alsE:Gene Product(s)
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| Quickview | Gene | Gene Product(s) | Expression | Evolution | On One Page |
| Nomenclature | Function | Interactions | Localization | Sequence | Domains | Structure | Resources | Accessions | Links | References | Suggestions |
Nomenclature
See Help:Product_nomenclature for help entering or editing information in this section of EcoliWiki.
| Standard name |
AlsE product |
|---|---|
| Synonyms |
allulose-6-phosphate 3-epimerase product[1], B4085 product[2][1], YjcU product[2][1], AlsE product[2][1] |
| Product description |
Allulose-6-P 3-epimerase[4] |
| EC number (for enzymes) |
|
| edit table |
Notes
Function
Gene Ontology
See Help:Gene_ontology for help entering or editing GO terms and GO annotations in EcoliWiki.
| Qualifier | GO ID | GO term name | Reference(s) | Evidence Code | with/from | Aspect | Notes | Status |
|---|---|---|---|---|---|---|---|---|
| GO:0004750 |
ribulose-phosphate 3-epimerase activity |
IEA: Inferred from Electronic Annotation |
F |
Seeded from EcoCyc [5] |
complete | |||
| GO:0005975 |
carbohydrate metabolic process |
IEA: Inferred from Electronic Annotation |
P |
Seeded from EcoCyc [5] |
complete | |||
| GO:0003824 |
catalytic activity |
IEA: Inferred from Electronic Annotation |
F |
Seeded from EcoCyc [5] |
complete | |||
| GO:0008152 |
metabolic process |
IEA: Inferred from Electronic Annotation |
P |
Seeded from EcoCyc [5] |
complete | |||
| GO:0016853 |
isomerase activity |
IEA: Inferred from Electronic Annotation |
F |
Seeded from EcoCyc [5] |
complete | |||
| GO:0005515 |
protein binding |
IPI: Inferred from Physical Interaction |
F |
Seeded from EcoCyc [5] |
complete | |||
| GO:0016857 |
racemase and epimerase activity, acting on carbohydrates and derivatives |
IDA: Inferred from Direct Assay |
F |
Seeded from EcoCyc 12.5 [8] |
complete | |||
| GO:0019316 |
D-allose catabolic process |
IMP: Inferred from Mutant Phenotype |
P |
Seeded from EcoCyc [5] |
complete | |||
| GO:0034700 |
allulose 6-phosphate 3-epimerase activity |
IDA: Inferred from Direct Assay |
F |
Seeded from EcoCyc [5] |
complete | |||
| GO:0019316 |
D-allose catabolic process |
IMP: Inferred from Mutant Phenotype |
P |
alsE insertion mutants can't grow on D-allose as the sole carbon source. |
complete | |||
| edit table |
Interactions See Help:Product_interactions for help entering or editing information about gene product interactions in this section of EcoliWiki.
| Partner Type | Partner | Notes | References | Evidence |
|---|---|---|---|---|
|
Protein |
ahpF |
Experiment(s):EBI-1147423 | ||
| edit table |
Notes
Localization
See Help:Product_localization for how to add or edit information in this section of EcoliWiki.
| Compartment | Description | Evidence | Notes |
|---|---|---|---|
| edit table |
Notes
Structure and Physical Properties
Physical Properties See Help:Product_physical_properties for help entering or editing information about the physical properties of this gene product.
| Sequence |
MKISPSLMCM DLLKFKEQIE FIDSHADYFH IDIMDGHFVP NLTLSPFFVS QVKKLATKPL DCHLMVTRPQ DYIAQLARAG ADFITLHPET INGQAFRLID EIRRHDMKVG LILNPETPVE AMKYYIHKAD KITVMTVDPG FAGQPFIPEM LDKLAELKAW REREGLEYEI EVDGSCNQAT YEKLMAAGAD VFIVGTSGLF NHAENIDEAW RIMTAQILAA KSEVQPHAKT A |
|---|---|
| Mol. Wt |
26.11 kDa (calc) [2] |
| pI | |
| Extinction coefficient |
19940 - 20315 (calc based on 6 Y, 2 W, and 3 C residues) |
| edit table |
Domains/Motifs/Modification Sites
See Help:Product_domains_motifs for help entering or editing information in this section of EcoliWiki.
| Type | Residues | Description | Notes |
|---|---|---|---|
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Structure
See Help:Product_structure for help entering or editing information in this section of EcoliWiki.
| Structures |
<beststructure>alsE 562</beststructure> |
|---|---|
| Models |
View models at: |
| edit table |
Notes
Gene Product Resources
See Help:Product_resources for help with entering or editing information in this section of EcoliWiki.
| Resource type | Source | Notes/Reference |
|---|---|---|
| edit table |
Notes
Accessions in Other Databases
See Help:Gene_accessions for help with entering information into the Gene Accessions table.
| Database | Accession | Notes |
|---|---|---|
|
| ||
| edit table |
Notes
Links
| Name | URL | Comments |
|---|---|---|
| edit table |
References
- ↑ 1.0 1.1 1.2 1.3 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
- ↑ 2.0 2.1 2.2 2.3 2.4 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
- ↑ 5.0 5.1 5.2 5.3 5.4 5.5 5.6 5.7 EcoCyc (release 13.0; 2009) Keseler, IM et al. (2009) Nucleic Acids Res. 37(Database issue):D464-70
- ↑ 6.0 6.1 Arifuzzaman, M et al. (2006) Large-scale identification of protein-protein interaction of Escherichia coli K-12. Genome Res. 16 686-91 PubMed
- ↑ 7.0 7.1 Chan, KK et al. (2008) Structural basis for substrate specificity in phosphate binding (beta/alpha)8-barrels: D-allulose 6-phosphate 3-epimerase from Escherichia coli K-12. Biochemistry 47 9608-17 PubMed
- ↑ EcoCyc (release 12.5; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ 9.0 9.1 Poulsen, TS et al. (1999) D-Allose catabolism of Escherichia coli: involvement of alsI and regulation of als regulon expression by allose and ribose. J. Bacteriol. 181 7126-30 PubMed
Categories
- GO:0004750 ! ribulose-phosphate 3-epimerase activity
- GO:0005975 ! carbohydrate metabolic process
- GO:0003824 ! catalytic activity
- GO:0008152 ! metabolic process
- GO:0016853 ! isomerase activity
- GO:0005515 ! protein binding
- GO:0016857 ! racemase and epimerase activity, acting on carbohydrates and derivatives
- GO:0019316 ! D-allose catabolic process
- GO:0034700 ! allulose 6-phosphate 3-epimerase activity
- Proteins