yjaZ:Gene Product(s)
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| Quickview | Gene | Gene Product(s) | Expression | Evolution | On One Page |
| Nomenclature | Function | Interactions | Localization | Sequence | Domains | Structure | Resources | Accessions | Links | References | Suggestions |
Nomenclature
See Help:Product_nomenclature for help entering or editing information in this section of EcoliWiki.
| Standard name |
YjaZ[1] |
|---|---|
| Synonyms |
heat shock protein[2], B3989[3][2], HtrC[3][2], YjaZ[3][2] , ECK3980, htrC, JW3952, b3989 |
| Product description |
heat shock protein[3]; conserved protein[4] Required for competitive stationary phase growth adaptation; function unknown[5] |
| EC number (for enzymes) |
|
| edit table |
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Notes
The product of yjaZ was once thought to encode the product HtrC, but has since be reevaluated.
See the Summary section on the EcoCyc page.
Function
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Gene Ontology
See Help:Gene_ontology for help entering or editing GO terms and GO annotations in EcoliWiki.
| Qualifier | GO ID | GO term name | Reference | Evidence Code | with/from | Aspect | Notes | Status |
|---|---|---|---|---|---|---|---|---|
|
NOT |
GO:0009408 |
response to heat |
IDA: Inferred from Direct Assay |
P |
This paper shows that the temperature-sensitive phenotype previously described for htrC::Tn5 mutants[6] is not due to disruption of htrC. |
complete | ||
| GO:0006950 |
response to stress |
GOA:spkw |
IEA: Inferred from Electronic Annotation |
P |
Seeded from EcoCyc (v14.0) |
complete | ||
| edit table |
Interactions See Help:Product_interactions for help entering or editing information about gene product interactions in this section of EcoliWiki.
| Partner Type | Partner | Notes | References | Evidence |
|---|---|---|---|---|
| edit table |
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Notes
Localization
See Help:Product_localization for how to add or edit information in this section of EcoliWiki.
| Compartment | Description | Evidence | Reference/Source | Notes |
|---|---|---|---|---|
| edit table |
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Notes
Structure and Physical Properties
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Physical Properties
See Help:Product_physical_properties for help entering or editing information about the physical properties of this gene product.
| Name | |
|---|---|
| Sequence |
MKQEVEKWRP FGHPDGDIRD LSFLDAHQAV YVQHHEGKEP LEYRFWVTYS LHCFTKDYEH QTNEEKQSLM YHAPKESRPF CQHRYNLART HLKRTILALP ESNVIHAGYG SYAVIEVDLD GGDKAFYFVA FRAFREKKKL RLHVTSAYPI SEKQKGKSVK FFTIAYNLLR NKQLPQPSK |
| Length |
179 |
| Mol. Wt |
21.13 kDa |
| pI |
9.6 (calculated) |
| Extinction coefficient |
27,390 - 27,640 (calc based on 11 Y, 2 W, and 2 C residues) |
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Domains/Motifs/Modification Sites
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|
<motif_map/> |
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Structure
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Structure figures<protect> | ||||||
Notes
Gene Product Resources
See Help:Product_resources for help with entering or editing information in this section of EcoliWiki.
| Resource type | Source | Notes/Reference |
|---|---|---|
| edit table |
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Notes
Accessions in Other Databases
See Help:Gene_accessions for help with entering information into the Gene Accessions table.
| Database | Accession | Notes |
|---|---|---|
|
Escherichia coli str. K-12 substr. MG1655 | ||
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Escherichia coli str. K-12 substr. MG1655 | ||
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Escherichia coli str. K-12 substr. MG1655 | ||
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Escherichia coli str. K-12 substr. MG1655 | ||
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Escherichia coli str. K-12 substr. MG1655 | ||
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Escherichia coli str. K-12 substr. MG1655 | ||
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Escherichia coli str. K-12 substr. MG1655 | ||
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Escherichia coli str. K-12 substr. MG1655 | ||
|
Escherichia coli str. K-12 substr. MG1655 | ||
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Notes
Links
| Name | URL | Comments |
|---|---|---|
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References
See Help:References for how to manage references in EcoliWiki.
- ↑ 1.0 1.1 Thacker, Z et al. (2006) The Escherichia coli rpoS-dependent htrC gene is not involved in the heat shock response. J. Bacteriol. 188 8317-20 PubMed
- ↑ 2.0 2.1 2.2 2.3 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
- ↑ 3.0 3.1 3.2 3.3 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
- ↑ Raina, S & Georgopoulos, C (1990) A new Escherichia coli heat shock gene, htrC, whose product is essential for viability only at high temperatures. J. Bacteriol. 172 3417-26 PubMed
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