map:Gene Product(s)

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
Nomenclature Function Interactions Localization Sequence Domains Structure Resources Accessions Links References Suggestions

Nomenclature

See Help:Product_nomenclature for help entering or editing information in this section of EcoliWiki.

Standard name

Map

Synonyms

methionine aminopeptidase[1], B0168[2][1], Map[2][1] , ECK0166, JW0163, pepM, b0168

Product description

methionine aminopeptidase[2][3]

Methionine aminopeptidase[4]

EC number (for enzymes)
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Notes

Function

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<protect> Gene Ontology
See Help:Gene_ontology for help entering or editing GO terms and GO annotations in EcoliWiki.

Qualifier GO ID GO term name Reference Evidence Code with/from Aspect Notes Status
GO:0005737

cytoplasm

C

Seeded from Riley et al 2006 [1].

Missing: evidence, reference

GO:0006457

protein folding

P

Seeded from Riley et al 2006 [1].

Missing: evidence, reference

GO:0006508

proteolysis

GOA:interpro
GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR001714

P

Seeded from EcoCyc (v14.0)

complete

GO:0006508

proteolysis

GOA:interpro
GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR002467

P

Seeded from EcoCyc (v14.0)

complete

GO:0050897

cobalt ion binding

GOA:spkw
SP_KW:GO_REF:0000004

IEA: Inferred from Electronic Annotation

SP_KW:KW-0170

F

Seeded from EcoCyc (v14.0)

complete

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Interactions See Help:Product_interactions for help entering or editing information about gene product interactions in this section of EcoliWiki.

Partner Type Partner Notes References Evidence

Protein

deaD

PMID:15690043[5]

Experiment(s):EBI-886162

Protein

recE

PMID:15690043[5]

Experiment(s):EBI-886162

Protein

rplD

PMID:15690043[5]

Experiment(s):EBI-886162

Protein

rplI

PMID:15690043[5]

Experiment(s):EBI-886162

Protein

rplL

PMID:15690043[5]

Experiment(s):EBI-886162

Protein

rplM

PMID:15690043[5]

Experiment(s):EBI-886162

Protein

rplS

PMID:15690043[5]

Experiment(s):EBI-886162

Protein

rplV

PMID:15690043[5]

Experiment(s):EBI-886162

Protein

rplW

PMID:15690043[5]

Experiment(s):EBI-886162

Protein

rpmB

PMID:15690043[5]

Experiment(s):EBI-886162

Protein

rpmG

PMID:15690043[5]

Experiment(s):EBI-886162

Protein

rpsB

PMID:15690043[5]

Experiment(s):EBI-886162

Protein

rpsE

PMID:15690043[5]

Experiment(s):EBI-886162

Protein

rpsJ

PMID:15690043[5]

Experiment(s):EBI-886162

Protein

rpsP

PMID:15690043[5]

Experiment(s):EBI-886162

Protein

rpsT

PMID:15690043[5]

Experiment(s):EBI-886162

Protein

uidR

PMID:15690043[5]

Experiment(s):EBI-886162

Protein

yeaP

PMID:15690043[5]

Experiment(s):EBI-886162

Protein

mdtB

PMID:15690043[5]

Experiment(s):EBI-886162

Protein

yhbY

PMID:15690043[5]

Experiment(s):EBI-886162

Protein

maa

PMID:15690043[5]

Experiment(s):EBI-886162

Protein

gshB

PMID:16606699[6]

Experiment(s):EBI-1135767

Protein

recE

PMID:19402753[7]

LCMS(ID Probability):99.0

Protein

maa

PMID:19402753[7]

LCMS(ID Probability):99.0

Protein

mdtB

PMID:19402753[7]

LCMS(ID Probability):99.0

Protein

uidR

PMID:19402753[7]

LCMS(ID Probability):99.0

Protein

yeaP

PMID:19402753[7]

LCMS(ID Probability):99.0

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Notes

Localization

See Help:Product_localization for how to add or edit information in this section of EcoliWiki.

Compartment Description Evidence Reference/Source Notes
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Notes

Structure and Physical Properties

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<protect> Physical Properties See Help:Product_physical_properties for help entering or editing information about the physical properties of this gene product.

Name
Sequence

at EcoCyc 

MAISIKTPED IEKMRVAGRL AAEVLEMIEP YVKPGVSTGE LDRICNDYIV NEQHAVSACL
GYHGYPKSVC ISINEVVCHG IPDDAKLLKD GDIVNIDVTV IKDGFHGDTS KMFIVGKPTI
MGERLCRITQ ESLYLALRMV KPGINLREIG AAIQKFVEAE GFSVVREYCG HGIGRGFHEE
PQVLHYDSRE TNVVLKPGMT FTIEPMVNAG KKEIRTMKDG WTVKTKDRSL SAQYEHTIVV
TDNGCEILTL RKDDTIPAII SHDE
Length

264

Mol. Wt

29.33 kDa

pI

5.9 (calculated)

Extinction coefficient

17,420 - 18,295 (calc based on 8 Y, 1 W, and 7 C residues)

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Domains/Motifs/Modification Sites

See Help:Product_domains_motifs for help entering or editing information in this section of EcoliWiki.

Type Residues Description Notes References

Initiator Methionine

1

Removed

UniProt:P0AE18

Domain

12..242

PF00557 Metallopeptidase family M24

PMID:19920124[8]

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Structure
See Help:Product_structure for help entering or editing information in this section of EcoliWiki.

Structures

<beststructure> gene=map taxon=562,83333 </beststructure>

Models

View models at:

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Structure figures

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Notes

Gene Product Resources

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See Help:Product_resources for help with entering or editing information in this section of EcoliWiki.

Resource type Source Notes/Reference
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Notes

Accessions in Other Databases

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

NCBI (Protein) (EcoliWiki Page)

GI:16128161

Escherichia coli str. K-12 substr. MG1655

NCBI (Protein) (EcoliWiki Page)

GeneID:947882

Escherichia coli str. K-12 substr. MG1655

ASAP

ASAP:ABE-0000571

Escherichia coli str. K-12 substr. MG1655

UniProt (EcoliWiki Page)

UniProtKB/Swiss-Prot:P0AE18

Escherichia coli str. K-12 substr. MG1655

EcoCyc

EcoCyc:EG10570

Escherichia coli str. K-12 substr. MG1655

EcoGene

EcoGene:EG10570

Escherichia coli str. K-12 substr. MG1655

NCBI (Gene) (EcoliWiki Page)

GeneID:947882

Escherichia coli str. K-12 substr. MG1655

RegulonDB

RegulonDB:ECK120000563

Escherichia coli str. K-12 substr. MG1655

EchoBASE

EchoBASE:EB0565

Escherichia coli str. K-12 substr. MG1655

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Notes

Links

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References

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See Help:References for how to manage references in EcoliWiki.

  1. ↑ 1.0 1.1 1.2 1.3 1.4 1.5 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
  5. ↑ 5.00 5.01 5.02 5.03 5.04 5.05 5.06 5.07 5.08 5.09 5.10 5.11 5.12 5.13 5.14 5.15 5.16 5.17 5.18 5.19 5.20 Butland, G et al. (2005) Interaction network containing conserved and essential protein complexes in Escherichia coli. Nature 433 531-7 PubMed
  6. ↑ Arifuzzaman, M et al. (2006) Large-scale identification of protein-protein interaction of Escherichia coli K-12. Genome Res. 16 686-91 PubMed
  7. ↑ 7.0 7.1 7.2 7.3 7.4 Hu, P et al. (2009) Global functional atlas of Escherichia coli encompassing previously uncharacterized proteins. PLoS Biol. 7 e96 PubMed
  8. ↑ Finn, RD et al. (2010) The Pfam protein families database. Nucleic Acids Res. 38 D211-22 PubMed

Categories

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