xerD:Quickview: Difference between revisions
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!align=left | !align=left {{table_heading_style}} |Standard Name | ||
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''xerD'' | ''xerD'' | ||
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!align=left | !align=left {{table_heading_style}} |Gene Synonym(s) | ||
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''ECK2889, b2894, JW2862, xprB''<ref name='LIB:Riley_2006'/> | ''ECK2889, b2894, JW2862, xprB''<ref name='LIB:Riley_2006'/> | ||
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!align=left | !align=left {{table_heading_style}} |Product Desc. | ||
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site-specific recombinase<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>; | site-specific recombinase<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>; | ||
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Tyrosine recombinase XerCD resolves chromosome dimers; site-specific<ref name='LIB:EcoGene'/> | Tyrosine recombinase XerCD resolves chromosome dimers; site-specific<ref name='LIB:EcoGene'/> | ||
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!align=left | !align=left {{table_heading_style}} |Product Synonyms(s) | ||
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site-specific tyrosine recombinase<ref name='LIB:Riley_2006'/>, B2894<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, XprB<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, XerD<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | site-specific tyrosine recombinase<ref name='LIB:Riley_2006'/>, B2894<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, XprB<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, XerD<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | ||
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!align=left | !align=left {{table_heading_style}} |Function from GO | ||
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'''Biological Process''' | |||
* GO:0006310 DNA recombination ([http://www.geneontology.org/GO.evidence.shtml IMP]) | |||
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!align=left | !align=left {{table_heading_style}} |Knock-Out Phenotype | ||
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!align=left {{table_heading_style}} |Regulation/Expression | |||
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transcription unit(s): [[:Category:Txn_unit:xerD|xerD]]<ref name='LIB:EcoCyc10.6'/> | transcription unit(s): [[:Category:Txn_unit:xerD|xerD]]<ref name='LIB:EcoCyc10.6'/> | ||
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!align=left | !align=left {{table_heading_style}} |Regulation/Activity | ||
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!align=left {{table_heading_style}} |Quick Links | |||
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[http://ecoliwiki.net/tools/display_dna.php?gene=xerD&loc=MG1655:3037765..3036869,W3110:3038399..3037503,REL606:2925496..2924600,DH10B:3131635..3130739 DNA display] [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=3131635&end=3130739&gene=xerD&aa=mkqdlarieqfldalwleknlaentlnayrrdlsmmvewlhhrgltlataqsddlqallaerleggykatssarllsavrrlfqylyrekfreddpsahlaspklpqrlpkdlseaqverllqaplidqplelrdkamlevlyatglrvselvgltmsdislrqgvvrvigkgnkerlvplgeeavywletylehgrpwllngvsidvlfpsqraqqmtrqtfwhrikhyavlagidseklsphvlrhafathllnhgadlrvvqmllghsdlsttqiythvaterlrqlhqqhhpra Protein display] [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=xerD+AND+escherichia+coli Pubmed(xerD)] [http://trimer.tamu.edu/cgi-bin/textpresso/2.1/ecoli/search?searchstring=xerD Textpresso(xerD)] | |||
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Revision as of 23:24, 21 January 2010
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| Quickview | Gene | Gene Product(s) | Expression | Evolution | On One Page |
| References | Suggestions |
See Help:Quickview for help with entering information in the Quickview table.
| Standard Name |
xerD |
|---|---|
| Gene Synonym(s) |
ECK2889, b2894, JW2862, xprB[1] |
| Product Desc. |
site-specific recombinase[2][3]; Component of Xer site-specific recombination system[3] Tyrosine recombinase XerCD resolves chromosome dimers; site-specific[4] |
| Product Synonyms(s) |
site-specific tyrosine recombinase[1], B2894[2][1], XprB[2][1], XerD[2][1] |
| Function from GO |
Biological Process
|
| Knock-Out Phenotype | |
| Regulation/Expression | |
| Regulation/Activity | |
| Quick Links | |
| edit table |
See Help:Quickview for help with entering information in the Quickview table.
Notes
XerCD acts at the Dif site.[4]
References
- ↑ 1.0 1.1 1.2 1.3 1.4 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
- ↑ 2.0 2.1 2.2 2.3 2.4 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ 3.0 3.1 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.