glvC:Gene Product(s)
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| Quickview | Gene | Gene Product(s) | Expression | Evolution | On One Page |
| Nomenclature | Function | Interactions | Localization | Sequence | Domains | Structure | Resources | Accessions | Links | References | Suggestions |
Nomenclature
See Help:Product_nomenclature for help entering or editing information in this section of EcoliWiki.
| Standard name |
GlvC |
|---|---|
| Synonyms |
arbutin sp ecific enzyme IIC component of PTS[1], B3683[2][1], YidO[2][1], GlvC[2][1], PtiC[3][1] , ECK3674, glvB, JW3659, yidN, yidO, b3683 |
| Product description | |
| EC number (for enzymes) | |
| edit table |
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Notes
Function
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Gene Ontology
See Help:Gene_ontology for help entering or editing GO terms and GO annotations in EcoliWiki.
| Qualifier | GO ID | GO term name | Reference | Evidence Code | with/from | Aspect | Notes | Status |
|---|---|---|---|---|---|---|---|---|
| GO:0005351 |
sugar:hydrogen symporter activity |
GOA:interpro |
IEA: Inferred from Electronic Annotation |
F |
Seeded from EcoCyc (v14.0) |
complete | ||
| GO:0005886 |
plasma membrane |
GOA:spkw |
IEA: Inferred from Electronic Annotation |
C |
Seeded from EcoCyc (v14.0) |
complete | ||
| GO:0005886 |
plasma membrane |
GOA:spkw |
IEA: Inferred from Electronic Annotation |
C |
Seeded from EcoCyc (v14.0) |
complete | ||
| GO:0006810 |
transport |
GOA:spkw |
IEA: Inferred from Electronic Annotation |
P |
Seeded from EcoCyc (v14.0) |
complete | ||
| GO:0008643 |
carbohydrate transport |
GOA:spkw |
IEA: Inferred from Electronic Annotation |
P |
Seeded from EcoCyc (v14.0) |
complete | ||
| GO:0008982 |
protein-N(PI)-phosphohistidine-sugar phosphotransferase activity |
GOA:interpro |
IEA: Inferred from Electronic Annotation |
F |
Seeded from EcoCyc (v14.0) |
complete | ||
| GO:0008982 |
protein-N(PI)-phosphohistidine-sugar phosphotransferase activity |
GOA:interpro |
IEA: Inferred from Electronic Annotation |
F |
Seeded from EcoCyc (v14.0) |
complete | ||
| GO:0008982 |
protein-N(PI)-phosphohistidine-sugar phosphotransferase activity |
GOA:interpro |
IEA: Inferred from Electronic Annotation |
F |
Seeded from EcoCyc (v14.0) |
complete | ||
| GO:0009401 |
phosphoenolpyruvate-dependent sugar phosphotransferase system |
GOA:interpro |
IEA: Inferred from Electronic Annotation |
P |
Seeded from EcoCyc (v14.0) |
complete | ||
| GO:0009401 |
phosphoenolpyruvate-dependent sugar phosphotransferase system |
GOA:interpro |
IEA: Inferred from Electronic Annotation |
P |
Seeded from EcoCyc (v14.0) |
complete | ||
| GO:0009401 |
phosphoenolpyruvate-dependent sugar phosphotransferase system |
GOA:interpro |
IEA: Inferred from Electronic Annotation |
P |
Seeded from EcoCyc (v14.0) |
complete | ||
| GO:0009401 |
phosphoenolpyruvate-dependent sugar phosphotransferase system |
GOA:spkw |
IEA: Inferred from Electronic Annotation |
P |
Seeded from EcoCyc (v14.0) |
complete | ||
| GO:0016020 |
membrane |
GOA:interpro |
IEA: Inferred from Electronic Annotation |
C |
Seeded from EcoCyc (v14.0) |
complete | ||
| GO:0016020 |
membrane |
GOA:spkw |
IEA: Inferred from Electronic Annotation |
C |
Seeded from EcoCyc (v14.0) |
complete | ||
| GO:0016021 |
integral to membrane |
GOA:interpro |
IEA: Inferred from Electronic Annotation |
C |
Seeded from EcoCyc (v14.0) |
complete | ||
| GO:0016021 |
integral to membrane |
GOA:spkw |
IEA: Inferred from Electronic Annotation |
C |
Seeded from EcoCyc (v14.0) |
complete | ||
| GO:0016021 |
integral to membrane |
IEA: Inferred from Electronic Annotation |
SP_SL:SL-9909 |
C |
Seeded from EcoCyc (v14.0) |
complete | ||
| GO:0003674 |
molecular function |
127.0.0.1 15:06, 17 February 2015 (CST) |
ND: No biological Data available |
F |
Is notGO:0016740 (transferase activity) as suggested. PMID:8019415[4] infersGO:0004557 (alpha galactosidase activity) andGO:0008706 (phospho-beta-glucosidase activity) in abstract but did not document any evidence to support terms. Gene is compared to MalX, which is not sufficiently annotated to warrant sequence comparison as evidence. Strongly suggestGO:0008982 (protein-N(PI)-phosphohistidine-sugar phosphotransferase activity); no sequence comparison fully supports term. |
Missing: reference | ||
| GO:0008643 |
carbohydrate transport |
TAS: Traceable Author Statement |
P |
complete | ||||
| GO:0005575 |
cellular component |
127.0.0.1 15:06, 17 February 2015 (CST) |
ND: No biological Data available |
C |
Presumed function from sequence data, no data from wet experiments could be found on C subunit. Ecocyc presumes subunit B on cytoplasmic side of membrane but does not provide citation or mention C subunit localization. |
Missing: reference | ||
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Interactions See Help:Product_interactions for help entering or editing information about gene product interactions in this section of EcoliWiki.
| Partner Type | Partner | Notes | References | Evidence |
|---|---|---|---|---|
|
Protein |
Subunits of EIIBCGlv |
could be indirect |
| |
| edit table |
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Notes
Localization
See Help:Product_localization for how to add or edit information in this section of EcoliWiki.
| Compartment | Description | Evidence | Reference/Source | Notes |
|---|---|---|---|---|
|
plasma membrane |
C-terminus localized to the periplasm with 8 predicted transmembrane domains |
Daley et al. (2005) [5] |
||
|
plasma membrane |
From EcoCyc[3] |
| ||
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Notes
Structure and Physical Properties
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Physical Properties
See Help:Product_physical_properties for help entering or editing information about the physical properties of this gene product.
| Name | |
|---|---|
| Sequence |
MRTQVLLNRL KKHLFFKDVF DAVYLCSQRS TFSRKRRSLP PNEKHESDHE SHWVVMFCRS HLPILAPGLP HNQSGFLLTE LRKEDVEMLS QIQRFGGAMF TPVLLFPFAG IVVGLAILLQ NPMFVGESLT DPNSLFAQIV HIIEEGGWTV FRNMPLIFAV GLPIGLAKQA QGRACLAVMV SFLTWNYFIN AMGMTWGSYF GVDFTQDAVA GSGLTMMAGI KTLDTSIIGA IIISGIVTAL HNRLFDKKLP VFLGIFQGTS YVVIIAFLVM IPCAWLTLLG WPKVQMGIES LQAFLRSAGA LGVWVYTFLE RILIPTGLHH FIYGQFIFGP AAVEGGIQMY WAQHLQEFSL SAEPLKSLFP EGGFALHGNS KIFGAVGISL AMYFTAAPEN RVKVAGLLIP ATLTAMLVGI TEPLEFTFLF ISPLLFAVHA VLAASMSTVM YLFGVVGNMG GGLID |
| Length |
455 |
| Mol. Wt |
50.005 kDa |
| pI |
8.0 (calculated) |
| Extinction coefficient |
57,410 - 57,910 (calc based on 9 Y, 8 W, and 4 C residues) |
| edit table |
Domains/Motifs/Modification Sites
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See Help:Product_domains_motifs for help entering or editing information in this section of EcoliWiki.
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<motif_map/>
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Structure
| </protect>
Structure figures<protect> | ||||||
Notes
Gene Product Resources
See Help:Product_resources for help with entering or editing information in this section of EcoliWiki.
| Resource type | Source | Notes/Reference |
|---|---|---|
| edit table |
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Notes
Accessions in Other Databases
See Help:Gene_accessions for help with entering information into the Gene Accessions table.
| Database | Accession | Notes |
|---|---|---|
|
Escherichia coli str. K-12 substr. MG1655 | ||
|
Escherichia coli str. K-12 substr. MG1655 | ||
|
[https://asap.ahabs.wisc.edu/asap/feature_info.php?FeatureID=ABE-0012043 ASAP:ABE-0012043] |
Escherichia coli str. K-12 substr. MG1655 | |
|
Escherichia coli str. K-12 substr. MG1655 | ||
|
Escherichia coli str. K-12 substr. MG1655 | ||
|
Escherichia coli str. K-12 substr. MG1655 | ||
|
Escherichia coli str. K-12 substr. MG1655 | ||
|
Escherichia coli str. K-12 substr. MG1655 | ||
|
Escherichia coli str. K-12 substr. MG1655 | ||
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Notes
Links
| Name | URL | Comments |
|---|---|---|
| edit table |
References
See Help:References for how to manage references in EcoliWiki.
- ↑ 1.0 1.1 1.2 1.3 1.4 1.5 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
- ↑ 2.0 2.1 2.2 2.3 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ 3.0 3.1 3.2 3.3 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ 4.0 4.1 Reizer, J et al. (1994) Novel phosphotransferase system genes revealed by bacterial genome analysis: unique, putative fructose- and glucoside-specific systems. Protein Sci. 3 440-50 PubMed
- ↑ Daley, DO et al. (2005) Global topology analysis of the Escherichia coli inner membrane proteome. Science 308 1321-3 PubMed
- ↑ Finn, RD et al. (2010) The Pfam protein families database. Nucleic Acids Res. 38 D211-22 PubMed
Categories
- GO:0005351 ! carbohydrate:proton symporter activity
- GO:0005886 ! plasma membrane
- GO:0006810 ! transport
- GO:0008643 ! carbohydrate transport
- GO:0008982 ! protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
- GO:0009401 ! phosphoenolpyruvate-dependent sugar phosphotransferase system
- GO:0016020 ! membrane
- GO:0016021 ! integral component of membrane
- GO:0003674 ! molecular function
- GO:0016740 ! transferase activity
- GO:0004557 ! alpha-galactosidase activity
- GO:0008706 ! 6-phospho-beta-glucosidase activity
- GO:0005575 ! cellular component
- TMHMM Prediction
- Proteins
