arnA:Gene

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Nomenclature Location(s) and DNA Sequence Alleles and Phenotypes Genetic Resources Accessions Links References Suggestions

Nomenclature

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Standard name

arnA

Mnemonic
Synonyms

yfbG, ECK2248, b2255, JW2249, pmrI, SAF[1][2]

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Notes

Location(s) and DNA Sequence

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Strain Map location Genome coordinates Genome browsers Sequence links

MG1655

51 minutes 

MG1655: 2366061..2368043
gbrowse_img.php?coord=2365061..2369043&genome=ecoli&name=MG1655&trackset=0&width=300&.png

W3110

 

W3110: 2372709..2374691
gbrowse_img.php?coord=2371709..2375691&genome=ecoli_W3110&name=W3110&trackset=0&width=300&.png

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Notes

Sequence Features

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Feature type Location Description
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Notes

Alleles and Phenotypes

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Allele Nt change(s) AA change(s) Phenotype: Type Phenotype: Description Reference Availability Comments

ΔarnA (Keio:)

deletion

deletion

PMID:16738554[3]

Shigen

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Notes

Genetic Resources

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Resource Resource Type Source Notes/Reference

Plasmid clone

Shigen

PMID:16769691[4]

Status:

Primer 1:

Primer 2:

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Notes

Accessions in Other Databases

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Database Accession Notes

EcoCyc (EcoliWiki Page)

EcoCyc:G7168

EchoBASE (EcoliWiki Page)

EchoBASE:EB3844

EcoliGenExpDB (EcoliWiki Page)

EcoliGenExpDB:b2255

ECOL199310CYC (EcoliWiki Page)

ECOL199310CYC:C2797

EcoGene (EcoliWiki Page)

EcoGene:EG14091

ECOO157CYC (EcoliWiki Page)

ECOO157CYC:Z3513

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Notes

Links

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Name URL Comments
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References

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  1. ↑ Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ Baba, T et al. (2006) Construction of Escherichia coli K-12 in-frame, single-gene knockout mutants: the Keio collection. Mol. Syst. Biol. 2 2006.0008 PubMed
  4. ↑ Kitagawa, M et al. (2005) Complete set of ORF clones of Escherichia coli ASKA library (a complete set of E. coli K-12 ORF archive): unique resources for biological research. DNA Res. 12 291-9 PubMed


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