malE:Quickview: Difference between revisions

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!align=left {{table_heading_style}} |Standard Name
!align=left {{table_heading_style}} |Standard Name
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''malE''  
''malE''
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!align=left {{table_heading_style}} |Gene Synonym(s)
!align=left {{table_heading_style}} |Gene Synonym(s)
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''ECK4026, b4034, JW3994''<ref name='LIB:Riley_2006'/>
''ECK4026, b4034, JW3994''<ref name='LIB:Riley_2006'/>, JW3994, malJ''
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!align=left {{table_heading_style}} |Product Desc.
!align=left {{table_heading_style}} |Product Desc.
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!align=left {{table_heading_style}} |Product Synonyms(s)
!align=left {{table_heading_style}} |Product Synonyms(s)
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maltose transporter subunit<ref name='LIB:Riley_2006'/>, periplasmic-binding component of ABC superfamily<ref name='LIB:Riley_2006'/>, B4034<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, MalE<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, MBP<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
''maltose transporter subunit<ref name='LIB:Riley_2006'/>, periplasmic-binding component of ABC superfamily<ref name='LIB:Riley_2006'/>, B4034<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, MalE<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, MBP<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , ECK4026, JW3994, malJ, b4034''
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!align=left {{table_heading_style}} |Function from GO
!align=left {{table_heading_style}} |Function from GO
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'''Biological Process'''
<GO_nr />
* GO:0015768 maltose transport ([http://www.geneontology.org/GO.evidence.shtml IDA,IGI])
* GO:0042956 maltodextrin transport ([http://www.geneontology.org/GO.evidence.shtml IMP])
* GO:0006810 transport ([http://www.geneontology.org/GO.evidence.shtml IGI])
* GO:0008643 carbohydrate transport ([http://www.geneontology.org/GO.evidence.shtml IGI])
'''Cellular Component'''
* GO:0043190 ATP-binding cassette (ABC) transporter complex ([http://www.geneontology.org/GO.evidence.shtml IDA,IGI])
* GO:0042597 periplasmic space ([http://www.geneontology.org/GO.evidence.shtml IDA])
* GO:0055052 ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing ([http://www.geneontology.org/GO.evidence.shtml IGI])
'''Molecular Function'''
* GO:0048030 disaccharide binding ([http://www.geneontology.org/GO.evidence.shtml IPI])
* GO:0005215 transporter activity ([http://www.geneontology.org/GO.evidence.shtml IGI])
 
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!align=left {{table_heading_style}} |Knock-Out Phenotype
!align=left {{table_heading_style}} |Knock-Out Phenotype
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!align=left {{table_heading_style}} |Quick Links
!align=left {{table_heading_style}} |Quick Links
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[http://ecoliwiki.net/tools/display_dna.php?gene=malE&loc=MG1655:4244442..4243252,W3110:4250009..4248819,DH10B:4344138..4342948,REL606:4225351..4224161 DNA display]&nbsp;&nbsp;&nbsp; [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=4225351&end=4224161&gene=malE&aa=mkiktgarilalsalttmmfsasalakieegklviwingdkgynglaevgkkfekdtgikvtvehpdkleekfpqvaatgdgpdiifwahdrfggyaqsgllaeitpdkafqdklypftwdavryngkliaypiavealsliynkdllpnppktweeipaldkelkakgksalmfnlqepyftwpliaadggyafkyengkydikdvgvdnagakagltflvdliknkhmnadtdysiaeaafnkgetamtingpwawsnidtskvnygvtvlptfkgqpskpfvgvlsaginaaspnkelakeflenylltdegleavnkdkplgavalksyeeelakdpriaatmenaqkgeimpnipqmsafwyavrtavinaasgrqtvdealkdaqtritk Protein display]&nbsp;&nbsp;&nbsp; [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=malE+AND+escherichia+coli Pubmed(malE)]&nbsp;&nbsp;&nbsp; [http://trimer.tamu.edu/cgi-bin/textpresso/2.1/ecoli/search?searchstring=malE Textpresso(malE)]
[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=malE&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=EG10554]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120000547&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=malE&loc=MG1655%3A4244442..4243252,W3110%3A4250009..4248819,DH10B%3A4344138..4342948,REL606%3A4225351..4224161,BW2952%3A4182097..4183287]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=4182097&end=4183287&gene=malE&aa=mkiktgarilalsalttmmfsasalakieegklviwingdkgynglaevgkkfekdtgikvtvehpdkleekfpqvaatgdgpdiifwahdrfggyaqsgllaeitpdkafqdklypftwdavryngkliaypiavealsliynkdllpnppktweeipaldkelkakgksalmfnlqepyftwpliaadggyafkyengkydikdvgvdnagakagltflvdliknkhmnadtdysiaeaafnkgetamtingpwawsnidtskvnygvtvlptfkgqpskpfvgvlsaginaaspnkelakeflenylltdegleavnkdkplgavalksyeeelakdpriaatmenaqkgeimpnipqmsafwyavrtavinaasgrqtvdealkdaqtritk]]&nbsp;&nbsp; [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=malE+AND+escherichia+coli]]&nbsp;&nbsp; [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=malE]]&nbsp;&nbsp;


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Latest revision as of 21:48, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Standard Name

malE

Gene Synonym(s)

ECK4026, b4034, JW3994[1], JW3994, malJ

Product Desc.

MalE[2][3];

Component of maltose ABC transporter[2][3]; Maltose/Maltodextrin Transport System[3]

Maltose-binding protein, periplasmic; MBP; substrate recognition for active transport of and chemotaxis toward maltose and maltodextrin[4]

Product Synonyms(s)

maltose transporter subunit[1], periplasmic-binding component of ABC superfamily[1], B4034[2][1], MalE[2][1], MBP[2][1] , ECK4026, JW3994, malJ, b4034

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): malEFG[2], OP00047, malE

Regulation/Activity
Quick Links



        

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Notes

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Biofilm microarray result was validated with RT-PCR. MalE binds maltose and maltodextrin and mediates chemotaxis through the Tar chemoreceptor. MalT regulon. creBC regulon.Alkali-inducible. Upregulated in biofilms. Downregulated during cold-shock in a pnp-dependent way. Binds TrxA (Kumar, 2004).[4]



References

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See Help:References for how to manage references in EcoliWiki.

  1. ↑ 1.0 1.1 1.2 1.3 1.4 1.5 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 2.5 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ 3.0 3.1 3.2 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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