Plasmid F ycbB:Gene Product(s)
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| Quickview | Gene | Gene Product(s) | Expression | Evolution | On One Page |
| Nomenclature | Function | Interactions | Localization | Sequence | Domains | Structure | Resources | Accessions | Links | References | Suggestions |
Nomenclature
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| Standard name |
ycbB |
|---|---|
| Synonyms |
ycbB, Fpla028 |
| Product description |
ycbB similar to Adhesin AidA-I precursors, ice nucleaation proteins, surface proteins, and outer membrane proteins; similar to ychA |
| EC number (for enzymes) |
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| edit table |
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Notes
Function
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Gene Ontology
See Help:Gene_ontology for help entering or editing GO terms and GO annotations in EcoliWiki.
| Qualifier | GO ID | GO term name | Reference | Evidence Code | with/from | Aspect | Notes | Status |
|---|---|---|---|---|---|---|---|---|
| edit table |
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Interactions <protect> See Help:Product_interactions for help entering or editing information about gene product interactions in this section of EcoliWiki.
| Partner Type | Partner | Notes | References | Evidence |
|---|---|---|---|---|
| edit table |
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Notes
Localization
See Help:Product_localization for how to add or edit information in this section of EcoliWiki.
| Compartment | Description | Evidence | Reference/Source | Notes |
|---|---|---|---|---|
| edit table |
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Notes
Structure and Physical Properties
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Physical Properties
See Help:Product_physical_properties for help entering or editing information about the physical properties of this gene product.
| Name | |
|---|---|
| Sequence |
MCFFLGSRLA YAENIDGSST ISNRDISGSL NIGINKDANI DINGTVNIKD YFSVATCNGQ SSTCPEGGLN ASAKIDKSAS VGASVTIVGD SSKGELNIDG GSTLYTQQLW VSGNDNDKTS NVSDDSNGSL SINNGSNVFV VSSQDDTPFK TNSVKWNQNI ISQGNNITDG TVSSGDLVLG KTGNGIIDID NNSKLDVKND VVVSTGVDGI PNEKPSEINI KNESNFSVHG DMKGGISAAG KLNLNMDNSS NLHVDKNIAV GIGRESNITV SASRESSIFS DGNFTVATGN NSNANLKLDA SNLSVNGVST IGSGDGSITK FDIKNGSVVT SSSDMTLAKG KGTQANINIS SSELNTGSLS VGEGDNADVK MTGSGASVSS KKTFTVAKGN NASATLNYTG SKIDIGSGYI GEGESAKTQL ELNNSALTAS GKVFIGQGNT TQTNLTLNDK SSVNVSGEMS VAQGSSASVD VTATNAVLSA DSLSLGGGEA AKVTMTGSGA TVSSKNTFTV AKGNNASATL DYTDSKIDIG SGYIGEGEAA KTQLELNNSA LTASGKVFIG QGNTTQTNLT LNDKSSVNVS DEMSVAQGSS ASVDVTITNA VLSADSLSLG GGEAAKVTMT GNRATISSGN TFTVAKGNNA SATLDYSDSK INIGNGYIGG GEKAQTVLTL KDSALAATGD VIMGQGQETQ TDLTLSPQSS IKVSGNMSIA QGNAASAKVI VDNADLSANS MSIGEGDTAA VTMTGNGATI SSGNTFTVAR GNNASATLDY SDSKINIGNG YIGGGEKAQT VLTLKDSALA ATGDVIMGQG QETQTDLTLS PQSSIKVSGN MSIAQGNAAS AKVIVDNADL SANSMSIGEG DTAAVTMTGN GATISSGNTF TVARGNNASA TLDYSDSKIN IGNGYIGVGE KSHTLLKLDN STFHAAGNID IGKGSSTIAN VSVGAGSNMS IKGNASIGVG DQAKAKFSVK DSVLNIGSSL VLGQGNSTEA EMSVEHSQLY SGGLLLGTAN NAVVSMSANN SEISVVGDYT VAKGDGSEAT LIYKNSDINL GNGILGAGSG VKTDLSLDNS KFVASDGIII GKGDNAITNL SISDHSVFKG ERINIGNGSY SKNSISITGN SIFDFGSSQE STIGEGDYSQ SLVTINDASV YGDGSLTLAK GNNSFAVLNL QDNAVTNANN ISLATGLGSK AIVNVSNMNS GQFNPVSMGA GDGYAEVNFD GVNGYTLSTN FICMDSGSCA DTVINVNRGT VSLSGTNDWK GQINVYDGTR LDARGNDAVD GILNVSKEAQ VDFNGYSQHM TGIDNKGMIY LSDGSASSDV YLDKDYVAHD GSGVQFGIFG QKEADVMHVK GDTSGSSGIV VTTNSKNKIK KGGDILLVEV NGDSSGSFYL NSLIKNGKEY KVTGDYIDVG AWEYALNKKR KNWYLSVDMR PEPGAFINNS KSMLDMFALQ RYDIPGQHRY PTLFENLYNN GMWIQFNNNS GSNSEVYDNL KTSYSLNTMM IGGDIYNWTD GYNYSHIGIM GGMGSAANKT TSTNNKRATG NVDGYTLGLY HVFQQNISDG LNESERQGLW TYSSIQYMDY DNSVSSTNNF KANYGVNGFR LTGEVGYLKN IGGIQPSDFY VEPKLYLSHT ELSGGVVEDL QGGKITYPNS LTIIEPGVFF SYRKTHESTS NDEAMFKDYI KQSVVDAWFG GGYSFKTGNY SRTNFDSDMV EYNTSDNFAL KSGVEFEFLK DARLLLTSSY SINNDRNLSF ILGGNYYF |
| Length |
1,758 |
| Mol. Wt |
182.634 kDa |
| pI |
4.5 (calculated) |
| Extinction coefficient |
134,430 - 135,055 (calc based on 57 Y, 9 W, and 5 C residues) |
| edit table |
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Domains/Motifs/Modification Sites
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<motif_map/> |
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Structure
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Structure figures<protect> | ||||||
Notes
Gene Product Resources
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| Resource type | Source | Notes/Reference |
|---|---|---|
| edit table |
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Notes
Accessions in Other Databases
See Help:Gene_accessions for help with entering information into the Gene Accessions table.
| Database | Accession | Notes |
|---|---|---|
|
EcoCyc: |
Escherichia coli str. K-12 substr. MG1655 | |
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EcoGene: |
Escherichia coli str. K-12 substr. MG1655 | |
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RegulonDB: |
Escherichia coli str. K-12 substr. MG1655 | |
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EchoBASE: |
Escherichia coli str. K-12 substr. MG1655 | |
|
ASAP: |
Escherichia coli str. K-12 substr. MG1655 | |
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Notes
Links
| Name | URL | Comments |
|---|---|---|
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References
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