pyrH:Gene Product(s): Difference between revisions

Standard name	PyrH
Synonyms	uridylate kinase^[1], B0171^[2]^[1], Umk^[2]^[1], SmbA^[2]^[1], PyrH^[2]^[1] , ECK0170, JW0166, smbA, umk, b0171
Product description	UMPKI^[2]^[3]; Component of uridylate kinase^[2]^[3] UMP kinase; hexameric; essential gene^[4]
EC number (for enzymes)	2.7.4.-^[1]
edit table

Notes

Function

[back to top]

Gene Ontology
See Help:Gene_ontology for help entering or editing GO terms and GO annotations in EcoliWiki.

Qualifier	GO ID	GO term name	Reference	Evidence Code	with/from	Aspect	Notes	Status
	GO:0000166	nucleotide binding	GOA:spkw SP_KW:GO_REF:0000004	IEA: Inferred from Electronic Annotation	SP_KW:KW-0547	F	Seeded from EcoCyc (v14.0)	complete
	GO:0005524	ATP binding	GOA:spkw SP_KW:GO_REF:0000004	IEA: Inferred from Electronic Annotation	SP_KW:KW-0067	F	Seeded from EcoCyc (v14.0)	complete
	GO:0005737	cytoplasm	GOA:hamap GO_REF:0000020	IEA: Inferred from Electronic Annotation	HAMAP:MF_01220	C	Seeded from EcoCyc (v14.0)	complete
	GO:0005737	cytoplasm	GOA:interpro GO_REF:0000002	IEA: Inferred from Electronic Annotation	InterPro:IPR015963	C	Seeded from EcoCyc (v14.0)	complete
	GO:0005737	cytoplasm	GOA:spkw SP_KW:GO_REF:0000004	IEA: Inferred from Electronic Annotation	SP_KW:KW-0963	C	Seeded from EcoCyc (v14.0)	complete
	GO:0005737	cytoplasm	GO_REF:0000023	IEA: Inferred from Electronic Annotation	SP_SL:SL-0086	C	Seeded from EcoCyc (v14.0)	complete
	GO:0006221	pyrimidine nucleotide biosynthetic process	GOA:hamap GO_REF:0000020	IEA: Inferred from Electronic Annotation	HAMAP:MF_01220	P	Seeded from EcoCyc (v14.0)	complete
	GO:0006221	pyrimidine nucleotide biosynthetic process	GOA:interpro GO_REF:0000002	IEA: Inferred from Electronic Annotation	InterPro:IPR011817	P	Seeded from EcoCyc (v14.0)	complete
	GO:0006221	pyrimidine nucleotide biosynthetic process	GOA:interpro GO_REF:0000002	IEA: Inferred from Electronic Annotation	InterPro:IPR015963	P	Seeded from EcoCyc (v14.0)	complete
	GO:0006221	pyrimidine nucleotide biosynthetic process	GOA:spkw SP_KW:GO_REF:0000004	IEA: Inferred from Electronic Annotation	SP_KW:KW-0665	P	Seeded from EcoCyc (v14.0)	complete
	GO:0008652	cellular amino acid biosynthetic process	GOA:interpro GO_REF:0000002	IEA: Inferred from Electronic Annotation	InterPro:IPR001048	P	Seeded from EcoCyc (v14.0)	complete
	GO:0009041	uridylate kinase activity	GOA:hamap GO_REF:0000020	IEA: Inferred from Electronic Annotation	HAMAP:MF_01220	F	Seeded from EcoCyc (v14.0)	complete
	GO:0009041	uridylate kinase activity	GOA:interpro GO_REF:0000002	IEA: Inferred from Electronic Annotation	InterPro:IPR011817	F	Seeded from EcoCyc (v14.0)	complete
	GO:0016301	kinase activity	GOA:spkw SP_KW:GO_REF:0000004	IEA: Inferred from Electronic Annotation	SP_KW:KW-0418	F	Seeded from EcoCyc (v14.0)	complete
	GO:0016740	transferase activity	GOA:spkw SP_KW:GO_REF:0000004	IEA: Inferred from Electronic Annotation	SP_KW:KW-0808	F	Seeded from EcoCyc (v14.0)	complete
	GO:0033862	UMP kinase activity	GOA:interpro GO_REF:0000002	IEA: Inferred from Electronic Annotation	InterPro:IPR015963	F	Seeded from EcoCyc (v14.0)	complete
	GO:0033862	UMP kinase activity	GOA:spec GO_REF:0000003	IEA: Inferred from Electronic Annotation	EC:2.7.4.22	F	Seeded from EcoCyc (v14.0)	complete
edit table

Interactions See Help:Product_interactions for help entering or editing information about gene product interactions in this section of EcoliWiki.

Partner Type	Partner	Notes	References	Evidence
Protein	Subunits of uridylate kinase	could be indirect
Protein	gatZ		PMID:15690043^[5]	Experiment(s):EBI-890235
Protein	recA		PMID:15690043^[5]	Experiment(s):EBI-890235
Protein	rho		PMID:15690043^[5]	Experiment(s):EBI-890235
Protein	tsf		PMID:16606699^[6]	Experiment(s):EBI-1135778
Protein	iaaA		PMID:16606699^[6]	Experiment(s):EBI-1135778
Protein	fusA		PMID:15690043^[5]	Experiment(s):EBI-895127
Protein	gatA		PMID:15690043^[5]	Experiment(s):EBI-895127
Protein	gatB		PMID:15690043^[5]	Experiment(s):EBI-895127
Protein	hns		PMID:15690043^[5]	Experiment(s):EBI-895127
Protein	degP		PMID:15690043^[5]	Experiment(s):EBI-895127
Protein	hupA		PMID:15690043^[5]	Experiment(s):EBI-895127
Protein	hupB		PMID:15690043^[5]	Experiment(s):EBI-895127
Protein	lpxC		PMID:15690043^[5]	Experiment(s):EBI-895127
Protein	groL		PMID:15690043^[5]	Experiment(s):EBI-895127
Protein	rplA		PMID:15690043^[5]	Experiment(s):EBI-895127
Protein	rplB		PMID:15690043^[5]	Experiment(s):EBI-895127
Protein	rplC		PMID:15690043^[5]	Experiment(s):EBI-895127
Protein	rplD		PMID:15690043^[5]	Experiment(s):EBI-895127
Protein	rplE		PMID:15690043^[5]	Experiment(s):EBI-895127
Protein	rplI		PMID:15690043^[5]	Experiment(s):EBI-895127
Protein	rplK		PMID:15690043^[5]	Experiment(s):EBI-895127
Protein	rplL		PMID:15690043^[5]	Experiment(s):EBI-895127
Protein	rplM		PMID:15690043^[5]	Experiment(s):EBI-895127
Protein	rplR		PMID:15690043^[5]	Experiment(s):EBI-895127
Protein	rplS		PMID:15690043^[5]	Experiment(s):EBI-895127
Protein	rplU		PMID:15690043^[5]	Experiment(s):EBI-895127
Protein	rplV		PMID:15690043^[5]	Experiment(s):EBI-895127
Protein	rplW		PMID:15690043^[5]	Experiment(s):EBI-895127
Protein	rpmA		PMID:15690043^[5]	Experiment(s):EBI-895127
Protein	rpmG		PMID:15690043^[5]	Experiment(s):EBI-895127
Protein	rpsA		PMID:15690043^[5]	Experiment(s):EBI-895127
Protein	rpsB		PMID:15690043^[5]	Experiment(s):EBI-895127
Protein	rpsC		PMID:15690043^[5]	Experiment(s):EBI-895127
Protein	rpsE		PMID:15690043^[5]	Experiment(s):EBI-895127
Protein	rpsG		PMID:15690043^[5]	Experiment(s):EBI-895127
Protein	rpsJ		PMID:15690043^[5]	Experiment(s):EBI-895127
Protein	rpsP		PMID:15690043^[5]	Experiment(s):EBI-895127
Protein	secA		PMID:15690043^[5]	Experiment(s):EBI-895127
Protein	slyD		PMID:15690043^[5]	Experiment(s):EBI-895127
Protein	thiE		PMID:15690043^[5]	Experiment(s):EBI-895127
Protein	tufA		PMID:15690043^[5]	Experiment(s):EBI-895127
Protein	uspA		PMID:15690043^[5]	Experiment(s):EBI-895127
Protein	uspG		PMID:15690043^[5]	Experiment(s):EBI-895127
Protein	yfiF		PMID:15690043^[5]	Experiment(s):EBI-895127
Protein	yhbY		PMID:15690043^[5]	Experiment(s):EBI-895127
Protein	yebT		PMID:15690043^[5]	Experiment(s):EBI-895127
Protein	cadB		PMID:15690043^[5]	Experiment(s):EBI-895127
Protein	clpA		PMID:15690043^[5]	Experiment(s):EBI-895127
Protein	dnaJ		PMID:15690043^[5]	Experiment(s):EBI-895127
Protein	dnaK		PMID:15690043^[5]	Experiment(s):EBI-895127
Protein	rplO		PMID:19402753^[7]	LCMS(ID Probability):99.6
Protein	groL		PMID:19402753^[7]	LCMS(ID Probability):99.6
Protein	rpsA		PMID:19402753^[7]	LCMS(ID Probability):99.6
Protein	rplA		PMID:19402753^[7]	LCMS(ID Probability):99.0 MALDI(Z-score):14.894884
Protein	rpsP		PMID:19402753^[7]	LCMS(ID Probability):99.6
Protein	rpsN		PMID:19402753^[7]	LCMS(ID Probability):99.6
Protein	rplU		PMID:19402753^[7]	LCMS(ID Probability):99.6
Protein	rpsC		PMID:19402753^[7]	LCMS(ID Probability):99.0 MALDI(Z-score):13.593031
Protein	rpsF		PMID:19402753^[7]	LCMS(ID Probability):99.6
Protein	gatA		PMID:19402753^[7]	LCMS(ID Probability):99.0
Protein	rplB		PMID:19402753^[7]	LCMS(ID Probability):99.4 MALDI(Z-score):23.928856
Protein	rpsJ		PMID:19402753^[7]	LCMS(ID Probability):99.6
Protein	fusA		PMID:19402753^[7]	LCMS(ID Probability):99.0
Protein	recA		PMID:19402753^[7]	MALDI(Z-score):32.115364
Protein	uspA		PMID:19402753^[7]	LCMS(ID Probability):99.0
Protein	gatB		PMID:19402753^[7]	LCMS(ID Probability):99.0
Protein	clpA		PMID:19402753^[7]	LCMS(ID Probability):99.0
Protein	rplW		PMID:19402753^[7]	LCMS(ID Probability):99.6
Protein	yhbY		PMID:19402753^[7]	LCMS(ID Probability):99.6
Protein	yebT		PMID:19402753^[7]	LCMS(ID Probability):99.0
Protein	degP		PMID:19402753^[7]	LCMS(ID Probability):99.0
Protein	cadB		PMID:19402753^[7]	LCMS(ID Probability):99.0
Protein	lpxC		PMID:19402753^[7]	LCMS(ID Probability):99.0
Protein	thiE		PMID:19402753^[7]	LCMS(ID Probability):99.0
edit table

Notes

Localization

See Help:Product_localization for how to add or edit information in this section of EcoliWiki.

Compartment	Description	Evidence	Reference/Source	Notes
edit table

Notes

Structure and Physical Properties

[back to top]

Physical Properties See Help:Product_physical_properties for help entering or editing information about the physical properties of this gene product.

Name
Sequence	at EcoCyc MATNAKPVYK RILLKLSGEA LQGTEGFGID ASILDRMAQE IKELVELGIQ VGVVIGGGNL FRGAGLAKAG MNRVVGDHMG MLATVMNGLA MRDALHRAYV NARLMSAIPL NGVCDSYSWA EAISLLRNNR VVILSAGTGN PFFTTDSAAC LRGIEIEADV VLKATKVDGV FTADPAKDPT ATMYEQLTYS EVLEKELKVM DLAAFTLARD HKLPIRVFNM NKPGALRRVV MGEKEGTLIT E
Length	241
Mol. Wt	25.97 kDa
pI	7.2 (calculated)
Extinction coefficient	12,950 - 13,200 (calc based on 5 Y, 1 W, and 2 C residues)
edit table

Domains/Motifs/Modification Sites

See Help:Product_domains_motifs for help entering or editing information in this section of EcoliWiki.

Type	Residues	Description	Notes	References
Initiator Methionine	1	Removed	UniProt:P0A7E9
Domain	10..219	PF00696 Amino acid kinase family		PMID:19920124^[8]
edit table

<motif_map/>

Structure
See Help:Product_structure for help entering or editing information in this section of EcoliWiki.

Structures

<beststructure> gene=pyrH taxon=562,83333 </beststructure>

Models

View models at:

edit table

Structure figures

Notes

Gene Product Resources

[back to top]

See Help:Product_resources for help with entering or editing information in this section of EcoliWiki.

Resource type	Source	Notes/Reference
edit table

Notes

Accessions in Other Databases

[back to top]

See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database	Accession	Notes
NCBI (Protein) (EcoliWiki Page)	GI:16128164	Escherichia coli str. K-12 substr. MG1655
NCBI (Protein) (EcoliWiki Page)	GeneID:944989	Escherichia coli str. K-12 substr. MG1655
ASAP	ASAP:ABE-0000582	Escherichia coli str. K-12 substr. MG1655
UniProt (EcoliWiki Page)	UniProtKB/Swiss-Prot:P0A7E9	Escherichia coli str. K-12 substr. MG1655
EcoCyc	EcoCyc:EG11539	Escherichia coli str. K-12 substr. MG1655
EcoGene	EcoGene:EG11539	Escherichia coli str. K-12 substr. MG1655
NCBI (Gene) (EcoliWiki Page)	GeneID:944989	Escherichia coli str. K-12 substr. MG1655
RegulonDB	RegulonDB:ECK120001493	Escherichia coli str. K-12 substr. MG1655
EchoBASE	EchoBASE:EB1501	Escherichia coli str. K-12 substr. MG1655
edit table

Notes

Links

[back to top]

Name	URL	Comments
edit table

References

[back to top]

See Help:References for how to manage references in EcoliWiki.

↑ ^1.0 ^1.1 ^1.2 ^1.3 ^1.4 ^1.5 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
↑ ^2.0 ^2.1 ^2.2 ^2.3 ^2.4 ^2.5 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
↑ ^3.0 ^3.1 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
↑ EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
↑ ^5.00 ^5.01 ^5.02 ^5.03 ^5.04 ^5.05 ^5.06 ^5.07 ^5.08 ^5.09 ^5.10 ^5.11 ^5.12 ^5.13 ^5.14 ^5.15 ^5.16 ^5.17 ^5.18 ^5.19 ^5.20 ^5.21 ^5.22 ^5.23 ^5.24 ^5.25 ^5.26 ^5.27 ^5.28 ^5.29 ^5.30 ^5.31 ^5.32 ^5.33 ^5.34 ^5.35 ^5.36 ^5.37 ^5.38 ^5.39 ^5.40 ^5.41 ^5.42 ^5.43 ^5.44 ^5.45 ^5.46 ^5.47 Butland, G et al. (2005) Interaction network containing conserved and essential protein complexes in Escherichia coli. Nature 433 531-7 PubMed
↑ ^6.0 ^6.1 Arifuzzaman, M et al. (2006) Large-scale identification of protein-protein interaction of Escherichia coli K-12. Genome Res. 16 686-91 PubMed
↑ ^7.00 ^7.01 ^7.02 ^7.03 ^7.04 ^7.05 ^7.06 ^7.07 ^7.08 ^7.09 ^7.10 ^7.11 ^7.12 ^7.13 ^7.14 ^7.15 ^7.16 ^7.17 ^7.18 ^7.19 ^7.20 ^7.21 ^7.22 ^7.23 Hu, P et al. (2009) Global functional atlas of Escherichia coli encompassing previously uncharacterized proteins. PLoS Biol. 7 e96 PubMed
↑ Finn, RD et al. (2010) The Pfam protein families database. Nucleic Acids Res. 38 D211-22 PubMed

pyrH:Gene Product(s): Difference between revisions

Latest revision as of 20:22, 17 February 2015

Nomenclature

Notes

Function

Notes

Localization

Notes

Structure and Physical Properties

Structure figures

Notes

Gene Product Resources

Notes

Accessions in Other Databases

Notes

Links

References

Categories

Navigation menu

@@ Line 44: / Line 44: @@
 !align=left {{table heading style}} |Synonyms
 ||
-uridylate kinase<ref name='LIB:Riley_2006'/>, B0171<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, Umk<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, SmbA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, PyrH<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>
+''uridylate kinase<ref name='LIB:Riley_2006'/>, B0171<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, Umk<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, SmbA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, PyrH<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , ECK0170, JW0166, smbA, umk, b0171''
 |-
 !align=left {{table heading style}} |Product description
@@ Line 77: / Line 77: @@
 *
 ****************************************************************************************** -->{{Product_GO_help}}
-{|   id="Q46aa20c1a4137"  class=" tableEdit GO_table_product dataTable"
+{| border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;"  id="Q46aa20c1a4137"  class=" tableEdit GO_table_product dataTable"
 |- {{table_heading_style}}
-!|Qualifier!!GO ID!!GO term name!!Reference(s)!!Evidence Code!!with/from!!Aspect!!Notes!!Status
+!|Qualifier!!GO ID!!GO term name!!Reference!!Evidence Code!!with/from!!Aspect!!Notes!!Status
 |-
 |
@@ Line 417: / Line 417: @@
 *
 ****************************************************************************************** -->{{Product_interactions_help}}
-{|   id="O46aa20cc5d6ca"  class=" tableEdit Product_interactions_table dataTable"
+{| border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;"  id="O46aa20cc5d6ca"  class=" tableEdit Product_interactions_table dataTable"
 |- {{table heading style}}
 !|Partner Type!!Partner!!Notes!!References!!Evidence
@@ Line 985: / Line 985: @@
 Protein
 |
-[[rplO:Gene_Product(s)|rplO]]
+rplO
 |
@@ Line 996: / Line 996: @@
 Protein
 |
-[[groL:Gene_Product(s)|groL]]
+groL
 |
@@ Line 1,007: / Line 1,007: @@
 Protein
 |
-[[rpsA:Gene_Product(s)|rpsA]]
+rpsA
 |
@@ Line 1,018: / Line 1,018: @@
 Protein
 |
-[[rplA:Gene_Product(s)|rplA]]
+rplA
 |
@@ Line 1,029: / Line 1,029: @@
 Protein
 |
-[[rpsP:Gene_Product(s)|rpsP]]
+rpsP
 |
@@ Line 1,040: / Line 1,040: @@
 Protein
 |
-[[rpsN:Gene_Product(s)|rpsN]]
+rpsN
 |
@@ Line 1,051: / Line 1,051: @@
 Protein
 |
-[[rplU:Gene_Product(s)|rplU]]
+rplU
 |
@@ Line 1,062: / Line 1,062: @@
 Protein
 |
-[[rpsC:Gene_Product(s)|rpsC]]
+rpsC
 |
@@ Line 1,073: / Line 1,073: @@
 Protein
 |
-[[rpsF:Gene_Product(s)|rpsF]]
+rpsF
 |
@@ Line 1,084: / Line 1,084: @@
 Protein
 |
-[[gatA:Gene_Product(s)|gatA]]
+gatA
 |
@@ Line 1,095: / Line 1,095: @@
 Protein
 |
-[[rplB:Gene_Product(s)|rplB]]
+rplB
 |
@@ Line 1,106: / Line 1,106: @@
 Protein
 |
-[[rpsJ:Gene_Product(s)|rpsJ]]
+rpsJ
 |
@@ Line 1,117: / Line 1,117: @@
 Protein
 |
-[[fusA:Gene_Product(s)|fusA]]
+fusA
 |
@@ Line 1,128: / Line 1,128: @@
 Protein
 |
-[[recA:Gene_Product(s)|recA]]
+recA
 |
@@ Line 1,134: / Line 1,134: @@
 PMID:19402753
 |
- MALDI(Z-score):32.115364
+MALDI(Z-score):32.115364
 |-
 |
 Protein
 |
-[[uspA:Gene_Product(s)|uspA]]
+uspA
 |
@@ Line 1,150: / Line 1,150: @@
 Protein
 |
-[[gatB:Gene_Product(s)|gatB]]
+gatB
 |
@@ Line 1,161: / Line 1,161: @@
 Protein
 |
-[[clpA:Gene_Product(s)|clpA]]
+clpA
+|
+|
+PMID:19402753
+|
+LCMS(ID Probability):99.0
+|-
+|
+Protein
+|
+rplW
+|
+|
+PMID:19402753
+|
+LCMS(ID Probability):99.6
+|-
+|
+Protein
+|
+yhbY
+|
+|
+PMID:19402753
+|
+LCMS(ID Probability):99.6
+|-
+|
+Protein
+|
+yebT
+|
+|
+PMID:19402753
+|
+LCMS(ID Probability):99.0
+|-
+|
+Protein
+|
+degP
+|
+|
+PMID:19402753
+|
+LCMS(ID Probability):99.0
+|-
+|
+Protein
+|
+cadB
+|
+|
+PMID:19402753
+|
+LCMS(ID Probability):99.0
+|-
+|
+Protein
+|
+lpxC
+|
+|
+PMID:19402753
+|
+LCMS(ID Probability):99.0
+|-
+|
+Protein
+|
+thiE
 |
@@ Line 1,186: / Line 1,263: @@
 *
 ****************************************************************************************** -->{{Product_localization_help}}
-{|   id="O46a7b21e6d38f"  class=" tableEdit Product_localization_table"
+{| border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;"  id="O46a7b21e6d38f"  class=" tableEdit Product_localization_table"
 |- {{table heading style}}
-!|Compartment!!Description!!Evidence!!Source!!Notes
+!|Compartment!!Description!!Evidence!!Reference/Source!!Notes
 |- class="tableEdit_footer"
@@ Line 1,212: / Line 1,289: @@
 ****************************************************************************************** -->{{Product_physical_properties_help}}
 {|   id="N46aa20ce72147"  class=" tableEdit Product_phys_prop_table"
+|-
+!align=left {{table heading style}} |Name
+||
 |-
@@ Line 1,253: / Line 1,334: @@
 *
 ****************************************************************************************** -->{{Product_domains_motifs_help}}
-{|   id="V46aa20ceca58c"  class=" tableEdit Product_motif_table dataTable"
+{| border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;"  id="V46aa20ceca58c"  class=" tableEdit Product_motif_table dataTable"
 |- {{table heading style}}
 !|Type!!Residues!!Description!!Notes!!References
@@ Line 1,313: / Line 1,394: @@
 ||
 View models at:
-* [http://dragon.bio.purdue.edu/ecolpredict2/localsearch/cgi-bin/search3.cgi?q=recA EcoliPredict]
+* [http://www.proteinmodelportal.org/query/uniprot/P0A7E9 Protein Model Portal]
-* [http://modbase.compbio.ucsf.edu/modbase-cgi/model_search.cgi?searchmode=default&displaymode=moddetail&searchproperties=ALL&searchvalue=recA&organism=562&organismtext= ModBase]
+* [http://bioinf.cs.ucl.ac.uk/genome3d/read?uniprot_id=P0A7E9 PSI-PRED (P0A7E9)]
-* [http://bioinf.cs.ucl.ac.uk/psipred/ PSI-PRED]
+* [http://spock.genes.nig.ac.jp/~genome/cgi-bin/gkeytext.pl.cgi?A&QUERY1=P0A7E9 Genomes TO Protein (P0A7E9)] (GTOP)
-* [http://www.ebi.ac.uk/msd-srv/pqs/ Protein Quaternary Structure] (PQS)
-* [http://spock.genes.nig.ac.jp/~genome/search.html Genomes TO Protein] (GTOP)
 |- class="tableEdit_footer"
@@ Line 1,358: / Line 1,437: @@
 *
 ****************************************************************************************** -->{{Product_resources_help}}
-{|   id="H46aa20d0d0c46"  class=" tableEdit Product_resource_table"
+{| border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;"  id="H46aa20d0d0c46"  class=" tableEdit Product_resource_table"
 |- {{table_heading_style}}
 !|Resource type!!Source!!Notes/Reference
@@ Line 1,380: / Line 1,459: @@
 *
 ****************************************************************************************** -->{{Gene_accessions_help}}
-{|   id="P46aa20d125ff8"  class=" tableEdit Gene_accessions_table"
+{| border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;"  id="P46aa20d125ff8"  class=" tableEdit Gene_accessions_table"
 |- {{table_heading_style}}
 !|Database!!Accession!!Notes
 |-
 |
-[http://ecocyc.org EcoCyc] ([[EcoCyc|EcoliWiki Page]])
+[http://www.ncbi.nlm.nih.gov/protein NCBI (Protein)] ([[NCBI (Protein)|EcoliWiki Page]])
+|
+[http://www.ncbi.nlm.nih.gov/protein/16128164 GI:16128164]
+|
+Escherichia coli str. K-12 substr. MG1655
+|-
+|
+[http://www.ncbi.nlm.nih.gov/protein NCBI (Protein)] ([[NCBI (Protein)|EcoliWiki Page]])
+|
+[http://www.ncbi.nlm.nih.gov/protein/NP_414713.1 GeneID:944989]
+|
+Escherichia coli str. K-12 substr. MG1655
+|-
+|
+[[ASAP]]
+|
+ASAP:ABE-0000582
+|
+''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
+|-
+|
+[http://www.pir.uniprot.org/ UniProt] ([[UniProt|EcoliWiki Page]])
+|
+[http://www.uniprot.org/uniprot/P0A7E9 UniProtKB/Swiss-Prot:P0A7E9]
+|
+Escherichia coli str. K-12 substr. MG1655
+|-
+|
+[[EcoCyc]]
+|
+EcoCyc:EG11539
+|
+''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
+|-
+|
+[[EcoGene]]
 |
-[http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=UMPKI-MONOMER EcoCyc:UMPKI-MONOMER]
+EcoGene:EG11539
 |
+''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
 |-
 |
-[http://uniprot.org/ UniProt] ([[UniProt|EcoliWiki Page]])
+[http://www.ncbi.nlm.nih.gov/gene NCBI (Gene)] ([[NCBI (Gene)|EcoliWiki Page]])
 |
-[http://www.uniprot.org/uniprot/P0A7E9 UniProt:P0A7E9]
+[http://www.ncbi.nlm.nih.gov/gene?term=944989 GeneID:944989]
 |
+Escherichia coli str. K-12 substr. MG1655
 |-
 |
-[http://pfam.sanger.ac.uk/ PFAM] ([[PFAM|EcoliWiki Page]])
+[[RegulonDB]]
 |
-[http://pfam.janelia.org/protein/P0A7E9 Pfam:P0A7E9]
+RegulonDB:ECK120001493
 |
+''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
 |-
 |
-[http://www.ncbi.nlm.nih.gov/RefSeq/ RefSeq] ([[RefSeq|EcoliWiki Page]])
+[[EchoBASE]]
 |
-[http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?db=nucleotide&val=NP_414713 RefSeq:NP_414713]
+EchoBASE:EB1501
 |
+''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
 |- class="tableEdit_footer"
@@ Line 1,430: / Line 1,544: @@
 *
 ****************************************************************************************** -->
-{|   id="G46a7b225a800e"  class=" tableEdit Links_table"
+{| border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;"  id="G46a7b225a800e"  class=" tableEdit Links_table"
 |- {{table_heading_style}}
 !|Name!!URL!!Comments

pyrH:Gene Product(s): Difference between revisions

Latest revision as of 20:22, 17 February 2015

Nomenclature

Notes

Function

Notes

Localization

Notes

Structure and Physical Properties

Structure figures

Notes

Gene Product Resources

Notes

Accessions in Other Databases

Notes

Links

References

Categories

Navigation menu

Search