xerD:Quickview: Difference between revisions

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*  ** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. **  
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!align=left {{table_heading_style}} |Gene Synonym(s)
!align=left {{table_heading_style}} |Gene Synonym(s)
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''ECK2889, b2894, JW2862, xprB''<ref name='LIB:Riley_2006'/><ref name='PMID:1987126 '/>
''ECK2889, b2894, JW2862, xprB''<ref name='LIB:Riley_2006'/><ref name='PMID:1987126 '/>, xprB''
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!align=left {{table_heading_style}} |Product Desc.
!align=left {{table_heading_style}} |Product Desc.
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!align=left {{table_heading_style}} |Product Synonyms(s)
!align=left {{table_heading_style}} |Product Synonyms(s)
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site-specific tyrosine recombinase<ref name='LIB:Riley_2006'/>, B2894<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, XprB<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, XerD<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
''site-specific tyrosine recombinase<ref name='LIB:Riley_2006'/>, B2894<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, XprB<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, XerD<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , ECK2889, JW2862, xprB, b2894''
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!align=left {{table_heading_style}} |Function from GO
!align=left {{table_heading_style}} |Function from GO
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!align=left {{table_heading_style}} |Quick Links
!align=left {{table_heading_style}} |Quick Links
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[http://porteco.org/AjaxSearch.jsp?searchString=xerD&s=search PortEco search(xerD)]&nbsp;&nbsp;&nbsp; [http://ecoliwiki.net/tools/display_dna.php?gene=xerD&loc=MG1655:3037765..3036869,W3110:3038399..3037503,REL606:2925496..2924600,DH10B:3131635..3130739,BW2952:2924017..2924913 DNA display]&nbsp;&nbsp;&nbsp; [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=2924017&end=2924913&gene=xerD&aa= Protein display]&nbsp;&nbsp;&nbsp; [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=xerD+AND+escherichia+coli Pubmed(xerD)]&nbsp;&nbsp;&nbsp; [http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=xerD Textpresso(xerD)]
[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=xerD&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=EG11071]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120001060&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=xerD&loc=MG1655%3A3037765..3036869,W3110%3A3038399..3037503,REL606%3A2925496..2924600,DH10B%3A3131635..3130739,BW2952%3A2924017..2924913]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=2924017&end=2924913&gene=xerD&aa=mkqdlarieqfldalwleknlaentlnayrrdlsmmvewlhhrgltlataqsddlqallaerleggykatssarllsavrrlfqylyrekfreddpsahlaspklpqrlpkdlseaqverllqaplidqplelrdkamlevlyatglrvselvgltmsdislrqgvvrvigkgnkerlvplgeeavywletylehgrpwllngvsidvlfpsqraqqmtrqtfwhrikhyavlagidseklsphvlrhafathllnhgadlrvvqmllghsdlsttqiythvaterlrqlhqqhhpra]]&nbsp;&nbsp; [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=xerD+AND+escherichia+coli]]&nbsp;&nbsp; [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=xerD]]&nbsp;&nbsp;


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Latest revision as of 21:45, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Standard Name

xerD

Gene Synonym(s)

ECK2889, b2894, JW2862, xprB[1][2], xprB

Product Desc.

site-specific recombinase[3][4];

Component of Xer site-specific recombination system[4]

Tyrosine recombinase XerCD resolves chromosome dimers; site-specific[5]

Product Synonyms(s)

site-specific tyrosine recombinase[1], B2894[3][1], XprB[3][1], XerD[3][1] , ECK2889, JW2862, xprB, b2894

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): xerD[3]

Regulation/Activity
Quick Links



        

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See Help:Quickview for help with entering information in the Quickview table.

Notes

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XerCD acts at the Dif site.[5]



References

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  1. ↑ 1.0 1.1 1.2 1.3 1.4 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ Lovett, ST & Kolodner, RD (1991) Nucleotide sequence of the Escherichia coli recJ chromosomal region and construction of recJ-overexpression plasmids. J. Bacteriol. 173 353-64 PubMed
  3. ↑ 3.0 3.1 3.2 3.3 3.4 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  5. ↑ 5.0 5.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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