prs:Gene Product(s): Difference between revisions

Standard name	PrsA
Synonyms	phosphoribosylpyrophosphate synthase^[1], B1207^[2]^[1], DnaR^[2]^[1], Prs^[2]^[1], PrsA^[2]^[1]
Product description	PRPPSYN^[2]^[3]
EC number (for enzymes)	2.7.6.1^[1]
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Notes

Function

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Gene Ontology
See Help:Gene_ontology for help entering or editing GO terms and GO annotations in EcoliWiki.

Qualifier	GO ID	GO term name	Reference(s)	Evidence Code	with/from	Aspect	Notes	Status
	GO:0005515	protein binding	PMID:16606699^[4]	IPI: Inferred from Physical Interaction	UniProtKB:P0A6F5	F	Seeded from EcoCyc 12.5 ^[5]	complete
	GO:0005515	protein binding	PMID:16606699^[4]	IPI: Inferred from Physical Interaction	UniProtKB:P0A7D1	F	Seeded from EcoCyc 12.5 ^[5]	complete
	GO:0005515	protein binding	PMID:16606699^[4]	IPI: Inferred from Physical Interaction	UniProtKB:P0A9Q1	F	Seeded from EcoCyc 12.5 ^[5]	complete
	GO:0005515	protein binding	PMID:16606699^[4]	IPI: Inferred from Physical Interaction	UniProtKB:P0A9T6	F	Seeded from EcoCyc 12.5 ^[5]	complete
	GO:0005515	protein binding	PMID:16606699^[4]	IPI: Inferred from Physical Interaction	UniProtKB:P0AF63	F	Seeded from EcoCyc 12.5 ^[5]	complete
	GO:0005515	protein binding	PMID:16606699^[4]	IPI: Inferred from Physical Interaction	UniProtKB:P13458	F	Seeded from EcoCyc 12.5 ^[5]	complete
	GO:0005515	protein binding	PMID:16606699^[4]	IPI: Inferred from Physical Interaction	UniProtKB:P36767	F	Seeded from EcoCyc 12.5 ^[5]	complete
	GO:0005515	protein binding	PMID:16606699^[4]	IPI: Inferred from Physical Interaction	UniProtKB:P39176	F	Seeded from EcoCyc 12.5 ^[5]	complete
	GO:0005515	protein binding	PMID:16606699^[4]	IPI: Inferred from Physical Interaction	UniProtKB:P60390	F	Seeded from EcoCyc 12.5 ^[5]	complete
	GO:0005515	protein binding	PMID:16606699^[4]	IPI: Inferred from Physical Interaction	UniProtKB:Q47005	F	Seeded from EcoCyc 12.5 ^[5]	complete
	GO:0005515	protein binding	PMID:16606699^[4]	IPI: Inferred from Physical Interaction	UniProtKB:Q47156	F	Seeded from EcoCyc 12.5 ^[5]	complete
	GO:0005737	cytoplasm	PMID:16858726^[6]	IDA: Inferred from Direct Assay		C	Seeded from EcoCyc 12.5 ^[5]	complete
	GO:0046872	metal ion binding	GO_REF:0000004	IEA: Inferred from Electronic Annotation	SP_KW:KW-0479	F	Seeded from EcoCyc 12.5 ^[5]	complete
	GO:0016740	transferase activity	GO_REF:0000004	IEA: Inferred from Electronic Annotation	SP_KW:KW-0808	F	Seeded from EcoCyc 12.5 ^[5]	complete
	GO:0016301	kinase activity	GO_REF:0000004	IEA: Inferred from Electronic Annotation	SP_KW:KW-0418	F	Seeded from EcoCyc 12.5 ^[5]	complete
	GO:0009165	nucleotide biosynthetic process	GO_REF:0000002 GO_REF:0000004	IEA: Inferred from Electronic Annotation	InterPro:IPR005946 SP_KW:KW-0545	P	Seeded from EcoCyc 12.5 ^[5]	complete
	GO:0009156	ribonucleoside monophosphate biosynthetic process	GO_REF:0000002 GO_REF:0000020	IEA: Inferred from Electronic Annotation	InterPro:IPR000842 HAMAP:MF_00583	P	Seeded from EcoCyc 12.5 ^[5]	complete
	GO:0009116	nucleoside metabolic process	GO_REF:0000002	IEA: Inferred from Electronic Annotation	InterPro:IPR000836	P	Seeded from EcoCyc 12.5 ^[5]	complete
	GO:0005737	cytoplasm	GO_REF:0000004	IEA: Inferred from Electronic Annotation	SP_KW:KW-0963	C	Seeded from EcoCyc 12.5 ^[5]	complete
	GO:0004749	ribose phosphate diphosphokinase activity	GO_REF:0000002 GO_REF:0000002 GO_REF:0000003 GO_REF:0000020	IEA: Inferred from Electronic Annotation	InterPro:IPR000842 InterPro:IPR005946 EC:2.7.6.1 HAMAP:MF_00583	F	Seeded from EcoCyc 12.5 ^[5]	complete
	GO:0000287	magnesium ion binding	GO_REF:0000002 GO_REF:0000002 GO_REF:0000004 GO_REF:0000020	IEA: Inferred from Electronic Annotation	InterPro:IPR000842 InterPro:IPR005946 SP_KW:KW-0460 HAMAP:MF_00583	F	Seeded from EcoCyc 12.5 ^[5]	complete
	GO:0009152	purine ribonucleotide biosynthetic process				P	Seeded from EcoCyc 11.1^[3].	required fields missing
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Interactions See Help:Product_interactions for help entering or editing information about gene product interactions in this section of EcoliWiki.

Partner Type	Partner	References	Evidence
Protein	npdA	PMID:15690043^[7]	Experiment(s):EBI-880430, EBI-881344, EBI-885898
Protein	dnaJ	PMID:15690043^[7]	Experiment(s):EBI-880430, EBI-885898
Protein	dnaK	PMID:15690043^[7]	Experiment(s):EBI-880430
Protein	groL	PMID:15690043^[7]	Experiment(s):EBI-880430, EBI-885898
Protein	mreB	PMID:15690043^[7]	Experiment(s):EBI-880430
Protein	rplB	PMID:15690043^[7]	Experiment(s):EBI-880430, EBI-885898
Protein	rplE	PMID:15690043^[7]	Experiment(s):EBI-880430
Protein	rplJ	PMID:15690043^[7]	Experiment(s):EBI-880430
Protein	rplP	PMID:15690043^[7]	Experiment(s):EBI-880430, EBI-885898
Protein	rpsB	PMID:15690043^[7]	Experiment(s):EBI-880430, EBI-885898
Protein	rpsC	PMID:15690043^[7]	Experiment(s):EBI-880430, EBI-885898
Protein	rpsD	PMID:15690043^[7]	Experiment(s):EBI-880430, EBI-885898
Protein	rpsG	PMID:15690043^[7]	Experiment(s):EBI-880430, EBI-885898
Protein	tufA	PMID:15690043^[7]	Experiment(s):EBI-880430, EBI-885898
Protein	rluB	PMID:15690043^[7]	Experiment(s):EBI-880430
Protein	yibA	PMID:15690043^[7]	Experiment(s):EBI-880430
Protein	nusG	PMID:15690043^[7]	Experiment(s):EBI-885898
Protein	rho	PMID:15690043^[7]	Experiment(s):EBI-885898
Protein	rplC	PMID:15690043^[7]	Experiment(s):EBI-885898
Protein	rplD	PMID:15690043^[7]	Experiment(s):EBI-885898
Protein	rplI	PMID:15690043^[7]	Experiment(s):EBI-885898
Protein	rplK	PMID:15690043^[7]	Experiment(s):EBI-885898
Protein	rplL	PMID:15690043^[7]	Experiment(s):EBI-885898
Protein	rplM	PMID:15690043^[7]	Experiment(s):EBI-885898
Protein	rplN	PMID:15690043^[7]	Experiment(s):EBI-885898
Protein	rplO	PMID:15690043^[7]	Experiment(s):EBI-885898
Protein	rplS	PMID:15690043^[7]	Experiment(s):EBI-885898
Protein	rplU	PMID:15690043^[7]	Experiment(s):EBI-885898
Protein	rplV	PMID:15690043^[7]	Experiment(s):EBI-885898
Protein	rplW	PMID:15690043^[7]	Experiment(s):EBI-885898
Protein	rplX	PMID:15690043^[7]	Experiment(s):EBI-885898
Protein	rpmB	PMID:15690043^[7]	Experiment(s):EBI-885898
Protein	rpsE	PMID:15690043^[7]	Experiment(s):EBI-885898
Protein	rpsH	PMID:15690043^[7]	Experiment(s):EBI-885898
Protein	rpsJ	PMID:15690043^[7]	Experiment(s):EBI-885898
Protein	rpsP	PMID:15690043^[7]	Experiment(s):EBI-885898
Protein	rpsT	PMID:15690043^[7]	Experiment(s):EBI-885898
Protein	yfiF	PMID:15690043^[7]	Experiment(s):EBI-885898
Protein	yrfD	PMID:15690043^[7]	Experiment(s):EBI-885898
Protein	groL	PMID:16606699^[4]	Experiment(s):EBI-1139177
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Notes

Localization

See Help:Product_localization for how to add or edit information in this section of EcoliWiki.

Compartment	Description	Evidence	Notes
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Notes

Structure and Physical Properties

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Physical Properties See Help:Product_physical_properties for help entering or editing information about the physical properties of this gene product.

Sequence	at EcoCyc MPDMKLFAGN ATPELAQRIA NRLYTSLGDA AVGRFSDGEV SVQINENVRG GDIFIIQSTC APTNDNLMEL VVMVDALRRA SAGRITAVIP YFGYARQDRR VRSARVPITA KVVADFLSSV GVDRVLTVDL HAEQIQGFFD VPVDNVFGSP ILLEDMLQLN LDNPIVVSPD IGGVVRARAI AKLLNDTDMA IIDKRRPRAN VSQVMHIIGD VAGRDCVLVD DMIDTGGTLC KAAEALKERG AKRVFAYATH PIFSGNAANN LRNSVIDEVV VCDTIPLSDE IKSLPNVRTL TLSGMLAEAI RRISNEESIS AMFEH
Mol. Wt	34.22 kDa (calc) ^[2]
pI	5.52^[2]
Extinction coefficient	5960 - 6460 (calc based on 4 Y, 0 W, and 4 C residues)
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Domains/Motifs/Modification Sites See Help:Product_domains_motifs for help entering or editing information in this section of EcoliWiki.

Type	Residues	Description	Notes
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Structure See Help:Product_structure for help entering or editing information in this section of EcoliWiki.

Structures

Models

View models at:

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Notes

Gene Product Resources

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See Help:Product_resources for help with entering or editing information in this section of EcoliWiki.

Resource type	Source	Notes/Reference
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Notes

Accessions in Other Databases

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database	Accession	Notes
EcoCyc (EcoliWiki Page)	EcoCyc:PRPPSYN-MONOMER
SwissModel (EcoliWiki Page)	SwissModel:P0A717
UniProt (EcoliWiki Page)	UniProt:P0A717
PFAM (EcoliWiki Page)	PFAM:PF00156
RefSeq (EcoliWiki Page)	RefSeq:NP_415725
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Notes

Links

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Name	URL	Comments
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References

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↑ ^1.0 ^1.1 ^1.2 ^1.3 ^1.4 ^1.5 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
↑ ^2.0 ^2.1 ^2.2 ^2.3 ^2.4 ^2.5 ^2.6 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
↑ ^3.0 ^3.1 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
↑ ^4.00 ^4.01 ^4.02 ^4.03 ^4.04 ^4.05 ^4.06 ^4.07 ^4.08 ^4.09 ^4.10 ^4.11 Arifuzzaman, M et al. (2006) Large-scale identification of protein-protein interaction of Escherichia coli K-12. Genome Res. 16 686-91 PubMed
↑ ^5.00 ^5.01 ^5.02 ^5.03 ^5.04 ^5.05 ^5.06 ^5.07 ^5.08 ^5.09 ^5.10 ^5.11 ^5.12 ^5.13 ^5.14 ^5.15 ^5.16 ^5.17 ^5.18 ^5.19 ^5.20 EcoCyc (release 12.5; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
↑ Lasserre, JP et al. (2006) A complexomic study of Escherichia coli using two-dimensional blue native/SDS polyacrylamide gel electrophoresis. Electrophoresis 27 3306-21 PubMed
↑ ^7.00 ^7.01 ^7.02 ^7.03 ^7.04 ^7.05 ^7.06 ^7.07 ^7.08 ^7.09 ^7.10 ^7.11 ^7.12 ^7.13 ^7.14 ^7.15 ^7.16 ^7.17 ^7.18 ^7.19 ^7.20 ^7.21 ^7.22 ^7.23 ^7.24 ^7.25 ^7.26 ^7.27 ^7.28 ^7.29 ^7.30 ^7.31 ^7.32 ^7.33 ^7.34 ^7.35 ^7.36 ^7.37 ^7.38 Butland, G et al. (2005) Interaction network containing conserved and essential protein complexes in Escherichia coli. Nature 433 531-7 PubMed

prs:Gene Product(s): Difference between revisions

Revision as of 20:55, 16 February 2009

Nomenclature

Notes

Function

Notes

Localization

Notes

Structure and Physical Properties

Notes

Gene Product Resources

Notes

Accessions in Other Databases

Notes

Links

References

Categories

Navigation menu

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-[[Category:GO:0005515_!_protein_binding]][http://gowiki.tamu.edu/wiki/index.php/Category:GO:0005515_!_protein_binding GO:0005515]
+GO:0005515
 |
 protein binding
-|[[PMID:16606699]]<ref name=PMID:16606699/>
+|
+PMID:16606699
 |
 IPI: Inferred from Physical Interaction
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-[http://www.uniprot.org/uniprot/P0A6F5 UniProtKB:P0A6F5]
+UniProtKB:P0A6F5
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 F
@@ Line 99: / Line 100: @@
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-[[Category:GO:0005515_!_protein_binding]][http://gowiki.tamu.edu/wiki/index.php/Category:GO:0005515_!_protein_binding GO:0005515]
+GO:0005515
 |
 protein binding
-|[[PMID:16606699]]<ref name=PMID:16606699/>
+|
+PMID:16606699
 |
 IPI: Inferred from Physical Interaction
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-[http://www.uniprot.org/uniprot/P0A7D1 UniProtKB:P0A7D1]
+UniProtKB:P0A7D1
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 F
@@ Line 117: / Line 119: @@
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-[[Category:GO:0005515_!_protein_binding]][http://gowiki.tamu.edu/wiki/index.php/Category:GO:0005515_!_protein_binding GO:0005515]
+GO:0005515
 |
 protein binding
-|[[PMID:16606699]]<ref name=PMID:16606699/>
+|
+PMID:16606699
 |
 IPI: Inferred from Physical Interaction
 |
-[http://www.uniprot.org/uniprot/P0A9Q1 UniProtKB:P0A9Q1]
+UniProtKB:P0A9Q1
 |
 F
@@ Line 135: / Line 138: @@
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-[[Category:GO:0005515_!_protein_binding]][http://gowiki.tamu.edu/wiki/index.php/Category:GO:0005515_!_protein_binding GO:0005515]
+GO:0005515
 |
 protein binding
-|[[PMID:16606699]]<ref name=PMID:16606699/>
+|
+PMID:16606699
 |
 IPI: Inferred from Physical Interaction
 |
-[http://www.uniprot.org/uniprot/P0A9T6 UniProtKB:P0A9T6]
+UniProtKB:P0A9T6
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 F
@@ Line 153: / Line 157: @@
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-[[Category:GO:0005515_!_protein_binding]][http://gowiki.tamu.edu/wiki/index.php/Category:GO:0005515_!_protein_binding GO:0005515]
+GO:0005515
 |
 protein binding
-|[[PMID:16606699]]<ref name=PMID:16606699/>
+|
+PMID:16606699
 |
 IPI: Inferred from Physical Interaction
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-[http://www.uniprot.org/uniprot/P0AF63 UniProtKB:P0AF63]
+UniProtKB:P0AF63
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 F
@@ Line 171: / Line 176: @@
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-[[Category:GO:0005515_!_protein_binding]][http://gowiki.tamu.edu/wiki/index.php/Category:GO:0005515_!_protein_binding GO:0005515]
+GO:0005515
 |
 protein binding
-|[[PMID:16606699]]<ref name=PMID:16606699/>
+|
+PMID:16606699
 |
 IPI: Inferred from Physical Interaction
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-[http://www.uniprot.org/uniprot/P13458 UniProtKB:P13458]
+UniProtKB:P13458
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 F
@@ Line 189: / Line 195: @@
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-[[Category:GO:0005515_!_protein_binding]][http://gowiki.tamu.edu/wiki/index.php/Category:GO:0005515_!_protein_binding GO:0005515]
+GO:0005515
 |
 protein binding
-|[[PMID:16606699]]<ref name=PMID:16606699/>
+|
+PMID:16606699
 |
 IPI: Inferred from Physical Interaction
 |
-[http://www.uniprot.org/uniprot/P36767 UniProtKB:P36767]
+UniProtKB:P36767
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 F
@@ Line 207: / Line 214: @@
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-[[Category:GO:0005515_!_protein_binding]][http://gowiki.tamu.edu/wiki/index.php/Category:GO:0005515_!_protein_binding GO:0005515]
+GO:0005515
 |
 protein binding
-|[[PMID:16606699]]<ref name=PMID:16606699/>
+|
+PMID:16606699
 |
 IPI: Inferred from Physical Interaction
 |
-[http://www.uniprot.org/uniprot/P39176 UniProtKB:P39176]
+UniProtKB:P39176
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 F
@@ Line 225: / Line 233: @@
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-[[Category:GO:0005515_!_protein_binding]][http://gowiki.tamu.edu/wiki/index.php/Category:GO:0005515_!_protein_binding GO:0005515]
+GO:0005515
 |
 protein binding
-|[[PMID:16606699]]<ref name=PMID:16606699/>
+|
+PMID:16606699
 |
 IPI: Inferred from Physical Interaction
 |
-[http://www.uniprot.org/uniprot/P60390 UniProtKB:P60390]
+UniProtKB:P60390
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 F
@@ Line 243: / Line 252: @@
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-[[Category:GO:0005515_!_protein_binding]][http://gowiki.tamu.edu/wiki/index.php/Category:GO:0005515_!_protein_binding GO:0005515]
+GO:0005515
 |
 protein binding
-|[[PMID:16606699]]<ref name=PMID:16606699/>
+|
+PMID:16606699
 |
 IPI: Inferred from Physical Interaction
 |
-[http://www.uniprot.org/uniprot/Q47005 UniProtKB:Q47005]
+UniProtKB:Q47005
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 F
@@ Line 261: / Line 271: @@
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-[[Category:GO:0005515_!_protein_binding]][http://gowiki.tamu.edu/wiki/index.php/Category:GO:0005515_!_protein_binding GO:0005515]
+GO:0005515
 |
 protein binding
-|[[PMID:16606699]]<ref name=PMID:16606699/>
+|
+PMID:16606699
 |
 IPI: Inferred from Physical Interaction
 |
-[http://www.uniprot.org/uniprot/Q47156 UniProtKB:Q47156]
+UniProtKB:Q47156
 |
 F
@@ Line 279: / Line 290: @@
 |
-[[Category:GO:0005737_!_cytoplasm]][http://gowiki.tamu.edu/wiki/index.php/Category:GO:0005737_!_cytoplasm GO:0005737]
+GO:0005737
 |
 cytoplasm
-|[[PMID:16858726]]<ref name=PMID:16858726/>
+|
+PMID:16858726
 |
 IDA: Inferred from Direct Assay
@@ Line 297: / Line 309: @@
 |
-[[Category:GO:0046872_!_metal_ion_binding]][http://gowiki.tamu.edu/wiki/index.php/Category:GO:0046872_!_metal_ion_binding GO:0046872]
+GO:0046872
 |
 metal ion binding
 |
-[http://www.geneontology.org/cgi-bin/references.cgi#GO_REF:0000004 GO_REF:0000004]
+GO_REF:0000004
 |
 IEA: Inferred from Electronic Annotation
 |
-[http://www.uniprot.org/keywords/KW-0479 SP_KW:KW-0479]
+SP_KW:KW-0479
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 F
@@ Line 316: / Line 328: @@
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-[[Category:GO:0016740_!_transferase_activity]][http://gowiki.tamu.edu/wiki/index.php/Category:GO:0016740_!_transferase_activity GO:0016740]
+GO:0016740
 |
 transferase activity
 |
-[http://www.geneontology.org/cgi-bin/references.cgi#GO_REF:0000004 GO_REF:0000004]
+GO_REF:0000004
 |
 IEA: Inferred from Electronic Annotation
 |
-[http://www.uniprot.org/keywords/KW-0808 SP_KW:KW-0808]
+SP_KW:KW-0808
 |
 F
@@ Line 335: / Line 347: @@
 |
-[[Category:GO:0016301_!_kinase_activity]][http://gowiki.tamu.edu/wiki/index.php/Category:GO:0016301_!_kinase_activity GO:0016301]
+GO:0016301
 |
 kinase activity
 |
-[http://www.geneontology.org/cgi-bin/references.cgi#GO_REF:0000004 GO_REF:0000004]
+GO_REF:0000004
 |
 IEA: Inferred from Electronic Annotation
 |
-[http://www.uniprot.org/keywords/KW-0418 SP_KW:KW-0418]
+SP_KW:KW-0418
 |
 F
@@ Line 354: / Line 366: @@
 |
-[[Category:GO:0009165_!_nucleotide_biosynthetic_process]][http://gowiki.tamu.edu/wiki/index.php/Category:GO:0009165_!_nucleotide_biosynthetic_process GO:0009165]
+GO:0009165
 |
 nucleotide biosynthetic process
 |
-[http://www.geneontology.org/cgi-bin/references.cgi#GO_REF:0000002 GO_REF:0000002]<br />[http://www.geneontology.org/cgi-bin/references.cgi#GO_REF:0000004 GO_REF:0000004]
+GO_REF:0000002<br />GO_REF:0000004
 |
 IEA: Inferred from Electronic Annotation
 |
-[http://www.ebi.ac.uk/interpro/DisplayIproEntry?ac=IPR005946 InterPro:IPR005946]<br />[http://www.uniprot.org/keywords/KW-0545 SP_KW:KW-0545]
+InterPro:IPR005946<br />SP_KW:KW-0545
 |
 P
@@ Line 373: / Line 385: @@
 |
-[[Category:GO:0009156_!_ribonucleoside_monophosphate_biosynthetic_process]][http://gowiki.tamu.edu/wiki/index.php/Category:GO:0009156_!_ribonucleoside_monophosphate_biosynthetic_process GO:0009156]
+GO:0009156
 |
 ribonucleoside monophosphate biosynthetic process
 |
-[http://www.geneontology.org/cgi-bin/references.cgi#GO_REF:0000002 GO_REF:0000002]<br />[http://www.geneontology.org/cgi-bin/references.cgi#GO_REF:0000020 GO_REF:0000020]
+GO_REF:0000002<br />GO_REF:0000020
 |
 IEA: Inferred from Electronic Annotation
 |
-[http://www.ebi.ac.uk/interpro/DisplayIproEntry?ac=IPR000842 InterPro:IPR000842]<br />[http://ca.expasy.org/unirule/MF_00583 HAMAP:MF_00583]
+InterPro:IPR000842<br />HAMAP:MF_00583
 |
 P
@@ Line 392: / Line 404: @@
 |
-[[Category:GO:0009116_!_nucleoside_metabolic_process]][http://gowiki.tamu.edu/wiki/index.php/Category:GO:0009116_!_nucleoside_metabolic_process GO:0009116]
+GO:0009116
 |
 nucleoside metabolic process
 |
-[http://www.geneontology.org/cgi-bin/references.cgi#GO_REF:0000002 GO_REF:0000002]
+GO_REF:0000002
 |
 IEA: Inferred from Electronic Annotation
 |
-[http://www.ebi.ac.uk/interpro/DisplayIproEntry?ac=IPR000836 InterPro:IPR000836]
+InterPro:IPR000836
 |
 P
@@ Line 411: / Line 423: @@
 |
-[[Category:GO:0005737_!_cytoplasm]][http://gowiki.tamu.edu/wiki/index.php/Category:GO:0005737_!_cytoplasm GO:0005737]
+GO:0005737
 |
 cytoplasm
 |
-[http://www.geneontology.org/cgi-bin/references.cgi#GO_REF:0000004 GO_REF:0000004]
+GO_REF:0000004
 |
 IEA: Inferred from Electronic Annotation
 |
-[http://www.uniprot.org/keywords/KW-0963 SP_KW:KW-0963]
+SP_KW:KW-0963
 |
 C
@@ Line 430: / Line 442: @@
 |
-[[Category:GO:0004749_!_ribose_phosphate_diphosphokinase_activity]][http://gowiki.tamu.edu/wiki/index.php/Category:GO:0004749_!_ribose_phosphate_diphosphokinase_activity GO:0004749]
+GO:0004749
 |
 ribose phosphate diphosphokinase activity
 |
-[http://www.geneontology.org/cgi-bin/references.cgi#GO_REF:0000002 GO_REF:0000002]<br />[http://www.geneontology.org/cgi-bin/references.cgi#GO_REF:0000002 GO_REF:0000002]<br />[http://www.geneontology.org/cgi-bin/references.cgi#GO_REF:0000003 GO_REF:0000003]<br />[http://www.geneontology.org/cgi-bin/references.cgi#GO_REF:0000020 GO_REF:0000020]
+GO_REF:0000002<br />GO_REF:0000002<br />GO_REF:0000003<br />GO_REF:0000020
 |
 IEA: Inferred from Electronic Annotation
 |
-[http://www.ebi.ac.uk/interpro/DisplayIproEntry?ac=IPR000842 InterPro:IPR000842]<br />[http://www.ebi.ac.uk/interpro/DisplayIproEntry?ac=IPR005946 InterPro:IPR005946]<br />[http://www.expasy.org/cgi-bin/nicezyme.pl?2.7.6.1 EC:2.7.6.1]<br />[http://ca.expasy.org/unirule/MF_00583 HAMAP:MF_00583]
+InterPro:IPR000842<br />InterPro:IPR005946<br />EC:2.7.6.1<br />HAMAP:MF_00583
 |
 F
@@ Line 449: / Line 461: @@
 |
-[[Category:GO:0000287_!_magnesium_ion_binding]][http://gowiki.tamu.edu/wiki/index.php/Category:GO:0000287_!_magnesium_ion_binding GO:0000287]
+GO:0000287
 |
 magnesium ion binding
 |
-[http://www.geneontology.org/cgi-bin/references.cgi#GO_REF:0000002 GO_REF:0000002]<br />[http://www.geneontology.org/cgi-bin/references.cgi#GO_REF:0000002 GO_REF:0000002]<br />[http://www.geneontology.org/cgi-bin/references.cgi#GO_REF:0000004 GO_REF:0000004]<br />[http://www.geneontology.org/cgi-bin/references.cgi#GO_REF:0000020 GO_REF:0000020]
+GO_REF:0000002<br />GO_REF:0000002<br />GO_REF:0000004<br />GO_REF:0000020
 |
 IEA: Inferred from Electronic Annotation
 |
-[http://www.ebi.ac.uk/interpro/DisplayIproEntry?ac=IPR000842 InterPro:IPR000842]<br />[http://www.ebi.ac.uk/interpro/DisplayIproEntry?ac=IPR005946 InterPro:IPR005946]<br />[http://www.uniprot.org/keywords/KW-0460 SP_KW:KW-0460]<br />[http://ca.expasy.org/unirule/MF_00583 HAMAP:MF_00583]
+InterPro:IPR000842<br />InterPro:IPR005946<br />SP_KW:KW-0460<br />HAMAP:MF_00583
 |
 F
@@ Line 468: / Line 480: @@
 |
-[[Category:GO:0009152_!_purine_ribonucleotide_biosynthetic_process]][http://gowiki.tamu.edu/wiki/index.php/Category:GO:0009152_!_purine_ribonucleotide_biosynthetic_process GO:0009152]
+GO:0009152
 |
 purine ribonucleotide biosynthetic process
@@ Line 504: / Line 516: @@
 Protein
 |
-[[npdA:Gene_Product(s)|npdA]]<br />
+npdA<br />
 |
-|[[PMID:15690043]]<ref name=PMID:15690043/>
 |
-Experiment(s):[http://www.ebi.ac.uk/iintact/search/do/search?searchString=EBI-880430 EBI-880430], [http://www.ebi.ac.uk/iintact/search/do/search?searchString=EBI-881344 EBI-881344], [http://www.ebi.ac.uk/iintact/search/do/search?searchString=EBI-885898 EBI-885898]<br />
+PMID:15690043
+|
+Experiment(s):EBI-880430, EBI-881344, EBI-885898<br />
 |-
 |
 Protein
 |
-[[dnaJ:Gene_Product(s)|dnaJ]]<br />
+dnaJ<br />
 |
-|[[PMID:15690043]]<ref name=PMID:15690043/>
 |
-Experiment(s):[http://www.ebi.ac.uk/iintact/search/do/search?searchString=EBI-880430 EBI-880430], [http://www.ebi.ac.uk/iintact/search/do/search?searchString=EBI-885898 EBI-885898]<br />
+PMID:15690043
+|
+Experiment(s):EBI-880430, EBI-885898<br />
 |-
 |
 Protein
 |
-[[dnaK:Gene_Product(s)|dnaK]]<br />
+dnaK<br />
 |
-|[[PMID:15690043]]<ref name=PMID:15690043/>
 |
-Experiment(s):[http://www.ebi.ac.uk/iintact/search/do/search?searchString=EBI-880430 EBI-880430]<br />
+PMID:15690043
+|
+Experiment(s):EBI-880430<br />
 |-
 |
 Protein
 |
-[[groL:Gene_Product(s)|groL]]<br />
+groL<br />
 |
-|[[PMID:15690043]]<ref name=PMID:15690043/>
 |
-Experiment(s):[http://www.ebi.ac.uk/iintact/search/do/search?searchString=EBI-880430 EBI-880430], [http://www.ebi.ac.uk/iintact/search/do/search?searchString=EBI-885898 EBI-885898]<br />
+PMID:15690043
+|
+Experiment(s):EBI-880430, EBI-885898<br />
 |-
 |
 Protein
 |
-[[mreB:Gene_Product(s)|mreB]]<br />
+mreB<br />
 |
-|[[PMID:15690043]]<ref name=PMID:15690043/>
 |
-Experiment(s):[http://www.ebi.ac.uk/iintact/search/do/search?searchString=EBI-880430 EBI-880430]<br />
+PMID:15690043
+|
+Experiment(s):EBI-880430<br />
 |-
 |
 Protein
 |
-[[rplB:Gene_Product(s)|rplB]]<br />
+rplB<br />
 |
-|[[PMID:15690043]]<ref name=PMID:15690043/>
 |
-Experiment(s):[http://www.ebi.ac.uk/iintact/search/do/search?searchString=EBI-880430 EBI-880430], [http://www.ebi.ac.uk/iintact/search/do/search?searchString=EBI-885898 EBI-885898]<br />
+PMID:15690043
+|
+Experiment(s):EBI-880430, EBI-885898<br />
 |-
 |
 Protein
 |
-[[rplE:Gene_Product(s)|rplE]]<br />
+rplE<br />
 |
-|[[PMID:15690043]]<ref name=PMID:15690043/>
 |
-Experiment(s):[http://www.ebi.ac.uk/iintact/search/do/search?searchString=EBI-880430 EBI-880430]<br />
+PMID:15690043
+|
+Experiment(s):EBI-880430<br />
 |-
 |
 Protein
 |
-[[rplJ:Gene_Product(s)|rplJ]]<br />
+rplJ<br />
 |
-|[[PMID:15690043]]<ref name=PMID:15690043/>
 |
-Experiment(s):[http://www.ebi.ac.uk/iintact/search/do/search?searchString=EBI-880430 EBI-880430]<br />
+PMID:15690043
+|
+Experiment(s):EBI-880430<br />
 |-
 |
 Protein
 |
-[[rplP:Gene_Product(s)|rplP]]<br />
+rplP<br />
 |
-|[[PMID:15690043]]<ref name=PMID:15690043/>
 |
-Experiment(s):[http://www.ebi.ac.uk/iintact/search/do/search?searchString=EBI-880430 EBI-880430], [http://www.ebi.ac.uk/iintact/search/do/search?searchString=EBI-885898 EBI-885898]<br />
+PMID:15690043
+|
+Experiment(s):EBI-880430, EBI-885898<br />
 |-
 |
 Protein
 |
-[[rpsB:Gene_Product(s)|rpsB]]<br />
+rpsB<br />
 |
-|[[PMID:15690043]]<ref name=PMID:15690043/>
 |
-Experiment(s):[http://www.ebi.ac.uk/iintact/search/do/search?searchString=EBI-880430 EBI-880430], [http://www.ebi.ac.uk/iintact/search/do/search?searchString=EBI-885898 EBI-885898]<br />
+PMID:15690043
+|
+Experiment(s):EBI-880430, EBI-885898<br />
 |-
 |
 Protein
 |
-[[rpsC:Gene_Product(s)|rpsC]]<br />
+rpsC<br />
 |
-|[[PMID:15690043]]<ref name=PMID:15690043/>
 |
-Experiment(s):[http://www.ebi.ac.uk/iintact/search/do/search?searchString=EBI-880430 EBI-880430], [http://www.ebi.ac.uk/iintact/search/do/search?searchString=EBI-885898 EBI-885898]<br />
+PMID:15690043
+|
+Experiment(s):EBI-880430, EBI-885898<br />
 |-
 |
 Protein
 |
-[[rpsD:Gene_Product(s)|rpsD]]<br />
+rpsD<br />
 |
-|[[PMID:15690043]]<ref name=PMID:15690043/>
 |
-Experiment(s):[http://www.ebi.ac.uk/iintact/search/do/search?searchString=EBI-880430 EBI-880430], [http://www.ebi.ac.uk/iintact/search/do/search?searchString=EBI-885898 EBI-885898]<br />
+PMID:15690043
+|
+Experiment(s):EBI-880430, EBI-885898<br />
 |-
 |
 Protein
 |
-[[rpsG:Gene_Product(s)|rpsG]]<br />
+rpsG<br />
 |
-|[[PMID:15690043]]<ref name=PMID:15690043/>
 |
-Experiment(s):[http://www.ebi.ac.uk/iintact/search/do/search?searchString=EBI-880430 EBI-880430], [http://www.ebi.ac.uk/iintact/search/do/search?searchString=EBI-885898 EBI-885898]<br />
+PMID:15690043
+|
+Experiment(s):EBI-880430, EBI-885898<br />
 |-
 |
 Protein
 |
-[[tufA:Gene_Product(s)|tufA]]<br />
+tufA<br />
 |
-|[[PMID:15690043]]<ref name=PMID:15690043/>
 |
-Experiment(s):[http://www.ebi.ac.uk/iintact/search/do/search?searchString=EBI-880430 EBI-880430], [http://www.ebi.ac.uk/iintact/search/do/search?searchString=EBI-885898 EBI-885898]<br />
+PMID:15690043
+|
+Experiment(s):EBI-880430, EBI-885898<br />
 |-
 |
 Protein
 |
-[[rluB:Gene_Product(s)|rluB]]<br />
+rluB<br />
 |
-|[[PMID:15690043]]<ref name=PMID:15690043/>
 |
-Experiment(s):[http://www.ebi.ac.uk/iintact/search/do/search?searchString=EBI-880430 EBI-880430]<br />
+PMID:15690043
+|
+Experiment(s):EBI-880430<br />
 |-
 |
 Protein
 |
-[[yibA:Gene_Product(s)|yibA]]<br />
+yibA<br />
 |
-|[[PMID:15690043]]<ref name=PMID:15690043/>
 |
-Experiment(s):[http://www.ebi.ac.uk/iintact/search/do/search?searchString=EBI-880430 EBI-880430]<br />
+PMID:15690043
+|
+Experiment(s):EBI-880430<br />
 |-
 |
 Protein
 |
-[[nusG:Gene_Product(s)|nusG]]<br />
+nusG<br />
 |
-|[[PMID:15690043]]<ref name=PMID:15690043/>
 |
-Experiment(s):[http://www.ebi.ac.uk/iintact/search/do/search?searchString=EBI-885898 EBI-885898]<br />
+PMID:15690043
+|
+Experiment(s):EBI-885898<br />
 |-
 |
 Protein
 |
-[[rho:Gene_Product(s)|rho]]<br />
+rho<br />
 |
-|[[PMID:15690043]]<ref name=PMID:15690043/>
 |
-Experiment(s):[http://www.ebi.ac.uk/iintact/search/do/search?searchString=EBI-885898 EBI-885898]<br />
+PMID:15690043
+|
+Experiment(s):EBI-885898<br />
 |-
 |
 Protein
 |
-[[rplC:Gene_Product(s)|rplC]]<br />
+rplC<br />
 |
-|[[PMID:15690043]]<ref name=PMID:15690043/>
 |
-Experiment(s):[http://www.ebi.ac.uk/iintact/search/do/search?searchString=EBI-885898 EBI-885898]<br />
+PMID:15690043
+|
+Experiment(s):EBI-885898<br />
 |-
 |
 Protein
 |
-[[rplD:Gene_Product(s)|rplD]]<br />
+rplD<br />
 |
-|[[PMID:15690043]]<ref name=PMID:15690043/>
 |
-Experiment(s):[http://www.ebi.ac.uk/iintact/search/do/search?searchString=EBI-885898 EBI-885898]<br />
+PMID:15690043
+|
+Experiment(s):EBI-885898<br />
 |-
 |
 Protein
 |
-[[rplI:Gene_Product(s)|rplI]]<br />
+rplI<br />
 |
-|[[PMID:15690043]]<ref name=PMID:15690043/>
 |
-Experiment(s):[http://www.ebi.ac.uk/iintact/search/do/search?searchString=EBI-885898 EBI-885898]<br />
+PMID:15690043
+|
+Experiment(s):EBI-885898<br />
 |-
 |
 Protein
 |
-[[rplK:Gene_Product(s)|rplK]]<br />
+rplK<br />
 |
-|[[PMID:15690043]]<ref name=PMID:15690043/>
 |
-Experiment(s):[http://www.ebi.ac.uk/iintact/search/do/search?searchString=EBI-885898 EBI-885898]<br />
+PMID:15690043
+|
+Experiment(s):EBI-885898<br />
 |-
 |
 Protein
 |
-[[rplL:Gene_Product(s)|rplL]]<br />
+rplL<br />
 |
-|[[PMID:15690043]]<ref name=PMID:15690043/>
 |
-Experiment(s):[http://www.ebi.ac.uk/iintact/search/do/search?searchString=EBI-885898 EBI-885898]<br />
+PMID:15690043
+|
+Experiment(s):EBI-885898<br />
 |-
 |
 Protein
 |
-[[rplM:Gene_Product(s)|rplM]]<br />
+rplM<br />
 |
-|[[PMID:15690043]]<ref name=PMID:15690043/>
 |
-Experiment(s):[http://www.ebi.ac.uk/iintact/search/do/search?searchString=EBI-885898 EBI-885898]<br />
+PMID:15690043
+|
+Experiment(s):EBI-885898<br />
 |-
 |
 Protein
 |
-[[rplN:Gene_Product(s)|rplN]]<br />
+rplN<br />
 |
-|[[PMID:15690043]]<ref name=PMID:15690043/>
 |
-Experiment(s):[http://www.ebi.ac.uk/iintact/search/do/search?searchString=EBI-885898 EBI-885898]<br />
+PMID:15690043
+|
+Experiment(s):EBI-885898<br />
 |-
 |
 Protein
 |
-[[rplO:Gene_Product(s)|rplO]]<br />
+rplO<br />
 |
-|[[PMID:15690043]]<ref name=PMID:15690043/>
 |
-Experiment(s):[http://www.ebi.ac.uk/iintact/search/do/search?searchString=EBI-885898 EBI-885898]<br />
+PMID:15690043
+|
+Experiment(s):EBI-885898<br />
 |-
 |
 Protein
 |
-[[rplS:Gene_Product(s)|rplS]]<br />
+rplS<br />
 |
-|[[PMID:15690043]]<ref name=PMID:15690043/>
 |
-Experiment(s):[http://www.ebi.ac.uk/iintact/search/do/search?searchString=EBI-885898 EBI-885898]<br />
+PMID:15690043
+|
+Experiment(s):EBI-885898<br />
 |-
 |
 Protein
 |
-[[rplU:Gene_Product(s)|rplU]]<br />
+rplU<br />
 |
-|[[PMID:15690043]]<ref name=PMID:15690043/>
 |
-Experiment(s):[http://www.ebi.ac.uk/iintact/search/do/search?searchString=EBI-885898 EBI-885898]<br />
+PMID:15690043
+|
+Experiment(s):EBI-885898<br />
 |-
 |
 Protein
 |
-[[rplV:Gene_Product(s)|rplV]]<br />
+rplV<br />
 |
-|[[PMID:15690043]]<ref name=PMID:15690043/>
 |
-Experiment(s):[http://www.ebi.ac.uk/iintact/search/do/search?searchString=EBI-885898 EBI-885898]<br />
+PMID:15690043
+|
+Experiment(s):EBI-885898<br />
 |-
 |
 Protein
 |
-[[rplW:Gene_Product(s)|rplW]]<br />
+rplW<br />
 |
-|[[PMID:15690043]]<ref name=PMID:15690043/>
 |
-Experiment(s):[http://www.ebi.ac.uk/iintact/search/do/search?searchString=EBI-885898 EBI-885898]<br />
+PMID:15690043
+|
+Experiment(s):EBI-885898<br />
 |-
 |
 Protein
 |
-[[rplX:Gene_Product(s)|rplX]]<br />
+rplX<br />
 |
-|[[PMID:15690043]]<ref name=PMID:15690043/>
 |
-Experiment(s):[http://www.ebi.ac.uk/iintact/search/do/search?searchString=EBI-885898 EBI-885898]<br />
+PMID:15690043
+|
+Experiment(s):EBI-885898<br />
 |-
 |
 Protein
 |
-[[rpmB:Gene_Product(s)|rpmB]]<br />
+rpmB<br />
 |
-|[[PMID:15690043]]<ref name=PMID:15690043/>
 |
-Experiment(s):[http://www.ebi.ac.uk/iintact/search/do/search?searchString=EBI-885898 EBI-885898]<br />
+PMID:15690043
+|
+Experiment(s):EBI-885898<br />
 |-
 |
 Protein
 |
-[[rpsE:Gene_Product(s)|rpsE]]<br />
+rpsE<br />
 |
-|[[PMID:15690043]]<ref name=PMID:15690043/>
 |
-Experiment(s):[http://www.ebi.ac.uk/iintact/search/do/search?searchString=EBI-885898 EBI-885898]<br />
+PMID:15690043
+|
+Experiment(s):EBI-885898<br />
 |-
 |
 Protein
 |
-[[rpsH:Gene_Product(s)|rpsH]]<br />
+rpsH<br />
 |
-|[[PMID:15690043]]<ref name=PMID:15690043/>
 |
-Experiment(s):[http://www.ebi.ac.uk/iintact/search/do/search?searchString=EBI-885898 EBI-885898]<br />
+PMID:15690043
+|
+Experiment(s):EBI-885898<br />
 |-
 |
 Protein
 |
-[[rpsJ:Gene_Product(s)|rpsJ]]<br />
+rpsJ<br />
 |
-|[[PMID:15690043]]<ref name=PMID:15690043/>
 |
-Experiment(s):[http://www.ebi.ac.uk/iintact/search/do/search?searchString=EBI-885898 EBI-885898]<br />
+PMID:15690043
+|
+Experiment(s):EBI-885898<br />
 |-
 |
 Protein
 |
-[[rpsP:Gene_Product(s)|rpsP]]<br />
+rpsP<br />
 |
-|[[PMID:15690043]]<ref name=PMID:15690043/>
 |
-Experiment(s):[http://www.ebi.ac.uk/iintact/search/do/search?searchString=EBI-885898 EBI-885898]<br />
+PMID:15690043
+|
+Experiment(s):EBI-885898<br />
 |-
 |
 Protein
 |
-[[rpsT:Gene_Product(s)|rpsT]]<br />
+rpsT<br />
 |
-|[[PMID:15690043]]<ref name=PMID:15690043/>
 |
-Experiment(s):[http://www.ebi.ac.uk/iintact/search/do/search?searchString=EBI-885898 EBI-885898]<br />
+PMID:15690043
+|
+Experiment(s):EBI-885898<br />
 |-
 |
 Protein
 |
-[[yfiF:Gene_Product(s)|yfiF]]<br />
+yfiF<br />
 |
-|[[PMID:15690043]]<ref name=PMID:15690043/>
 |
-Experiment(s):[http://www.ebi.ac.uk/iintact/search/do/search?searchString=EBI-885898 EBI-885898]<br />
+PMID:15690043
+|
+Experiment(s):EBI-885898<br />
 |-
 |
 Protein
 |
-[[yrfD:Gene_Product(s)|yrfD]]<br />
+yrfD<br />
 |
-|[[PMID:15690043]]<ref name=PMID:15690043/>
 |
-Experiment(s):[http://www.ebi.ac.uk/iintact/search/do/search?searchString=EBI-885898 EBI-885898]<br />
+PMID:15690043
+|
+Experiment(s):EBI-885898<br />
 |-
 |
 Protein
 |
-[[groL:Gene_Product(s)|groL]]<br />
+groL<br />
 |
-|[[PMID:16606699]]<ref name=PMID:16606699/>
 |
-Experiment(s):[http://www.ebi.ac.uk/iintact/search/do/search?searchString=EBI-1139177 EBI-1139177]<br />
+PMID:16606699
+|
+Experiment(s):EBI-1139177<br />
 |-class='sortbottom'
@@ Line 905: / Line 957: @@
 |}
 <!--box uid=421aa90e079fa326b6494f812ad13e79.22344.P46aa5c563787c-->
-{{Product_interactions_help}}
 <!--Function_notes--></protect>
 ===Notes===
@@ Line 926: / Line 978: @@
 |}
 <!--box uid=421aa90e079fa326b6494f812ad13e79.22344.D46a7ef3426ef9-->
-{{Product_localization_help}}
 <protect><!--Localization_notes--></protect>
@@ Line 972: / Line 1,024: @@
 |}
 <!--box uid=421aa90e079fa326b6494f812ad13e79.22344.R46aa5c57efc91-->
-{{Product_physical_properties_help}}
 <span id="Domains/Motifs/Modification Sites"><big>'''Domains/Motifs/Modification Sites'''</big></span>
@@ Line 990: / Line 1,042: @@
 |}
 <!--box uid=421aa90e079fa326b6494f812ad13e79.22344.D46aa5c58589c4-->
-{{Product_domains_motifs_help}}
 <span id="Structure"></span><big>'''Structure'''</big>
@@ Line 1,023: / Line 1,075: @@
 |}
 <!--box uid=421aa90e079fa326b6494f812ad13e79.22344.T46a7ef35b8bd3-->
-{{Product_structure_help}}
 <!--Structure_notes--></protect>
 ===Notes===
@@ Line 1,045: / Line 1,097: @@
 |}
 <!--box uid=421aa90e079fa326b6494f812ad13e79.22344.J46aa5c58f41f9-->
-{{Product_resources_help}}
 <protect><!--Resources_notes--></protect>
 ===Notes===
@@ Line 1,102: / Line 1,154: @@
 |}
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prs:Gene Product(s): Difference between revisions

Revision as of 20:55, 16 February 2009

Nomenclature

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Function

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Localization

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Structure and Physical Properties

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Gene Product Resources

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Accessions in Other Databases

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