hinT:Gene Product(s)

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Nomenclature Function Interactions Localization Sequence Domains Structure Resources Accessions Links References Suggestions

Nomenclature

See Help:Product_nomenclature for help entering or editing information in this section of EcoliWiki.

Standard name

HinT

Synonyms

purine nucleoside phosphoramidase[1], B1103[2][1], YcfF[2][1], HinT[2][1] , ECK1089, JW1089, ycfF, b1103

Product description

purine nucleoside phosphoramidase[2][3]

Purine nucleoside phosphoramidase; aminoacyl-adenylate hydrolase; physological role unknown[4]

EC number (for enzymes)


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Notes

Function

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<protect> Gene Ontology
See Help:Gene_ontology for help entering or editing GO terms and GO annotations in EcoliWiki.

Qualifier GO ID GO term name Reference Evidence Code with/from Aspect Notes Status

Interactions See Help:Product_interactions for help entering or editing information about gene product interactions in this section of EcoliWiki.

Partner Type Partner Notes References Evidence

Protein

dnaK

PMID:15690043[5]

Experiment(s):EBI-888025

Protein

dnaN

PMID:15690043[5]

Experiment(s):EBI-888025

Protein

tufA

PMID:15690043[5]

Experiment(s):EBI-888025

Protein

ydeP

PMID:15690043[5]

Experiment(s):EBI-893639

Protein

mltD

PMID:15690043[5]

Experiment(s):EBI-893639

Protein

yjhH

PMID:15690043[5]

Experiment(s):EBI-893639

Protein

nadE

PMID:16606699[6]

Experiment(s):EBI-1138875

Protein

yhbJ

PMID:16606699[6]

Experiment(s):EBI-1138875

Protein

nuoI

PMID:16606699[6]

Experiment(s):EBI-1138875

Protein

tpx

PMID:16606699[6]

Experiment(s):EBI-1138875

Protein

accA

PMID:16606699[6]

Experiment(s):EBI-1138875

Protein

atpG

PMID:16606699[6]

Experiment(s):EBI-1138875

Protein

mukB

PMID:16606699[6]

Experiment(s):EBI-1138875

Protein

mltD

PMID:19402753[7]

LCMS(ID Probability):99.6

Protein

dnaN

PMID:19402753[7]

MALDI(Z-score):37.284431

Protein

ydeP

PMID:19402753[7]

LCMS(ID Probability):99.6

Protein

yjhH

PMID:19402753[7]

LCMS(ID Probability):99.6

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Notes

Localization

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Compartment Description Evidence Reference/Source Notes

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Notes

Structure and Physical Properties

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<protect> Physical Properties See Help:Product_physical_properties for help entering or editing information about the physical properties of this gene product.

Name
Sequence

at EcoCyc

MAEETIFSKI IRREIPSDIV YQDDLVTAFR DISPQAPTHI LIIPNILIPT VNDVSAEHEQ
ALGRMITVAA KIAEQEGIAE DGYRLIMNTN RHGGQEVYHI HMHLLGGRPL GPMLAHKGL
Length

119

Mol. Wt

13.241 kDa

pI

6.1 (calculated)

Extinction coefficient

4,470 (calc based on 3 Y, 0 W, and 0 C residues)


Domains/Motifs/Modification Sites

See Help:Product_domains_motifs for help entering or editing information in this section of EcoliWiki.

Type Residues Description Notes References

Modification Site

33

phosphorylation site at S33

probability less than 75%

PMID:17938405[8]

Modification Site

38

phosphorylation site at T38

probability less than 75%

PMID:17938405[8]

Domain

12..110

PF01230 HIT domain

PMID:19920124[9]

<motif_map/>

Structure
See Help:Product_structure for help entering or editing information in this section of EcoliWiki.

Structures

<beststructure> gene=hinT taxon=562,83333 </beststructure>

Models

View models at:

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Structure figures

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Notes

Gene Product Resources

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See Help:Product_resources for help with entering or editing information in this section of EcoliWiki.

Resource type Source Notes/Reference

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Notes

Accessions in Other Databases

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

NCBI (Protein) (EcoliWiki Page)

GI:49176077

Escherichia coli str. K-12 substr. MG1655

NCBI (Protein) (EcoliWiki Page)

GeneID:948549

Escherichia coli str. K-12 substr. MG1655

ASAP

ASAP:ABE-0003729

Escherichia coli str. K-12 substr. MG1655

UniProt (EcoliWiki Page)

UniProtKB/Swiss-Prot:P0ACE7

Escherichia coli str. K-12 substr. MG1655

EcoCyc

EcoCyc:EG12172

Escherichia coli str. K-12 substr. MG1655

EcoGene

EcoGene:EG12172

Escherichia coli str. K-12 substr. MG1655

NCBI (Gene) (EcoliWiki Page)

GeneID:948549

Escherichia coli str. K-12 substr. MG1655

RegulonDB

RegulonDB:ECK120002067

Escherichia coli str. K-12 substr. MG1655

EchoBASE

EchoBASE:EB2090

Escherichia coli str. K-12 substr. MG1655

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Notes

Links

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References

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See Help:References for how to manage references in EcoliWiki.

  1. 1.0 1.1 1.2 1.3 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. 2.0 2.1 2.2 2.3 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
  5. 5.0 5.1 5.2 5.3 5.4 5.5 Butland, G et al. (2005) Interaction network containing conserved and essential protein complexes in Escherichia coli. Nature 433 531-7 PubMed
  6. 6.0 6.1 6.2 6.3 6.4 6.5 6.6 Arifuzzaman, M et al. (2006) Large-scale identification of protein-protein interaction of Escherichia coli K-12. Genome Res. 16 686-91 PubMed
  7. 7.0 7.1 7.2 7.3 Hu, P et al. (2009) Global functional atlas of Escherichia coli encompassing previously uncharacterized proteins. PLoS Biol. 7 e96 PubMed
  8. 8.0 8.1 Macek, B et al. (2008) Phosphoproteome analysis of E. coli reveals evolutionary conservation of bacterial Ser/Thr/Tyr phosphorylation. Mol. Cell Proteomics 7 299-307 PubMed
  9. Finn, RD et al. (2010) The Pfam protein families database. Nucleic Acids Res. 38 D211-22 PubMed

Categories

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