Cis Element:Phage lambda attP: Difference between revisions

From EcoliWiki
Jump to navigation Jump to search
← Older editNewer edit →
Table edited by Bmcintosh via TableEdit
Line 38: Line 38:
<!--box uid=63ce1649aab8b3180235b0af7618f667.164833.U4a413ab9aedf9--></protect>
<!--box uid=63ce1649aab8b3180235b0af7618f667.164833.U4a413ab9aedf9--></protect>
===Notes===
===Notes===
In the free phage, the ''att'' site is referred to as ''attP'' (<u>p</u>hage <u>att</u>achment site) while the corresponding site in a host genome is called ''attB'' (<u>b</u>acterial <u>att</u>achment site).  After integration occurs to create a prophage, these sites are then known as ''attL'' (<u>l</u>eft end of prophage) and ''attR'' (<u>r</u>ight end of prophage).
In the free phage, the ''att'' site is referred to as ''attP'' (<u>p</u>hage <u>att</u>achment site) while the corresponding site in a host genome is called ''attB'' (<u>b</u>acterial <u>att</u>achment site).  After integration occurs to create a prophage, these sites are then known as ''attL'' (<u>l</u>eft end of prophage) and ''attR'' (<u>r</u>ight end of prophage). Reviewed in <u>Lambda II Monograph 13</u>. Edited by ROGER W. HENDRIX, JEFFREY W. ROBERTS,FRANKLIN W. STAHL and ROBERT A. WEISBERG. Cold Spring Harbor Laboratory, Cold Spring Harbor, NY 11724. 1983


== Location and Sequence ==
== Location and Sequence ==

Revision as of 21:09, 23 June 2009

Cis element summary table

Standard Name

lambda attP

Synonyms
Function

phage attachment site

Location

approximately nt 27 571 - 27 813 (PMID:6246439[1])

attP core sequence located at nt 27 721 - 27 735 (PMID:6246439[1])

SO terms


edit table

Notes

In the free phage, the att site is referred to as attP (phage attachment site) while the corresponding site in a host genome is called attB (bacterial attachment site). After integration occurs to create a prophage, these sites are then known as attL (left end of prophage) and attR (right end of prophage). Reviewed in Lambda II Monograph 13. Edited by ROGER W. HENDRIX, JEFFREY W. ROBERTS,FRANKLIN W. STAHL and ROBERT A. WEISBERG. Cold Spring Harbor Laboratory, Cold Spring Harbor, NY 11724. 1983

Location and Sequence

[back to top]


See Help:Gene_location for help entering information in the Gene Location and DNA sequence table.

Strain Map location Genome coordinates Genome browsers Sequence links

Phage Lambda (NC_001416)

NC_001416: 27718..27746
gbrowse_img.php?coord=27713..27751&genome=bacteriophage_lambda&name=NC_001416&trackset=0&width=300&.png

edit table


Notes

Interactions

[back to top]


See Help:Product_interactions for help entering or editing information about gene product interactions in this section of EcoliWiki.

Partner Type Partner Notes References Evidence
edit table


Notes

Mutant alleles and phenotypes

[back to top]


Allele Nt change(s) Phenotype: Type Phenotype: Description Reference Availability Comments
edit table


Notes

Genetic Resources

[back to top]


See Help:Gene_resources for help entering information into the Genetic Resources table.

Resource Resource Type Source Notes/Reference
edit table

Notes

Accessions

[back to top]


See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes
edit table


Notes

References

[back to top]


See Help:References for how to manage references in EcoliWiki.

  1. ↑ 1.0 1.1 Hsu, PL et al. (1980) The lambda phage att site: functional limits and interaction with Int protein. Nature 285 85-91 PubMed

===Categories===

Retrieved from "https://ecoliwiki.org/colipedia/index.php?title=Cis_Element:Phage_lambda_attP&oldid=889011"