xerD:Evolution

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Homologs Families Links References Suggestions

Homologs in Other Organisms

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See Help:Evolution_homologs for help entering or editing information in this section of EcoliWiki.

Organism Homologs (Statistics) Comments

Anopheles gambiae

  • ENSANGP00000026953 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Apis mellifera

  • ENSAPMP00000025093 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Shigella flexneri

XERD

From SHIGELLACYC

E. coli O157

XERD

From ECOO157CYC


Do-It-Yourself Web Tools

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Notes

XerD shares 37% identity with XerC[1].

Families

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

Pfam (EcoliWiki Page)

PF02899 Phage integrase, N-terminal SAM-like domain

Superfamily (EcoliWiki Page)

SUPERFAMILY:47823

Superfamily (EcoliWiki Page)

SUPERFAMILY:56349

Pfam (EcoliWiki Page)

PF00589 Phage integrase family

EcoCyc

EcoCyc:EG11071

Escherichia coli str. K-12 substr. MG1655

EcoGene

EcoGene:EG11071

Escherichia coli str. K-12 substr. MG1655

RegulonDB

RegulonDB:ECK120001060

Escherichia coli str. K-12 substr. MG1655

EchoBASE

EchoBASE:EB1064

Escherichia coli str. K-12 substr. MG1655

ASAP

ASAP:ABE-0009500

Escherichia coli str. K-12 substr. MG1655

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Notes

Member of the lambda integrase family of recombinases.

Links

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References

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See Help:References for how to manage references in EcoliWiki.

  1. Blakely, G et al. (1993) Two related recombinases are required for site-specific recombination at dif and cer in E. coli K12. Cell 75 351-61 PubMed

Categories

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