010

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
Nomenclature Function Interactions Localization Sequence Domains Structure Resources Accessions Links References Suggestions

Nomenclature

See Help:Product_nomenclature for help entering or editing information in this section of EcoliWiki.

Standard name

TatE

Synonyms

TatABCE protein translocation system subunit[1], B0627[2][1], YbeC[2][1], TatE[2][1]

Product description

TatE[2][3];

Component of TatABCE protein export complex[2][3]

Protein translocase, Sec-independent; mediates export of folded and ligand-bound proteins[4]

EC number (for enzymes)


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Notes

Function

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Gene Ontology
See Help:Gene_ontology for help entering or editing GO terms and GO annotations in EcoliWiki.

Qualifier GO ID GO term name Reference(s) Evidence Code with/from Aspect Notes Status
GO:0008565

protein transporter activity

PMID:9649434[5]

IGI: Inferred from Genetic Interaction

EcoliWiki:tatA

F

complete

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Interactions See Help:Product_interactions for help entering or editing information about gene product interactions in this section of EcoliWiki.

Partner Type Partner Notes References Evidence

Protein

Subunits of TatABCE protein export complex

could be indirect


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Notes

Localization

See Help:Product_localization for how to add or edit information in this section of EcoliWiki.

Compartment Description Evidence Source Notes
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Notes

Structure and Physical Properties

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Physical Properties See Help:Product_physical_properties for help entering or editing information about the physical properties of this gene product.

Sequence

at EcoCyc 

MGEISITKLL VVAALVVLLF GTKKLRTLGG DLGAAIKGFK KAMNDDDAAA KKGADVDLQA
EKLSHKE
Length

67

Mol. Wt

7.024 kDa

pI

9.5 (calculated)

Extinction coefficient

0 (calc based on Y, W, and C residues)

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Domains/Motifs/Modification Sites

See Help:Product_domains_motifs for help entering or editing information in this section of EcoliWiki.

Type Residues Description Notes References
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<motif_map/>

Structure
See Help:Product_structure for help entering or editing information in this section of EcoliWiki.

Structures

<beststructure> gene=tatE taxon=562,83333 </beststructure>

Models

View models at:

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Structure figures

Notes

Gene Product Resources

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See Help:Product_resources for help with entering or editing information in this section of EcoliWiki.

Resource type Source Notes/Reference
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Notes

Accessions in Other Databases

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

EcoCyc (EcoliWiki Page)

EcoCyc:EG11305-MONOMER

UniProt (EcoliWiki Page)

UniProt:P0A843

PFAM (EcoliWiki Page)

PFAM:PF02416

RefSeq (EcoliWiki Page)

RefSeq:NP_415160


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Notes

Links

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References

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See Help:References for how to manage references in EcoliWiki.

  1. ↑ 1.0 1.1 1.2 1.3 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ 3.0 3.1 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
  5. ↑ Sargent, F et al. (1998) Overlapping functions of components of a bacterial Sec-independent protein export pathway. EMBO J. 17 3640-50 PubMed

Categories

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