Cis Element:DARS1: Difference between revisions

From EcoliWiki
Jump to navigation Jump to search
← Older editNewer edit →
Update TableEdit tables.
Line 8: Line 8:
*  
*  
****************************************************************************************** -->
****************************************************************************************** -->
{|border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;"  
{| id="P4a75b90ce631f" class=" tableEdit Cis_element_summary_table"


|-
|-
!align=left {{table_heading_style}} |Standard Name
!align=left |Standard Name
||
||
DARS1
DARS1
|-
|-
!align=left {{table_heading_style}} |Synonyms
!align=left |Synonyms
||
||


|-
|-
!align=left {{table_heading_style}} |Function
!align=left |Function
||
||
DnaA reactivation sequence
DnaA reactivation sequence
|-
|-
!align=left {{table_heading_style}} |Location
!align=left |Location
||
||


|-
|-
!align=left {{table_heading_style}} |SO terms
!align=left |SO terms
||
||




|-class='sortbottom'
|- class="tableEdit_footer"
|[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=63ce1649aab8b3180235b0af7618f667.165039.P4a75b90ce631f&page=165039&pagename={{FULLPAGENAMEE}}&type=1&template=Cis_element_summary_table edit table] ||
|<span class="tableEdit_editLink plainlinks">[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=63ce1649aab8b3180235b0af7618f667.165039.P4a75b90ce631f&page=165039&pagename={{FULLPAGENAMEE}}&type=1&template=Cis_element_summary_table edit table]</span> ||
|}
|}
<!--box uid=63ce1649aab8b3180235b0af7618f667.165039.P4a75b90ce631f--></protect>
<!--box uid=63ce1649aab8b3180235b0af7618f667.165039.P4a75b90ce631f--></protect>
Line 47: Line 47:
*  
*  
****************************************************************************************** -->{{Gene_location_help}}
****************************************************************************************** -->{{Gene_location_help}}
{|class = 'sortable' border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;"   
{|   id="V4a75b90d033c6" class=" tableEdit Gene_location_table"   
|- {{table_heading_style}}
|-
!|Strain!!Map location!!Genome coordinates!!Genome browsers!!Sequence links
!|Strain!!Map location!!Genome coordinates!!Genome browsers!!Sequence links


|-class='sortbottom'
|- class="tableEdit_footer"
|[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=63ce1649aab8b3180235b0af7618f667.165039.V4a75b90d033c6&page=165039&pagename={{FULLPAGENAMEE}}&type=0&template=Gene_location_table edit table] || || || ||
|<span class="tableEdit_editLink plainlinks">[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=63ce1649aab8b3180235b0af7618f667.165039.V4a75b90d033c6&page=165039&pagename={{FULLPAGENAMEE}}&type=0&template=Gene_location_table edit table]</span> || || || ||
|}
|}
<!--box uid=63ce1649aab8b3180235b0af7618f667.165039.V4a75b90d033c6--></protect>
<!--box uid=63ce1649aab8b3180235b0af7618f667.165039.V4a75b90d033c6--></protect>
Line 67: Line 67:
*  
*  
****************************************************************************************** -->{{Product_interactions_help}}
****************************************************************************************** -->{{Product_interactions_help}}
{|class = 'sortable' border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;"   
{|   id="V4a75b90d055ba" class=" tableEdit Product_interactions_table"   
|- {{table heading style}}
|-
!|Partner Type!!Partner!!Notes!!References!!Evidence
!|Partner Type!!Partner!!Notes!!References!!Evidence


|-class='sortbottom'
|- class="tableEdit_footer"
|[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=63ce1649aab8b3180235b0af7618f667.165039.V4a75b90d055ba&page=165039&pagename={{FULLPAGENAMEE}}&type=0&template=Product_interactions_table edit table] || || || ||
|<span class="tableEdit_editLink plainlinks">[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=63ce1649aab8b3180235b0af7618f667.165039.V4a75b90d055ba&page=165039&pagename={{FULLPAGENAMEE}}&type=0&template=Product_interactions_table edit table]</span> || || || ||
|}
|}
<!--box uid=63ce1649aab8b3180235b0af7618f667.165039.V4a75b90d055ba--></protect>
<!--box uid=63ce1649aab8b3180235b0af7618f667.165039.V4a75b90d055ba--></protect>
Line 87: Line 87:
*  
*  
****************************************************************************************** -->
****************************************************************************************** -->
{|class = 'sortable' border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;"   
{|   id="H4a75b90d06911" class=" tableEdit Cis_Element_allele_table"   
|- {{table_heading_style}}
|-
!|Allele!!Nt change(s)!!Phenotype: Type!!Phenotype: Description!!Reference!!Availability!!Comments
!|Allele!!Nt change(s)!!Phenotype: Type!!Phenotype: Description!!Reference!!Availability!!Comments


|-class='sortbottom'
|- class="tableEdit_footer"
|[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=63ce1649aab8b3180235b0af7618f667.165039.H4a75b90d06911&page=165039&pagename={{FULLPAGENAMEE}}&type=0&template=Cis_Element_allele_table edit table] || || || || || ||
|<span class="tableEdit_editLink plainlinks">[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=63ce1649aab8b3180235b0af7618f667.165039.H4a75b90d06911&page=165039&pagename={{FULLPAGENAMEE}}&type=0&template=Cis_Element_allele_table edit table]</span> || || || || || ||
|}
|}
<!--box uid=63ce1649aab8b3180235b0af7618f667.165039.H4a75b90d06911--></protect>
<!--box uid=63ce1649aab8b3180235b0af7618f667.165039.H4a75b90d06911--></protect>
Line 107: Line 107:
*  
*  
****************************************************************************************** -->{{Gene_resources_help}}
****************************************************************************************** -->{{Gene_resources_help}}
{|class = 'sortable' border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;"   
{|   id="Z4a75b90d07c00" class=" tableEdit Gene_resource_table"   
|- {{table_heading_style}}
|-
!|Resource!!Resource Type!!Source!!Notes/Reference
!|Resource!!Resource Type!!Source!!Notes/Reference


|-class='sortbottom'
|- class="tableEdit_footer"
|[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=63ce1649aab8b3180235b0af7618f667.165039.Z4a75b90d07c00&page=165039&pagename={{FULLPAGENAMEE}}&type=0&template=Gene_resource_table edit table] || || ||
|<span class="tableEdit_editLink plainlinks">[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=63ce1649aab8b3180235b0af7618f667.165039.Z4a75b90d07c00&page=165039&pagename={{FULLPAGENAMEE}}&type=0&template=Gene_resource_table edit table]</span> || || ||
|}
|}
<!--box uid=63ce1649aab8b3180235b0af7618f667.165039.Z4a75b90d07c00--></protect>  
<!--box uid=63ce1649aab8b3180235b0af7618f667.165039.Z4a75b90d07c00--></protect>  
Line 126: Line 126:
*  
*  
****************************************************************************************** -->{{Gene_accessions_help}}
****************************************************************************************** -->{{Gene_accessions_help}}
{|class = 'sortable' border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;"   
{|   id="D4a75b90d08fa8" class=" tableEdit Gene_accessions_table"   
|- {{table_heading_style}}
|-
!|Database!!Accession!!Notes
!|Database!!Accession!!Notes


|-class='sortbottom'
|- class="tableEdit_footer"
|[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=63ce1649aab8b3180235b0af7618f667.165039.D4a75b90d08fa8&page=165039&pagename={{FULLPAGENAMEE}}&type=0&template=Gene_accessions_table edit table] || ||
|<span class="tableEdit_editLink plainlinks">[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=63ce1649aab8b3180235b0af7618f667.165039.D4a75b90d08fa8&page=165039&pagename={{FULLPAGENAMEE}}&type=0&template=Gene_accessions_table edit table]</span> || ||
|}
|}
<!--box uid=63ce1649aab8b3180235b0af7618f667.165039.D4a75b90d08fa8--></protect>
<!--box uid=63ce1649aab8b3180235b0af7618f667.165039.D4a75b90d08fa8--></protect>

Revision as of 00:21, 9 January 2010

Cis element summary table

Standard Name

DARS1

Synonyms
Function

DnaA reactivation sequence

Location
SO terms


edit table

Notes

DARS = DnaA reactivating sequences[1]. DARS elements contain clusters of DnaA binding sites. Binding to DARS sites promotes nucleotide exchange, releasing ADP and allowing DnaA to bind ATP.


Location and Sequence

[back to top]


See Help:Gene_location for help entering information in the Gene Location and DNA sequence table.

Strain Map location Genome coordinates Genome browsers Sequence links
edit table


Notes

Interactions

[back to top]


See Help:Product_interactions for help entering or editing information about gene product interactions in this section of EcoliWiki.

Partner Type Partner Notes References Evidence
edit table


Notes

Mutant alleles and phenotypes

[back to top]


Allele Nt change(s) Phenotype: Type Phenotype: Description Reference Availability Comments
edit table


Notes

Genetic Resources

[back to top]


See Help:Gene_resources for help entering information into the Genetic Resources table.

Resource Resource Type Source Notes/Reference
edit table

Notes

Accessions

[back to top]


See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes
edit table


Notes

References

[back to top]


See Help:References for how to manage references in EcoliWiki.

  1. ↑ Fujimitsu, K et al. (2009) Specific genomic sequences of E. coli promote replicational initiation by directly reactivating ADP-DnaA. Genes Dev. 23 1221-33 PubMed

Categories

Retrieved from "https://ecoliwiki.org/colipedia/index.php?title=Cis_Element:DARS1&oldid=974878"