malE:Quickview: Difference between revisions

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!align=left |Standard Name
!align=left {{table_heading_style}} |Standard Name
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''malE''  
''malE''  
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!align=left |Gene Synonym(s)
!align=left {{table_heading_style}} |Gene Synonym(s)
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''ECK4026, b4034, JW3994''<ref name='LIB:Riley_2006'/>
''ECK4026, b4034, JW3994''<ref name='LIB:Riley_2006'/>
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!align=left |Product Desc.
!align=left {{table_heading_style}} |Product Desc.
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MalE<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>;  
MalE<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>;  
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Maltose-binding protein, periplasmic; MBP; substrate recognition for active transport of and chemotaxis toward maltose and maltodextrin<ref name='LIB:EcoGene'/>
Maltose-binding protein, periplasmic; MBP; substrate recognition for active transport of and chemotaxis toward maltose and maltodextrin<ref name='LIB:EcoGene'/>
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!align=left |Product Synonyms(s)
!align=left {{table_heading_style}} |Product Synonyms(s)
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maltose transporter subunit<ref name='LIB:Riley_2006'/>, periplasmic-binding component of ABC superfamily<ref name='LIB:Riley_2006'/>, B4034<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, MalE<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, MBP<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
maltose transporter subunit<ref name='LIB:Riley_2006'/>, periplasmic-binding component of ABC superfamily<ref name='LIB:Riley_2006'/>, B4034<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, MalE<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, MBP<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
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!align=left |Knock-Out Phenotype
!align=left {{table_heading_style}} |Function from GO
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'''Biological Process'''
* GO:0015768 maltose transport ([http://www.geneontology.org/GO.evidence.shtml IDA,IGI])
* GO:0042956 maltodextrin transport ([http://www.geneontology.org/GO.evidence.shtml IMP])
* GO:0006810 transport ([http://www.geneontology.org/GO.evidence.shtml IGI])
* GO:0008643 carbohydrate transport ([http://www.geneontology.org/GO.evidence.shtml IGI])
'''Cellular Component'''
* GO:0043190 ATP-binding cassette (ABC) transporter complex ([http://www.geneontology.org/GO.evidence.shtml IDA,IGI])
* GO:0042597 periplasmic space ([http://www.geneontology.org/GO.evidence.shtml IDA])
* GO:0055052 ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing ([http://www.geneontology.org/GO.evidence.shtml IGI])
'''Molecular Function'''
* GO:0048030 disaccharide binding ([http://www.geneontology.org/GO.evidence.shtml IPI])
* GO:0005215 transporter activity ([http://www.geneontology.org/GO.evidence.shtml IGI])


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!align=left |Regulation/Expression
!align=left {{table_heading_style}} |Knock-Out Phenotype
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!align=left {{table_heading_style}} |Regulation/Expression
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transcription unit(s): [[:Category:Txn_unit:malEFG|malEFG]]<ref name='LIB:EcoCyc10.6'/>, OP00047, malE  
transcription unit(s): [[:Category:Txn_unit:malEFG|malEFG]]<ref name='LIB:EcoCyc10.6'/>, OP00047, malE  
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!align=left |Regulation/Activity
!align=left {{table_heading_style}} |Regulation/Activity
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!align=left {{table_heading_style}} |Quick Links
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[http://ecoliwiki.net/tools/display_dna.php?gene=malE&loc=MG1655:4244442..4243252,W3110:4250009..4248819,DH10B:4344138..4342948,REL606:4225351..4224161 DNA display]&nbsp;&nbsp;&nbsp; [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=4225351&end=4224161&gene=malE&aa=mkiktgarilalsalttmmfsasalakieegklviwingdkgynglaevgkkfekdtgikvtvehpdkleekfpqvaatgdgpdiifwahdrfggyaqsgllaeitpdkafqdklypftwdavryngkliaypiavealsliynkdllpnppktweeipaldkelkakgksalmfnlqepyftwpliaadggyafkyengkydikdvgvdnagakagltflvdliknkhmnadtdysiaeaafnkgetamtingpwawsnidtskvnygvtvlptfkgqpskpfvgvlsaginaaspnkelakeflenylltdegleavnkdkplgavalksyeeelakdpriaatmenaqkgeimpnipqmsafwyavrtavinaasgrqtvdealkdaqtritk Protein display]&nbsp;&nbsp;&nbsp; [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=malE+AND+escherichia+coli Pubmed(malE)]&nbsp;&nbsp;&nbsp; [http://trimer.tamu.edu/cgi-bin/textpresso/2.1/ecoli/search?searchstring=malE Textpresso(malE)]


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Revision as of 23:45, 21 January 2010

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions

See Help:Quickview for help with entering information in the Quickview table.

Standard Name

malE

Gene Synonym(s)

ECK4026, b4034, JW3994[1]

Product Desc.

MalE[2][3];

Component of maltose ABC transporter[2][3]; Maltose/Maltodextrin Transport System[3]

Maltose-binding protein, periplasmic; MBP; substrate recognition for active transport of and chemotaxis toward maltose and maltodextrin[4]

Product Synonyms(s)

maltose transporter subunit[1], periplasmic-binding component of ABC superfamily[1], B4034[2][1], MalE[2][1], MBP[2][1]

Function from GO

Biological Process

Cellular Component

Molecular Function

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): malEFG[2], OP00047, malE

Regulation/Activity
Quick Links

DNA display    Protein display    Pubmed(malE)    Textpresso(malE)

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See Help:Quickview for help with entering information in the Quickview table.

Notes

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Biofilm microarray result was validated with RT-PCR. MalE binds maltose and maltodextrin and mediates chemotaxis through the Tar chemoreceptor. MalT regulon. creBC regulon.Alkali-inducible. Upregulated in biofilms. Downregulated during cold-shock in a pnp-dependent way. Binds TrxA (Kumar, 2004).[4]



References

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See Help:References for how to manage references in EcoliWiki.

  1. ↑ 1.0 1.1 1.2 1.3 1.4 1.5 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 2.5 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ 3.0 3.1 3.2 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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