yjaZ:Gene Product(s)
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| Quickview | Gene | Gene Product(s) | Expression | Evolution | On One Page |
| Nomenclature | Function | Interactions | Localization | Sequence | Domains | Structure | Resources | Accessions | Links | References | Suggestions |
Nomenclature
See Help:Product_nomenclature for help entering or editing information in this section of EcoliWiki.
| Standard name |
YjaZ[1] |
|---|---|
| Synonyms |
heat shock protein[2], B3989[3][2], HtrC[3][2], YjaZ[3][2] , ECK3980, htrC, JW3952, b3989 |
| Product description |
heat shock protein[3]; conserved protein[4] Required for competitive stationary phase growth adaptation; function unknown[5] |
| EC number (for enzymes) |
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| edit table |
Notes
The product of yjaZ was once thought to encode the product HtrC, but has since be reevaluated.
See the Summary section on the EcoCyc page.
Function
Gene Ontology
See Help:Gene_ontology for help entering or editing GO terms and GO annotations in EcoliWiki.
| Qualifier | GO ID | GO term name | Reference | Evidence Code | with/from | Aspect | Notes | Status |
|---|---|---|---|---|---|---|---|---|
|
NOT |
GO:0009408 |
response to heat |
IDA: Inferred from Direct Assay |
P |
This paper shows that the temperature-sensitive phenotype previously described for htrC::Tn5 mutants[6] is not due to disruption of htrC. |
complete | ||
| GO:0006950 |
response to stress |
GOA:spkw |
IEA: Inferred from Electronic Annotation |
P |
Seeded from EcoCyc (v14.0) |
complete | ||
| edit table |
Interactions See Help:Product_interactions for help entering or editing information about gene product interactions in this section of EcoliWiki.
| Partner Type | Partner | Notes | References | Evidence |
|---|---|---|---|---|
| edit table |
Notes
Localization
See Help:Product_localization for how to add or edit information in this section of EcoliWiki.
| Compartment | Description | Evidence | Reference/Source | Notes |
|---|---|---|---|---|
| edit table |
Notes
Structure and Physical Properties
Physical Properties See Help:Product_physical_properties for help entering or editing information about the physical properties of this gene product.
| Name | |
|---|---|
| Sequence |
MKQEVEKWRP FGHPDGDIRD LSFLDAHQAV YVQHHEGKEP LEYRFWVTYS LHCFTKDYEH QTNEEKQSLM YHAPKESRPF CQHRYNLART HLKRTILALP ESNVIHAGYG SYAVIEVDLD GGDKAFYFVA FRAFREKKKL RLHVTSAYPI SEKQKGKSVK FFTIAYNLLR NKQLPQPSK |
| Length |
179 |
| Mol. Wt |
21.13 kDa |
| pI |
9.6 (calculated) |
| Extinction coefficient |
27,390 - 27,640 (calc based on 11 Y, 2 W, and 2 C residues) |
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Domains/Motifs/Modification Sites
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<motif_map/> |
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Structure
|
Structure figures
Notes
Gene Product Resources
See Help:Product_resources for help with entering or editing information in this section of EcoliWiki.
| Resource type | Source | Notes/Reference |
|---|---|---|
| edit table |
Notes
Accessions in Other Databases
See Help:Gene_accessions for help with entering information into the Gene Accessions table.
| Database | Accession | Notes |
|---|---|---|
|
Escherichia coli str. K-12 substr. MG1655 | ||
|
Escherichia coli str. K-12 substr. MG1655 | ||
|
Escherichia coli str. K-12 substr. MG1655 | ||
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Escherichia coli str. K-12 substr. MG1655 | ||
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Escherichia coli str. K-12 substr. MG1655 | ||
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Escherichia coli str. K-12 substr. MG1655 | ||
|
Escherichia coli str. K-12 substr. MG1655 | ||
|
Escherichia coli str. K-12 substr. MG1655 | ||
|
Escherichia coli str. K-12 substr. MG1655 | ||
| edit table |
Notes
Links
| Name | URL | Comments |
|---|---|---|
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References
See Help:References for how to manage references in EcoliWiki.
- ↑ 1.0 1.1 Thacker, Z et al. (2006) The Escherichia coli rpoS-dependent htrC gene is not involved in the heat shock response. J. Bacteriol. 188 8317-20 PubMed
- ↑ 2.0 2.1 2.2 2.3 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
- ↑ 3.0 3.1 3.2 3.3 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
- ↑ Raina, S & Georgopoulos, C (1990) A new Escherichia coli heat shock gene, htrC, whose product is essential for viability only at high temperatures. J. Bacteriol. 172 3417-26 PubMed
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