Plasmid F traU:Gene Product(s)

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Nomenclature Function Interactions Localization Sequence Domains Structure Resources Accessions Links References Suggestions

Nomenclature

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Standard name

traU

Synonyms

traU, Fpla089

Product description

traU

required for F pilus assembly; periplasmic protein

EC number (for enzymes)


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Notes

Function

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<protect> Gene Ontology See Help:Gene_ontology for help entering or editing GO terms and GO annotations in EcoliWiki.

Qualifier GO ID GO term name Reference Evidence Code with/from Aspect Notes Status
GO:0009279

cell outer membrane

PMID:20081027[1]

IDA: Inferred from Direct Assay

C

complete

GO:0009291

unidirectional conjugation

PMID:20081027[1]

IMP: Inferred from Mutant Phenotype

P

complete

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Interactions <protect> See Help:Product_interactions for help entering or editing information about gene product interactions in this section of EcoliWiki.

Partner Type Partner Notes References Evidence
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Notes

Localization

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Compartment Description Evidence Reference/Source Notes
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Notes

Structure and Physical Properties

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<protect> Physical Properties See Help:Product_physical_properties for help entering or editing information about the physical properties of this gene product.

Name
Sequence 
MKRRLWLLML FLFAGHVPAA SADSACEGRF VNPITDICWS CIFPLSLGSI KVSQGKVPDT
ANPSMPIQIC PAPPPLFRRI GLAIGYWEPM ALTDVTRSPG CMVNLGFSLP AFGKTAQGTA
KKDEKQVNGA FYHVHWYKYP LTYWLNIITS LGCLEGGDMD IAYLSEIDPT WTDSSLTTIL
NPEAVIFANP IAQGACAADA IASAFNMPLD VLFWCAGSQG SMYPFNGWVS NESSPLQSSL
LVSERMAFKL HRQGMIMETI GKNNAVCNEY PSPILPKERW RYQMVNMYPD SGQCHPFGRS
VTRWETGKNP PNTKKNFGYL MWRKRNCVFL
Length

330

Mol. Wt

36.787 kDa

pI

8.4 (calculated)

Extinction coefficient

76,890 - 78,265 (calc based on 11 Y, 11 W, and 11 C residues)

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Domains/Motifs/Modification Sites

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Type Residues Description Notes References

motif

1-22

UniProt Manual:Signal Peptides

UniProt:P18471


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<motif_map/>

Structure
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Structures

<beststructure> gene=Plasmid_F_traU taxon=2465 </beststructure>

Models

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</protect>

Structure figures

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Notes

Gene Product Resources

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See Help:Product_resources for help with entering or editing information in this section of EcoliWiki.

Resource type Source Notes/Reference
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Notes

Accessions in Other Databases

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

EcoCyc

EcoCyc:

Escherichia coli str. K-12 substr. MG1655

EcoGene

EcoGene:

Escherichia coli str. K-12 substr. MG1655

RegulonDB

RegulonDB:

Escherichia coli str. K-12 substr. MG1655

EchoBASE

EchoBASE:

Escherichia coli str. K-12 substr. MG1655

ASAP

ASAP:

Escherichia coli str. K-12 substr. MG1655

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Notes

Links

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References

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  1. ↑ 1.0 1.1 Arutyunov, D et al. (2010) F plasmid TraF and TraH are components of an outer membrane complex involved in conjugation. J. Bacteriol. 192 1730-4 PubMed

Categories

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