recB:Quickview: Difference between revisions

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*  ** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. **  
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!align=left {{table_heading_style}} |Standard Name
!align=left {{table_heading_style}} |Standard Name
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''recB''  
''recB''
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!align=left {{table_heading_style}} |Gene Synonym(s)
!align=left {{table_heading_style}} |Gene Synonym(s)
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''ECK2816, b2820, JW2788, rorA, ior''<ref name='LIB:Riley_2006'/>
''ECK2816, b2820, JW2788, rorA, ior''<ref name='LIB:Riley_2006'/>, ior''
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!align=left {{table_heading_style}} |Product Desc.
!align=left {{table_heading_style}} |Product Desc.
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!align=left {{table_heading_style}} |Product Synonyms(s)
!align=left {{table_heading_style}} |Product Synonyms(s)
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exonuclease V (RecBCD complex), beta subunit<ref name='LIB:Riley_2006'/>, B2820<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, Ior<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, RorA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, RecB<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
''exonuclease V (RecBCD complex), beta subunit<ref name='LIB:Riley_2006'/>, B2820<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, Ior<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, RorA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, RecB<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , ECK2816, ior, JW2788, rorA, b2820''
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!align=left {{table_heading_style}} |Function from GO
!align=left {{table_heading_style}} |Function from GO
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'''Molecular Function'''
<GO_nr />
* GO:0005524 ATP binding ([http://www.geneontology.org/GO.evidence.shtml IDA])
 
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!align=left {{table_heading_style}} |Knock-Out Phenotype
!align=left {{table_heading_style}} |Knock-Out Phenotype
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!align=left {{table_heading_style}} |Quick Links
!align=left {{table_heading_style}} |Quick Links
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[http://ecoliwiki.net/tools/display_dna.php?gene=recB&loc=MG1655:2954025..2950483,W3110:2954659..2951117,DH10B:3047895..3044353,REL606:2850622..2847080 DNA display]&nbsp;&nbsp;&nbsp; [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=2850622&end=2847080&gene=recB&aa=msdvaetldplrlplqgerlieasagtgktftiaalylrlllglggsaafprpltveellvvtfteaataelrgrirsnihelriaclrettdnplyerlleeiddkaqaaqwlllaerqmdeaavftihgfcqrmlnlnafesgmlfeqqliedesllryqacadfwrrhcyplpreiaqvvfetwkgpqallrdinrylqgeapvikapppddetlasrhaqivaridtvkqqwrdavgeldaliessgidrrkfnrsnqakwidkisawaeeetnsyqlpeslekfsqrfledrtkaggetprhplfeaidqllaeplsirdlvitralaeiretvarekrrrgelgfddmlsrldsalrsesgevlaaairtrfpvamidefqdtdpqqyrifrriwhhqpetallligdpkqaiyafrgadiftymkarsevhahytldtnwrsapgmvnsvnklfsqtddafmfreipfipvksagknqalrfvfkgetqpamkmwlmegescgvgdyqstmaqvcaaqirdwlqagqrgeallmngddarpvrasdisvlvrsrqeaaqvrdaltlleipsvylsnrdsvfetleaqemlwllqavmtperentlrsalatsmmglnaldietlnndehawdvvveefdgyrqiwrkrgvmpmlralmsarniaenllataggerrltdilhisellqeagtqlesehalvrwlsqhilepdsnassqqmrlesdkhlvqivtihkskgleyplvwlpfitnfrvqeqafyhdrhsfeavldlnaapesvdlaeaerlaedlrllyvaltrsvwhcslgvaplvrrrgdkkgdtdvhqsalgrllqkgepqdaaglrtciealcdddiawqtaqtgdnqpwqvndvstaelnaktlqrlpgdnwrvtsysglqqrghgiaqdlmprldvdaagvasvveeptltphqfprgaspgtflhslfedldftqpvdpnwvreklelggfesqwepvltewitavlqaplnetgvslsqlsarnkqvemefylpisepliasqldtlirqfdplsagcpplefmqvrgmlkgfidlvfrhegryylldyksnwlgedssaytqqamaaamqahrydlqyqlytlalhrylrhriadydyehhfggviylflrgvdkehpqqgiyttrpnaglialmdemfagmtleea Protein display]&nbsp;&nbsp;&nbsp; [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=recB+AND+escherichia+coli Pubmed(recB)]&nbsp;&nbsp;&nbsp; [http://trimer.tamu.edu/cgi-bin/textpresso/2.1/ecoli/search?searchstring=recB Textpresso(recB)]
[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=recB&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=EG10824]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120000815&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=recB&loc=MG1655%3A2954025..2950483,W3110%3A2954659..2951117,DH10B%3A3047895..3044353,REL606%3A2850622..2847080,BW2952%3A2837631..2841173]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=2837631&end=2841173&gene=recB&aa=msdvaetldplrlplqgerlieasagtgktftiaalylrlllglggsaafprpltveellvvtfteaataelrgrirsnihelriaclrettdnplyerlleeiddkaqaaqwlllaerqmdeaavftihgfcqrmlnlnafesgmlfeqqliedesllryqacadfwrrhcyplpreiaqvvfetwkgpqallrdinrylqgeapvikapppddetlasrhaqivaridtvkqqwrdavgeldaliessgidrrkfnrsnqakwidkisawaeeetnsyqlpeslekfsqrfledrtkaggetprhplfeaidqllaeplsirdlvitralaeiretvarekrrrgelgfddmlsrldsalrsesgevlaaairtrfpvamidefqdtdpqqyrifrriwhhqpetallligdpkqaiyafrgadiftymkarsevhahytldtnwrsapgmvnsvnklfsqtddafmfreipfipvksagknqalrfvfkgetqpamkmwlmegescgvgdyqstmaqvcaaqirdwlqagqrgeallmngddarpvrasdisvlvrsrqeaaqvrdaltlleipsvylsnrdsvfetleaqemlwllqavmtperentlrsalatsmmglnaldietlnndehawdvvveefdgyrqiwrkrgvmpmlralmsarniaenllataggerrltdilhisellqeagtqlesehalvrwlsqhilepdsnassqqmrlesdkhlvqivtihkskgleyplvwlpfitnfrvqeqafyhdrhsfeavldlnaapesvdlaeaerlaedlrllyvaltrsvwhcslgvaplvrrrgdkkgdtdvhqsalgrllqkgepqdaaglrtciealcdddiawqtaqtgdnqpwqvndvstaelnaktlqrlpgdnwrvtsysglqqrghgiaqdlmprldvdaagvasvveeptltphqfprgaspgtflhslfedldftqpvdpnwvreklelggfesqwepvltewitavlqaplnetgvslsqlsarnkqvemefylpisepliasqldtlirqfdplsagcpplefmqvrgmlkgfidlvfrhegryylldyksnwlgedssaytqqamaaamqahrydlqyqlytlalhrylrhriadydyehhfggviylflrgvdkehpqqgiyttrpnaglialmdemfagmtleea]]&nbsp;&nbsp; [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=recB+AND+escherichia+coli]]&nbsp;&nbsp; [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=recB]]&nbsp;&nbsp;


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Latest revision as of 21:56, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Standard Name

recB

Gene Synonym(s)

ECK2816, b2820, JW2788, rorA, ior[1], ior

Product Desc.

RecB; DNA helicase, ATP-dependent dsDNA/ssDNA exonuclease V subunit, ssDNA endonuclease[2][3];

Component of recBCD[2][3]

RecBCD Exonuclease V subunit, recombination and repair; chi-activated RecBCD recombinase subunit; RecBCD 3'-5' slow helicase subunit; contains nuclease active site and ATP-binding site; RecB alone has 3'-5' helicase activity; binds RecC[4]

Product Synonyms(s)

exonuclease V (RecBCD complex), beta subunit[1], B2820[2][1], Ior[2][1], RorA[2][1], RecB[2][1] , ECK2816, ior, JW2788, rorA, b2820

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): recD[2]

Regulation/Activity
Quick Links



        

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Notes

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RecBCD is a bipolar helicase.[4]



References

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  1. ↑ 1.0 1.1 1.2 1.3 1.4 1.5 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 2.5 2.6 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ 3.0 3.1 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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