clpX:Quickview: Difference between revisions

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!align=left {{table_heading_style}} |Gene Synonym(s)
!align=left {{table_heading_style}} |Gene Synonym(s)
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''ECK0432, b0438, JW0428, LopC''<ref name='LIB:Riley_2006'/>
''ECK0432, b0438, JW0428, LopC''<ref name='LIB:Riley_2006'/>, lopC''
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!align=left {{table_heading_style}} |Product Desc.
!align=left {{table_heading_style}} |Product Desc.
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!align=left {{table_heading_style}} |Product Synonyms(s)
!align=left {{table_heading_style}} |Product Synonyms(s)
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ATPase and specificity subunit of ClpX-ClpP ATP-dependent serine protease<ref name='LIB:Riley_2006'/>, B0438<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, LopC<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
''ATPase and specificity subunit of ClpX-ClpP ATP-dependent serine protease<ref name='LIB:Riley_2006'/>, B0438<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, LopC<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , ECK0432, JW0428, lopC, b0438''
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!align=left {{table_heading_style}} |Function from GO
!align=left {{table_heading_style}} |Function from GO
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!align=left {{table_heading_style}} |Quick Links
!align=left {{table_heading_style}} |Quick Links
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[http://porteco.org/AjaxSearch.jsp?searchString=clpX&s=search PortEco search(clpX)]&nbsp;&nbsp;&nbsp; [http://ecoliwiki.net/tools/display_dna.php?gene=clpX&loc=MG1655:456650..457924,W3110:456650..457924,DH10B:395981..397255,REL606:428131..429405,BW2952:359409..360683 DNA display]&nbsp;&nbsp;&nbsp; [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=359409&end=360683&gene=clpX&aa=mtdkrkdgsgkllycsfcgksqhevrkliagpsvyicdecvdlcndiireeikevaphrersalptpheirnhlddyvigqeqakkvlavavynhykrlrngdtsngvelgksnilligptgsgktllaetlarlldvpftmadattlteagyvgedveniiqkllqkcdydvqkaqrgivyideidkisrksdnpsitrdvsgegvqqallkliegtvaavppqggrkhpqqeflqvdtskilficggafagldkvishrvetgsgigfgatvkaksdkasegellaqvepedlikfglipefigrlpvvatlnelseealiqilkepknaltkqyqalfnlegvdlefrdealdaiakkamarktgarglrsiveaalldtmydlpsmedvekvvidesvidgqskplliygkpeaqqasge Protein display]&nbsp;&nbsp;&nbsp; [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=clpX+AND+escherichia+coli Pubmed(clpX)]&nbsp;&nbsp;&nbsp; [http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=clpX Textpresso(clpX)]
[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=clpX&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=EG10159]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120000155&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=clpX&loc=MG1655%3A456650..457924,W3110%3A456650..457924,DH10B%3A395981..397255,REL606%3A428131..429405,BW2952%3A359409..360683]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=359409&end=360683&gene=clpX&aa=mtdkrkdgsgkllycsfcgksqhevrkliagpsvyicdecvdlcndiireeikevaphrersalptpheirnhlddyvigqeqakkvlavavynhykrlrngdtsngvelgksnilligptgsgktllaetlarlldvpftmadattlteagyvgedveniiqkllqkcdydvqkaqrgivyideidkisrksdnpsitrdvsgegvqqallkliegtvaavppqggrkhpqqeflqvdtskilficggafagldkvishrvetgsgigfgatvkaksdkasegellaqvepedlikfglipefigrlpvvatlnelseealiqilkepknaltkqyqalfnlegvdlefrdealdaiakkamarktgarglrsiveaalldtmydlpsmedvekvvidesvidgqskplliygkpeaqqasge]]&nbsp;&nbsp; [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=clpX+AND+escherichia+coli]]&nbsp;&nbsp; [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=clpX]]&nbsp;&nbsp;


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Latest revision as of 21:52, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Standard Name

clpX

Gene Synonym(s)

ECK0432, b0438, JW0428, LopC[1], lopC

Product Desc.

ClpX[2][3];

Component of ClpX ATP-dependent protease specificity component and chaperone[3]; ClpAXP[3]; ClpXP[3]

ATPase subunit of ClpXP protease; ClpXP degrades ssrA-tagged proteins; molecular chaperone[4]

Product Synonyms(s)

ATPase and specificity subunit of ClpX-ClpP ATP-dependent serine protease[1], B0438[2][1], LopC[2][1] , ECK0432, JW0428, lopC, b0438

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): clpPX[2]

Regulation/Activity
Quick Links



        

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Notes

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References

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  1. ↑ 1.0 1.1 1.2 1.3 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ 3.0 3.1 3.2 3.3 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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