xerD:Quickview: Difference between revisions

From EcoliWiki
Jump to navigation Jump to search
← Older edit
imported>WikiEntryBot
Automated import of articles
touch
 
(18 intermediate revisions by 4 users not shown)
Line 1: Line 1:
<!--PLEASE EDIT FROM THE SECTION OR TABLE EDIT LINKS...IF YOU SEE THIS MESSAGE, YOU'RE PROBABLY IN THE WRONG PLACE-->
<!--
***************************************************************************************************************************************************
*
*
*              PLEASE EDIT FROM THE SECTION OR TABLE EDIT LINKS...IF YOU SEE THIS MESSAGE,
*                            YOU'RE PROBABLY IN THE WRONG PLACE
*
*
***************************************************************************************************************************************************
-->{{#css:Suppresslinks.css}}<css>{{:Suppresslinks.css}}</css>
<noinclude>{{TabsTop}}   
<noinclude>{{TabsTop}}   
{{Tab On|Quickview|xerD}}{{Tab|Gene|xerD}}{{Tab|Gene Product(s)|xerD}}{{Tab|Expression|xerD}}{{Tab|Evolution|xerD}}{{Tab|On One Page|xerD}}{{TabsBottom}}
{{Tab On|Quickview|xerD}}{{Tab|Gene|xerD}}{{Tab|Gene Product(s)|xerD}}{{Tab|Expression|xerD}}{{Tab|Evolution|xerD}}{{Tab|On One Page|xerD}}{{TabsBottom}}
Line 8: Line 17:
|}
|}
</noinclude>
</noinclude>
<!--box uid=421aa90e079fa326b6494f812ad13e79..X469f90d73d758-->
<protect><!--box uid=bc145ea147f7e36caf09c1bfeed4ee9d.7540.J49b028a1090b0-->
<!--*** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. *** -->
<!--
{|{{Prettytable}}
******************************************************************************************
*
*  ** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. **
*
****************************************************************************************** -->
{|   id="J49b028a1090b0"  class=" tableEdit New_Quickview_Table" 
 
|-
|-
!{{table_heading_style}} |Gene Name
!align=left {{table_heading_style}} |Standard Name
|
||
[[xerD:Gene|''xerD]]'' (synonyms: ''ECK2889, b2894, JW2862, xprB'')<ref name='LIB:Riley_2006'/>
''xerD''
|-
|-
!{{table_heading_style}} |Product(s)  
!align=left {{table_heading_style}} |Gene Synonym(s)
|
||
[[xerD:Gene_Product(s)|XerD product]]<ref name='LIB:Riley_2006'/>: site-specific tyrosine recombinase product, B2894 product, XprB product
''ECK2889, b2894, JW2862, xprB''<ref name='LIB:Riley_2006'/><ref name='PMID:1987126 '/>, xprB''
|-
|-
!{{table_heading_style}} |Description
!align=left {{table_heading_style}} |Product Desc.
|
||
site-specific recombinase<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>  
site-specific recombinase<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>;


Component of [[:Category:Complex:Xer site-specific recombination system|Xer site-specific recombination system]]<ref name='LIB:EcoCyc11.1'/>
Component of [[:Category:Complex:Xer site-specific recombination system|Xer site-specific recombination system]]<ref name='LIB:EcoCyc11.1'/>


Tyrosine recombinase XerCD resolves chromosome dimers; site-specific<ref name='LIB:EcoGene'/>
|-
!align=left {{table_heading_style}} |Product Synonyms(s)
||
''site-specific tyrosine recombinase<ref name='LIB:Riley_2006'/>, B2894<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, XprB<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, XerD<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , ECK2889, JW2862, xprB, b2894''
|-
!align=left {{table_heading_style}} |Function from GO
||
<GO_nr />
|-
|-
!{{table_heading_style}} |Knock-Out Phenotype
!align=left {{table_heading_style}} |Knock-Out Phenotype
|
||


|-
|-
!{{table_heading_style}} |Regulation/Expression
!align=left {{table_heading_style}} |Regulation/Expression
|
||
transcription unit(s): [[:Category:Txn_unit:xerD|xerD]]<ref name='LIB:EcoCyc10.6'/>  
transcription unit(s): [[:Category:Txn_unit:xerD|xerD]]<ref name='LIB:EcoCyc10.6'/>  
|-
|-
!{{table_heading_style}} |Regulation/Activity
!align=left {{table_heading_style}} |Regulation/Activity
|
||


|-
|-
|colspan='2'|[{{SERVER}}/colipedia/index.php/Special:TableEdit?id=421aa90e079fa326b6494f812ad13e79..X469f90d73d758&page=&pagename={{FULLPAGENAMEE}} edit table]
!align=left {{table_heading_style}} |Quick Links
||
[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=xerD&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=EG11071]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120001060&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=xerD&loc=MG1655%3A3037765..3036869,W3110%3A3038399..3037503,REL606%3A2925496..2924600,DH10B%3A3131635..3130739,BW2952%3A2924017..2924913]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=2924017&end=2924913&gene=xerD&aa=mkqdlarieqfldalwleknlaentlnayrrdlsmmvewlhhrgltlataqsddlqallaerleggykatssarllsavrrlfqylyrekfreddpsahlaspklpqrlpkdlseaqverllqaplidqplelrdkamlevlyatglrvselvgltmsdislrqgvvrvigkgnkerlvplgeeavywletylehgrpwllngvsidvlfpsqraqqmtrqtfwhrikhyavlagidseklsphvlrhafathllnhgadlrvvqmllghsdlsttqiythvaterlrqlhqqhhpra]]&nbsp;&nbsp;  [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=xerD+AND+escherichia+coli]]&nbsp;&nbsp;  [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=xerD]]&nbsp;&nbsp;
 
|- class="tableEdit_footer"
|<span class="tableEdit_editLink plainlinks">[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=bc145ea147f7e36caf09c1bfeed4ee9d.7540.J49b028a1090b0&page=7540&pagename={{FULLPAGENAMEE}}&type=1&template=New_Quickview_Table edit table]</span> ||
|}
|}
<!--box uid=421aa90e079fa326b6494f812ad13e79..X469f90d73d758-->
<!--box uid=bc145ea147f7e36caf09c1bfeed4ee9d.7540.J49b028a1090b0--></protect>
{{Quickview_table_help}}
<protect><!--Quickview_notes--></protect>
<protect><!--Quickview_notes--></protect>
==Notes==
===Notes===
{{BacktoTop}}
 
XerCD acts at the Dif site.<ref name='LIB:EcoGene'/>
 




<noinclude>
<noinclude>
==References==
==References==
{{BacktoTop}}
<references/>
<references/>
</noinclude>
</noinclude>

Latest revision as of 21:45, 27 May 2013

{{#css:Suppresslinks.css}}<css>h1 .editsection { display:none;} h2 .editsection { display:none;}</css>

Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Standard Name

xerD

Gene Synonym(s)

ECK2889, b2894, JW2862, xprB[1][2], xprB

Product Desc.

site-specific recombinase[3][4];

Component of Xer site-specific recombination system[4]

Tyrosine recombinase XerCD resolves chromosome dimers; site-specific[5]

Product Synonyms(s)

site-specific tyrosine recombinase[1], B2894[3][1], XprB[3][1], XerD[3][1] , ECK2889, JW2862, xprB, b2894

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): xerD[3]

Regulation/Activity
Quick Links



        

edit table

See Help:Quickview for help with entering information in the Quickview table.

Notes

[back to top]


XerCD acts at the Dif site.[5]



References

[back to top]


  1. ↑ 1.0 1.1 1.2 1.3 1.4 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ Lovett, ST & Kolodner, RD (1991) Nucleotide sequence of the Escherichia coli recJ chromosomal region and construction of recJ-overexpression plasmids. J. Bacteriol. 173 353-64 PubMed
  3. ↑ 3.0 3.1 3.2 3.3 3.4 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  5. ↑ 5.0 5.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
Retrieved from "https://ecoliwiki.org/colipedia/index.php?title=xerD:Quickview&oldid=1395662"