glmM:Gene Product(s)

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Nomenclature Function Interactions Localization Sequence Domains Structure Resources Accessions Links References Suggestions

Nomenclature

See Help:Product_nomenclature for help entering or editing information in this section of EcoliWiki.

Standard name

GlmM

Synonyms

phosphoglucosamine mutase[1], B3176[2][1], YhbF[2][1], GlmM[2][1], MrsA[2][1] , ECK3165, JW3143, mrsA, yhbF, b3176

Product description

Phosphoglucosamine mutase; UDP-GlcNAc pathway, peptidoglycan, lipopolysaccharide synthesis; mRNA stability effects[3]

EC number (for enzymes)
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Notes

Function

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<protect> Gene Ontology
See Help:Gene_ontology for help entering or editing GO terms and GO annotations in EcoliWiki.

Qualifier GO ID GO term name Reference Evidence Code with/from Aspect Notes Status
GO:0000287

magnesium ion binding

GOA:interpro
GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR006352

F

Seeded from EcoCyc (v14.0)

complete

GO:0000287

magnesium ion binding

GOA:interpro
GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR016066

F

Seeded from EcoCyc (v14.0)

complete

GO:0000287

magnesium ion binding

GOA:spkw
SP_KW:GO_REF:0000004

IEA: Inferred from Electronic Annotation

SP_KW:KW-0460

F

Seeded from EcoCyc (v14.0)

complete

GO:0008966

phosphoglucosamine mutase activity

GOA:hamap
GO_REF:0000020

IEA: Inferred from Electronic Annotation

HAMAP:MF_01554

F

Seeded from EcoCyc (v14.0)

complete

GO:0008966

phosphoglucosamine mutase activity

GOA:interpro
GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR006352

F

Seeded from EcoCyc (v14.0)

complete

GO:0008966

phosphoglucosamine mutase activity

GOA:spec
GO_REF:0000003

IEA: Inferred from Electronic Annotation

EC:5.4.2.10

F

Seeded from EcoCyc (v14.0)

complete

GO:0046872

metal ion binding

GOA:spkw
SP_KW:GO_REF:0000004

IEA: Inferred from Electronic Annotation

SP_KW:KW-0479

F

Seeded from EcoCyc (v14.0)

complete

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Interactions See Help:Product_interactions for help entering or editing information about gene product interactions in this section of EcoliWiki.

Partner Type Partner Notes References Evidence

Protein

murC

PMID:15690043[4]

Experiment(s):EBI-888671

Protein

recA

PMID:15690043[4]

Experiment(s):EBI-888671

Protein

tufA

PMID:15690043[4]

Experiment(s):EBI-888671

Protein

nusG

PMID:15690043[4]

Experiment(s):EBI-893878

Protein

rplK

PMID:15690043[4]

Experiment(s):EBI-893878

Protein

rplL

PMID:15690043[4]

Experiment(s):EBI-893878

Protein

rplM

PMID:15690043[4]

Experiment(s):EBI-893878

Protein

rplV

PMID:15690043[4]

Experiment(s):EBI-893878

Protein

rpsB

PMID:15690043[4]

Experiment(s):EBI-893878

Protein

rpsE

PMID:15690043[4]

Experiment(s):EBI-893878

Protein

rpsJ

PMID:15690043[4]

Experiment(s):EBI-893878

Protein

mscS

PMID:15690043[4]

Experiment(s):EBI-893878

Protein

mscS

PMID:19402753[5]

LCMS(ID Probability):99.0

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Notes

Localization

See Help:Product_localization for how to add or edit information in this section of EcoliWiki.

Compartment Description Evidence Reference/Source Notes
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Notes

Structure and Physical Properties

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<protect> Physical Properties See Help:Product_physical_properties for help entering or editing information about the physical properties of this gene product.

Name
Sequence

at EcoCyc 

MSNRKYFGTD GIRGRVGDAP ITPDFVLKLG WAAGKVLARH GSRKIIIGKD TRISGYMLES
ALEAGLAAAG LSALFTGPMP TPAVAYLTRT FRAEAGIVIS ASHNPFYDNG IKFFSIDGTK
LPDAVEEAIE AEMEKEISCV DSAELGKASR IVDAAGRYIE FCKATFPNEL SLSELKIVVD
CANGATYHIA PNVLRELGAN VIAIGCEPNG VNINAEVGAT DVRALQARVL AEKADLGIAF
DGDGDRVIMV DHEGNKVDGD QIMYIIAREG LRQGQLRGGA VGTLMSNMGL ELALKQLGIP
FARAKVGDRY VLEKMQEKGW RIGAENSGHV ILLDKTTTGD GIVAGLQVLA AMARNHMSLH
DLCSGMKMFP QILVNVRYTA GSGDPLEHES VKAVTAEVEA ALGNRGRVLL RKSGTEPLIR
VMVEGEDEAQ VTEFAHRIAD AVKAV
Length

445

Mol. Wt

47.544 kDa

pI

5.9 (calculated)

Extinction coefficient

24,410 - 25,035 (calc based on 9 Y, 2 W, and 5 C residues)

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Domains/Motifs/Modification Sites

See Help:Product_domains_motifs for help entering or editing information in this section of EcoliWiki.

Type Residues Description Notes References

Initiator Methionine

1

Removed

UniProt:P31120

Modification Site

102

phosphorylation site at S102

probability greater than 75%

PMID:17938405[6]

Domain

373..443

PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain

PMID:19920124[7]

Domain

4..138

PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I

PMID:19920124[7]

Domain

156..254

PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II

PMID:19920124[7]

Domain

258..369

PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III

PMID:19920124[7]

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Structure
See Help:Product_structure for help entering or editing information in this section of EcoliWiki.

Structures

<beststructure> gene=glmM taxon=562,83333 </beststructure>

Models

View models at:

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Structure figures

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Notes

Gene Product Resources

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See Help:Product_resources for help with entering or editing information in this section of EcoliWiki.

Resource type Source Notes/Reference
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Notes

Accessions in Other Databases

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

NCBI (Protein) (EcoliWiki Page)

GI:16131066

Escherichia coli str. K-12 substr. MG1655

NCBI (Protein) (EcoliWiki Page)

GeneID:947692

Escherichia coli str. K-12 substr. MG1655

ASAP

ASAP:ABE-0010439

Escherichia coli str. K-12 substr. MG1655

UniProt (EcoliWiki Page)

UniProtKB/Swiss-Prot:P31120

Escherichia coli str. K-12 substr. MG1655

EcoCyc

EcoCyc:EG11553

Escherichia coli str. K-12 substr. MG1655

EcoGene

EcoGene:EG11553

Escherichia coli str. K-12 substr. MG1655

NCBI (Gene) (EcoliWiki Page)

GeneID:947692

Escherichia coli str. K-12 substr. MG1655

RegulonDB

RegulonDB:ECK120001506

Escherichia coli str. K-12 substr. MG1655

EchoBASE

EchoBASE:EB1514

Escherichia coli str. K-12 substr. MG1655

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Notes

Links

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References

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See Help:References for how to manage references in EcoliWiki.

  1. ↑ 1.0 1.1 1.2 1.3 1.4 1.5 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
  4. ↑ 4.00 4.01 4.02 4.03 4.04 4.05 4.06 4.07 4.08 4.09 4.10 4.11 Butland, G et al. (2005) Interaction network containing conserved and essential protein complexes in Escherichia coli. Nature 433 531-7 PubMed
  5. ↑ Hu, P et al. (2009) Global functional atlas of Escherichia coli encompassing previously uncharacterized proteins. PLoS Biol. 7 e96 PubMed
  6. ↑ Macek, B et al. (2008) Phosphoproteome analysis of E. coli reveals evolutionary conservation of bacterial Ser/Thr/Tyr phosphorylation. Mol. Cell Proteomics 7 299-307 PubMed
  7. ↑ 7.0 7.1 7.2 7.3 Finn, RD et al. (2010) The Pfam protein families database. Nucleic Acids Res. 38 D211-22 PubMed

Categories

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