Cis Element:Phage lambda attP: Difference between revisions
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Revision as of 21:11, 23 June 2009
Cis element summary table
| Standard Name |
lambda attP |
|---|---|
| Synonyms | |
| Function |
phage attachment site |
| Location |
approximately nt 27 571 - 27 813 (PMID:6246439[1]) attP core sequence located at nt 27 721 - 27 735 (PMID:6246439[1]) |
| SO terms |
|
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Notes
In the free phage, the att site is referred to as attP (phage attachment site) while the corresponding site in a host genome is called attB (bacterial attachment site). After integration occurs to create a prophage, these sites are then known as attL (left end of prophage) and attR (right end of prophage). Reviewed in Lambda II.[2]
Location and Sequence
See Help:Gene_location for help entering information in the Gene Location and DNA sequence table.
| Strain | Map location | Genome coordinates | Genome browsers | Sequence links |
|---|---|---|---|---|
|
Phage Lambda (NC_001416) |
NC_001416: 27718..27746 |
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Notes
Interactions
See Help:Product_interactions for help entering or editing information about gene product interactions in this section of EcoliWiki.
| Partner Type | Partner | Notes | References | Evidence |
|---|---|---|---|---|
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Notes
Mutant alleles and phenotypes
| Allele | Nt change(s) | Phenotype: Type | Phenotype: Description | Reference | Availability | Comments |
|---|---|---|---|---|---|---|
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Notes
Genetic Resources
See Help:Gene_resources for help entering information into the Genetic Resources table.
| Resource | Resource Type | Source | Notes/Reference |
|---|---|---|---|
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Notes
Accessions
See Help:Gene_accessions for help with entering information into the Gene Accessions table.
| Database | Accession | Notes |
|---|---|---|
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Notes
References
See Help:References for how to manage references in EcoliWiki.
- ↑ 1.0 1.1 Hsu, PL et al. (1980) The lambda phage att site: functional limits and interaction with Int protein. Nature 285 85-91 PubMed
- ↑ Lambda II Monograph 13. Edited by ROGER W. HENDRIX, JEFFREY W. ROBERTS,FRANKLIN W. STAHL and ROBERT A. WEISBERG. Cold Spring Harbor Laboratory, Cold Spring Harbor, NY 11724. 1983