prs:Gene Product(s): Difference between revisions
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!|Qualifier!!GO ID!!GO term name!!Reference(s)!!Evidence Code!!with/from!!Aspect!!Notes!!Status | !|Qualifier!!GO ID!!GO term name!!Reference(s)!!Evidence Code!!with/from!!Aspect!!Notes!!Status | ||
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Revision as of 21:49, 10 June 2010
{{#css:Suppresslinks.css}}<css>h1 .editsection { display:none;} h2 .editsection { display:none;}</css>
| Quickview | Gene | Gene Product(s) | Expression | Evolution | On One Page |
| Nomenclature | Function | Interactions | Localization | Sequence | Domains | Structure | Resources | Accessions | Links | References | Suggestions |
Nomenclature
See Help:Product_nomenclature for help entering or editing information in this section of EcoliWiki.
| Standard name |
PrsA |
|---|---|
| Synonyms |
phosphoribosylpyrophosphate synthase[1], B1207[2][1], DnaR[2][1], Prs[2][1], PrsA[2][1] |
| Product description |
Phosphoribosylpyrophosphate synthase[3] |
| EC number (for enzymes) | |
| edit table |
Notes
Function
Gene Ontology
See Help:Gene_ontology for help entering or editing GO terms and GO annotations in EcoliWiki.
| Qualifier | GO ID | GO term name | Reference(s) | Evidence Code | with/from | Aspect | Notes | Status |
|---|---|---|---|---|---|---|---|---|
| edit table |
Interactions See Help:Product_interactions for help entering or editing information about gene product interactions in this section of EcoliWiki.
| Partner Type | Partner | Notes | References | Evidence |
|---|---|---|---|---|
|
Protein |
npdA |
Experiment(s):EBI-880430, EBI-881344, EBI-885898 | ||
|
Protein |
dnaJ |
Experiment(s):EBI-880430, EBI-885898 | ||
|
Protein |
dnaK |
Experiment(s):EBI-880430 | ||
|
Protein |
groL |
Experiment(s):EBI-880430, EBI-885898 | ||
|
Protein |
mreB |
Experiment(s):EBI-880430 | ||
|
Protein |
rplB |
Experiment(s):EBI-880430, EBI-885898 | ||
|
Protein |
rplE |
Experiment(s):EBI-880430 | ||
|
Protein |
rplJ |
Experiment(s):EBI-880430 | ||
|
Protein |
rplP |
Experiment(s):EBI-880430, EBI-885898 | ||
|
Protein |
rpsB |
Experiment(s):EBI-880430, EBI-885898 | ||
|
Protein |
rpsC |
Experiment(s):EBI-880430, EBI-885898 | ||
|
Protein |
rpsD |
Experiment(s):EBI-880430, EBI-885898 | ||
|
Protein |
rpsG |
Experiment(s):EBI-880430, EBI-885898 | ||
|
Protein |
tufA |
Experiment(s):EBI-880430, EBI-885898 | ||
|
Protein |
rluB |
Experiment(s):EBI-880430 | ||
|
Protein |
yibA |
Experiment(s):EBI-880430 | ||
|
Protein |
nusG |
Experiment(s):EBI-885898 | ||
|
Protein |
rho |
Experiment(s):EBI-885898 | ||
|
Protein |
rplC |
Experiment(s):EBI-885898 | ||
|
Protein |
rplD |
Experiment(s):EBI-885898 | ||
|
Protein |
rplI |
Experiment(s):EBI-885898 | ||
|
Protein |
rplK |
Experiment(s):EBI-885898 | ||
|
Protein |
rplL |
Experiment(s):EBI-885898 | ||
|
Protein |
rplM |
Experiment(s):EBI-885898 | ||
|
Protein |
rplN |
Experiment(s):EBI-885898 | ||
|
Protein |
rplO |
Experiment(s):EBI-885898 | ||
|
Protein |
rplS |
Experiment(s):EBI-885898 | ||
|
Protein |
rplU |
Experiment(s):EBI-885898 | ||
|
Protein |
rplV |
Experiment(s):EBI-885898 | ||
|
Protein |
rplW |
Experiment(s):EBI-885898 | ||
|
Protein |
rplX |
Experiment(s):EBI-885898 | ||
|
Protein |
rpmB |
Experiment(s):EBI-885898 | ||
|
Protein |
rpsE |
Experiment(s):EBI-885898 | ||
|
Protein |
rpsH |
Experiment(s):EBI-885898 | ||
|
Protein |
rpsJ |
Experiment(s):EBI-885898 | ||
|
Protein |
rpsP |
Experiment(s):EBI-885898 | ||
|
Protein |
rpsT |
Experiment(s):EBI-885898 | ||
|
Protein |
yfiF |
Experiment(s):EBI-885898 | ||
|
Protein |
yrfD |
Experiment(s):EBI-885898 | ||
|
Protein |
groL |
Experiment(s):EBI-1139177 | ||
| edit table |
Notes
Localization
See Help:Product_localization for how to add or edit information in this section of EcoliWiki.
| Compartment | Description | Evidence | Source | Notes |
|---|---|---|---|---|
| edit table |
Notes
Structure and Physical Properties
Physical Properties See Help:Product_physical_properties for help entering or editing information about the physical properties of this gene product.
| Sequence |
MPDMKLFAGN ATPELAQRIA NRLYTSLGDA AVGRFSDGEV SVQINENVRG GDIFIIQSTC APTNDNLMEL VVMVDALRRA SAGRITAVIP YFGYARQDRR VRSARVPITA KVVADFLSSV GVDRVLTVDL HAEQIQGFFD VPVDNVFGSP ILLEDMLQLN LDNPIVVSPD IGGVVRARAI AKLLNDTDMA IIDKRRPRAN VSQVMHIIGD VAGRDCVLVD DMIDTGGTLC KAAEALKERG AKRVFAYATH PIFSGNAANN LRNSVIDEVV VCDTIPLSDE IKSLPNVRTL TLSGMLAEAI RRISNEESIS AMFEH |
|---|---|
| Length |
315 |
| Mol. Wt |
34.218 kDa |
| pI |
5.2 (calculated) |
| Extinction coefficient |
5,960 - 6,460 (calc based on 4 Y, W, and 4 C residues) |
| edit table |
Domains/Motifs/Modification Sites
|
See Help:Product_domains_motifs for help entering or editing information in this section of EcoliWiki.
|
<motif_map/> |
|
Structure
|
Structure figures
Notes
Gene Product Resources
See Help:Product_resources for help with entering or editing information in this section of EcoliWiki.
| Resource type | Source | Notes/Reference |
|---|---|---|
| edit table |
Notes
Accessions in Other Databases
See Help:Gene_accessions for help with entering information into the Gene Accessions table.
| Database | Accession | Notes |
|---|---|---|
|
| ||
| edit table |
Notes
Links
| Name | URL | Comments |
|---|---|---|
| edit table |
References
See Help:References for how to manage references in EcoliWiki.
- ↑ 1.0 1.1 1.2 1.3 1.4 1.5 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
- ↑ 2.0 2.1 2.2 2.3 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
- ↑ 4.00 4.01 4.02 4.03 4.04 4.05 4.06 4.07 4.08 4.09 4.10 4.11 4.12 4.13 4.14 4.15 4.16 4.17 4.18 4.19 4.20 4.21 4.22 4.23 4.24 4.25 4.26 4.27 4.28 4.29 4.30 4.31 4.32 4.33 4.34 4.35 4.36 4.37 4.38 Butland, G et al. (2005) Interaction network containing conserved and essential protein complexes in Escherichia coli. Nature 433 531-7 PubMed
- ↑ Arifuzzaman, M et al. (2006) Large-scale identification of protein-protein interaction of Escherichia coli K-12. Genome Res. 16 686-91 PubMed
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