Phage lambda cI:Gene Product(s)

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Gene

Gene Product(s)

Expression

Evolution

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Nomenclature

Function

Interactions

Localization

Sequence

Domains

Structure

Resources

Accessions

Links

References

Suggestions

Nomenclature

Standard name	cI
Synonyms	cI, lambdap88
Product description	repressor
EC number (for enzymes)
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Function

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Gene Ontology

Qualifier	GO ID	GO term name	Reference(s)	Evidence Code	with/from	Aspect	Notes	Status
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Interactions

Localization

Compartment	Description	Evidence	Notes
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Structure and Physical Properties

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Physical Properties

Sequence	MSTKKKPLTQ EQLEDARRLK AIYEKKKNEL GLSQESVADK MGMGQSGVGA LFNGINALNA YNAALLAKIL KVSVEEFSPS IAREIYEMYE AVSMQPSLRS EYEYPVFSHV QAGMFSPELR TFTKGDAERW VSTTKKASDS AFWLEVEGNS MTAPTGSKPS FPDGMLILVD PEQAVEPGDF CIARLGGDEF TFKKLIRDSG QVFLQPLNPQ YPMIPCNESC SVVGKVIASQ WPEETFG
Mol. Wt	26.21 kDa (calc)
pI
Extinction coefficient
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Domains/Motifs/Modification Sites

Type	Residues	Description	Notes
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Structure

See Help:Jmol in EcoliWiki Lambda repressor N-terminal domain/operator cocrystal PDB:1LMB <jmol> <jmolApplet> <color>white</color> <name>1LMB</name> <uploadedFileContents >1LMB.pdb</uploadedFileContents> <script> wireframe off; spacefill off; trace off; spacefill on; rotate ON; color chain; hide water; select *:1, *:2; color cpk; </script> </jmolApplet> </jmol> <jmol> <jmolCheckbox > <scriptWhenChecked > rotate on; </scriptWhenChecked > <scriptWhenUnchecked > rotate off; </scriptWhenUnchecked > <checked>true</checked> <text>rotate</text> </jmolCheckbox > <jmolCheckbox> <scriptWhenChecked > hide none; hide hoh; </scriptWhenChecked > <scriptWhenUnchecked > hide *:1,*:2; </scriptWhenUnchecked > <checked>true</checked> <text>DNA</text> </jmolCheckbox > <jmolCheckbox > <scriptWhenChecked > hide none; hide hoh; </scriptWhenChecked > <scriptWhenUnchecked > hide *:3, *:4; </scriptWhenUnchecked > <checked>true</checked> <text>Protein</text> </jmolCheckbox > <jmolButton><script>reset; wireframe off; spacefill off; trace off; hide water; spacefill on; rotate ON; color chain; select *:1, *:2; color cpk; </script><text>reset</text></jmolButton> </jmol>

Coming soon... A new Structure table. We are currently working on reformatting the table to provide more information and references to structures and computational models. We would love to add your research here! If you are interested in adding your data, contact Daniel. You can find our [Blast results here].

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Structures	X-ray	X-ray
Models	lambda
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Notes

The structure of the N-terminal domain of lambda repressor in a cocrystal with operator DNA was described by Beamer and Pabo. DNA recognition is via a helix-turn-helix DNA binding motif Phage lambda cI:Gene Product(s)/highlight hththat contacts operator DNA in the major groove. Additonal contacts are made by an N-terminal arm <jmol> <jmolLink> <target>1LMB</target> <script> select 1-6:3, 1-6:4; color yellow; </script> <text>(highlight arm)</text> </jmolLink> </jmol>that reaches around the DNA.

Gene Product Resources

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Resource type	Source	Notes/Reference
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Accessions in Other Databases

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Database	Accession	Notes
Genbank (EcoliWiki Page)	Genbank:NP_040628.1
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Links

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Name	URL	Comments
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References

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Categories

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