insO-2:Gene Product(s)

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Nomenclature Function Interactions Localization Sequence Domains Structure Resources Accessions Links References Suggestions

Nomenclature

See Help:Product_nomenclature for help entering or editing information in this section of EcoliWiki.

Standard name

InsO

InsO-1

Synonyms

CP4-6 prophage; partial transposase of insertion element IS911A, interrupted by insertion of IS30 element.[1], B0257[2][1]

B4285[2], InsO-2[2]

Product description

CP4-6 prophage; partial transposase of insertion element IS911A, interrupted by insertion of IS30 element[2][3]

KpLE2 phage-like element; partial transposase[2][3]

EC number (for enzymes)
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Notes

Function

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<protect> Gene Ontology

CP4-6 prophage; partial transposase of insertion element IS911A, interrupted by insertion of IS30 element

See Help:Gene_ontology for help entering or editing GO terms and GO annotations in EcoliWiki.

Qualifier GO ID GO term name Reference Evidence Code with/from Aspect Notes Status
GO:0003676

nucleic acid binding

GOA:interpro
GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR012337

F

Seeded from EcoCyc (v14.0)

complete

GO:0003677

DNA binding

GOA:interpro
GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR001584

F

Seeded from EcoCyc (v14.0)

complete

GO:0003677

DNA binding

GOA:spkw
SP_KW:GO_REF:0000004

IEA: Inferred from Electronic Annotation

SP_KW:KW-0238

F

Seeded from EcoCyc (v14.0)

complete

GO:0006310

DNA recombination

GOA:spkw
SP_KW:GO_REF:0000004

IEA: Inferred from Electronic Annotation

SP_KW:KW-0233

P

Seeded from EcoCyc (v14.0)

complete

GO:0015074

DNA integration

GOA:interpro
GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR001584

P

Seeded from EcoCyc (v14.0)

complete

GO:0032196

transposition

GOA:spkw
SP_KW:GO_REF:0000004

IEA: Inferred from Electronic Annotation

SP_KW:KW-0815

P

Seeded from EcoCyc (v14.0)

complete

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Interactions

CP4-6 prophage; partial transposase of insertion element IS911A, interrupted by insertion of IS30 element

See Help:Product_interactions for help entering or editing information about gene product interactions in this section of EcoliWiki.

Partner Type Partner Notes References Evidence
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Notes

Localization

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Compartment Description Evidence Reference/Source Notes
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Notes

Structure and Physical Properties

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<protect> Physical Properties See Help:Product_physical_properties for help entering or editing information about the physical properties of this gene product.

Name
Sequence

at EcoCyc 

MATLCHVFGV HRSSYKYWKN RPEKPDGRRA VLRSQVLELH GISHGSAGAR SIATMATQRG
YQMGRWLAGR LMKELGLVSC QQPTHRYKRG GHEHVAIPNH LERQFAVTEP NQVWCGDVTY
SVPGVQGGHG CLNEPRVCLE Y

at EcoCyc 

MPFYFRKECP LNSGYLRKNR PEKPDGRRAV LRSQVLELHG ISHGSAGARS IATMATRRGY
QMGRWLAGRL MKELGLVSCQ QPTHRYKRGG HEHVAIPNYL ERQFAVTEPN QVWCGDVTYI
WTGKRWAYLA VVLDLFARKP VGWAMSFSPD SRLTMKALEM AWETRGKPVG VMFQAIKAVI
IRAGSSGSYC GDTGSGRV
Length

141

198

Mol. Wt

15.848 kDa

22.264 kDa

pI

9.8 (calculated)

10.6 (calculated)

Extinction coefficient

25,440 - 26,065 (calc based on 6 Y, 3 W, and 5 C residues)

44,920 - 45,420 (calc based on 8 Y, 6 W, and 4 C residues)

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Domains/Motifs/Modification Sites

See Help:Product_domains_motifs for help entering or editing information in this section of EcoliWiki.

Type Residues Description Notes References
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Structure
See Help:Product_structure for help entering or editing information in this section of EcoliWiki.

Structures

<beststructure> gene=insO-2 taxon=562,83333 </beststructure>

Models

View models at:

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Structure figures

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Notes

Gene Product Resources

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See Help:Product_resources for help with entering or editing information in this section of EcoliWiki.

Resource type Source Notes/Reference
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Notes

Accessions in Other Databases

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes
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Notes

Links

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References

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See Help:References for how to manage references in EcoliWiki.

  1. ↑ 1.0 1.1 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ 3.0 3.1 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7

Categories

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