Phage P1 sit:Gene Product(s)

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Nomenclature Function Interactions Localization Sequence Domains Structure Resources Accessions Links References Suggestions

Nomenclature

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Standard name

Sit

Synonyms

gp037

Product description

putative structural injection transglycosylase; putative tail ruler; product 99 pct identical to predicted product of orf47 of P1 PID:g2661100; region of aa 467..882 similar to region of aa 1141..1545 of putative transglycosylase of B. subtilis bacteriophage SPBc2 PID:g2634555 and bacterial lytic transglycosylases;

EC number (for enzymes)


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Notes

Function

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<protect> Gene Ontology <protect> See Help:Gene_ontology for help entering or editing GO terms and GO annotations in EcoliWiki.

Qualifier GO ID GO term name Reference Evidence Code with/from Aspect Notes Status
GO:0098015

virus tail

PMID:15489417[1]

IDA: Inferred from Direct Assay

C

7057-7058

complete

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Interactions <protect> See Help:Product_interactions for help entering or editing information about gene product interactions in this section of EcoliWiki.

Partner Type Partner Notes References Evidence
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Notes

Localization

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Compartment Description Evidence Reference/Source Notes
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Notes

Structure and Physical Properties

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<protect> Physical Properties <protect> See Help:Product_physical_properties for help entering or editing information about the physical properties of this gene product.

Name
Sequence 
MERKNANIDD VIRTVETASA KELEELAGIR EAVEDLKGGR VATVYPVSRS VSALNRTIEN
SRPDFVANAP SVDPIVEAMK RLNLGDVSRV VQEDVAQQEQ RAKSTTPKGK KRRRKAIPED
VKAQRTEAAE HAREMFGQKG GAQKSQNQRD ARGRFIGKSG SKAAAEDARA ERAEKARRKE
DDERLNAESG LLKKLSKVAE GIGNPSETRA VDALGYAVAG PLWAAGKELG GISKEVGGSL
NGARKSIADV IRGNDDNSRR KGFFRRKSQN SADVVQVNTQ KRTVQELQEQ TSEIKEGNDK
ILSALDQIAK NTGKKKGGLL SKLFSLLGKG AGGVASLLMG RGMLKKAGAL AFGALGAKKL
VGMLRGGGKK TLAHEGGDLV ARAAGKLGLK AVGKGALRAI PLVGTVAGGI YDAVTGWNDT
EAQRRAFGLK SGQDPSFQQK SAYTLANILD MGGLVSGISS AIGEVLKSLG FEDIGNMLQS
FSTESIAQAI DSGITNLETY ISNLGDTIST KFDDYTAKIG DAVSAWFSDT SNKLLEKLDA
IKDFFTVDNL KQVFSDAIDS AIDFIQNPGK HIKEAAGNIW DGVKNLPGKA LDAAVDAVKN
TPAAMIVSKI PNPIGEANAK EITPELKAPV NSHQETSDSK TESDAKQSNI ATRVINAALD
TAKDSNKTVK QTANQIINAN AVETGNSALQ KIDKAIGQNS LSSSSLNTTG TRNDIQKAAD
TYNNGNLDVK VGSLGAEGKA NLDKLAPYFA ELENKYGLPE GTLYAIAATE SGGNPNAKST
LTRSPNGKLS GGALGMFQFT SVAREETGLS REDSFNPEKS AEAAALLMSK YLKQANGDLN
EAITAYNAGF GTINKWKKGT GDLSKENREY AIKVNTHRAR YLGGEIYTPG AGAQGGAQYG
VRGPLPDNAV IDQSTGLAFT PGDSPFEKGG LVDKIGNAVG VNDLVNKFMN GRGMRREVVQ
GTLEERARGK GTATAAGNVY VDTPMPAEEA RPVANNSSYF DQLGAQMGID GLYDKLINAR
GMRSNNSPQP ASTSQVTTAA NDLQQPTGRM QIDGQVISDL GGSGAKPTMQ LADNTVSLDG
ETKRLFAQMT SLLARIEEHT KDSAKGQGTV VKVSTPQPGV MRTVPLSIDD PLMNDYARVD
Length

1,140

Mol. Wt

120.743 kDa

pI

9.5 (calculated)

Extinction coefficient

57,300 (calc based on 20 Y, 5 W, and 0 C residues)

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Domains/Motifs/Modification Sites

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Type Residues Description Notes References
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Structure
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Structures

<beststructure> gene=Phage_P1_sit taxon=10678 </beststructure>

Models

View models at:

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Structure figures

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Notes

Gene Product Resources

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<protect> See Help:Product_resources for help with entering or editing information in this section of EcoliWiki.

Resource type Source Notes/Reference
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Notes

Accessions in Other Databases

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<protect> See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes
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Notes

Links

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References

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See Help:References for how to manage references in EcoliWiki.

  1. ↑ Łobocka, MB et al. (2004) Genome of bacteriophage P1. J. Bacteriol. 186 7032-68 PubMed

Categories

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