ynjE:Gene Product(s)
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| Quickview | Gene | Gene Product(s) | Expression | Evolution | On One Page |
| Nomenclature | Function | Interactions | Localization | Sequence | Domains | Structure | Resources | Accessions | Links | References | Suggestions |
Nomenclature
See Help:Product_nomenclature for help entering or editing information in this section of EcoliWiki.
| Standard name |
YnjE |
|---|---|
| Synonyms |
predicted thiosulfate sulfur transferase[1], B1757[2][1], YnjE[2][1] , ECK1755, JW5287, b1757 |
| Product description |
predicted thiosulfate sulfur transferase[2][3] Rhodanese-like protein, function unknown; possible lipoprotein, Cys conserved[4] |
| EC number (for enzymes) |
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Notes
Function
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Gene Ontology
See Help:Gene_ontology for help entering or editing GO terms and GO annotations in EcoliWiki.
| Qualifier | GO ID | GO term name | Reference | Evidence Code | with/from | Aspect | Notes | Status |
|---|---|---|---|---|---|---|---|---|
| GO:0004792 |
thiosulfate sulfurtransferase activity |
GOA:interpro |
IEA: Inferred from Electronic Annotation |
F |
Seeded from EcoCyc (v14.0) |
complete | ||
| GO:0004792 |
thiosulfate sulfurtransferase activity |
GOA:spec |
IEA: Inferred from Electronic Annotation |
F |
Seeded from EcoCyc (v14.0) |
complete | ||
| GO:0008272 |
sulfate transport |
GOA:interpro |
IEA: Inferred from Electronic Annotation |
P |
Seeded from EcoCyc (v14.0) |
complete | ||
| GO:0016783 |
sulfurtransferase activity |
IDA: Inferred from Direct Assay |
F |
Seeded from EcoCyc (v14.0) |
complete | |||
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Interactions See Help:Product_interactions for help entering or editing information about gene product interactions in this section of EcoliWiki.
| Partner Type | Partner | Notes | References | Evidence |
|---|---|---|---|---|
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Notes
Localization
See Help:Product_localization for how to add or edit information in this section of EcoliWiki.
| Compartment | Description | Evidence | Reference/Source | Notes |
|---|---|---|---|---|
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Notes
Structure and Physical Properties
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Physical Properties
See Help:Product_physical_properties for help entering or editing information about the physical properties of this gene product.
| Name | |
|---|---|
| Sequence |
MSGFSMKRVS QMTALAMALG LACASSWAAE LAKPLTLDQL QQQNGKAIDT RPSAFYNGWP QTLNGPSGHE LAALNLSASW LDKMSTEQLN AWIKQHNLKT DAPVALYGND KDVDAVKTRL QKAGLTHISI LSDALSEPSR LQKLPHFEQL VYPQWLHDLQ QGKEVTAKPA GDWKVIEAAW GAPKLYLISH IPGADYIDTN EVESEPLWNK VSDEQLKAML AKHGIRHDTT VILYGRDVYA AARVAQIMLY AGVKDVRLLD GGWQTWSDAG LPVERGTPPK VKAEPDFGVK IPAQPQLMLD MEQARGLLHR QDASLVSIRS WPEFIGTTSG YSYIKPKGEI AGARWGHAGS DSTHMEDFHN PDGTMRSADD ITAMWKAWNI KPEQQVSFYC GTGWRASETF MYARAMGWKN VSVYDGGWYE WSSDPKNPVA TGERGPDSSK |
| Length |
440 |
| Mol. Wt |
48.738 kDa |
| pI |
6.7 (calculated) |
| Extinction coefficient |
119,860 - 120,110 (calc based on 14 Y, 18 W, and 2 C residues) |
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Domains/Motifs/Modification Sites
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Structure
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Structure figures<protect> | ||||||
Notes
A crystal structure was described by Hanzelman et al [5] in 2009.
Gene Product Resources
See Help:Product_resources for help with entering or editing information in this section of EcoliWiki.
| Resource type | Source | Notes/Reference |
|---|---|---|
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Notes
Accessions in Other Databases
See Help:Gene_accessions for help with entering information into the Gene Accessions table.
| Database | Accession | Notes |
|---|---|---|
|
Escherichia coli str. K-12 substr. MG1655 | ||
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Escherichia coli str. K-12 substr. MG1655 | ||
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Escherichia coli str. K-12 substr. MG1655 | ||
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Escherichia coli str. K-12 substr. MG1655 | ||
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Escherichia coli str. K-12 substr. MG1655 | ||
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Escherichia coli str. K-12 substr. MG1655 | ||
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Escherichia coli str. K-12 substr. MG1655 | ||
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Escherichia coli str. K-12 substr. MG1655 | ||
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Escherichia coli str. K-12 substr. MG1655 | ||
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Notes
Links
| Name | URL | Comments |
|---|---|---|
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References
See Help:References for how to manage references in EcoliWiki.
- ↑ 1.0 1.1 1.2 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
- ↑ 2.0 2.1 2.2 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
- ↑ 5.0 5.1 Hänzelmann, P et al. (2009) Crystal structure of YnjE from Escherichia coli, a sulfurtransferase with three rhodanese domains. Protein Sci. 18 2480-91 PubMed
- ↑ 6.0 6.1 Finn, RD et al. (2010) The Pfam protein families database. Nucleic Acids Res. 38 D211-22 PubMed
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