Cis Element:Phage lambda attP: Difference between revisions

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Table edited by Bmcintosh via TableEdit
Table edited by Bmcintosh via TableEdit
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!align=left {{table_heading_style}} |Location
!align=left {{table_heading_style}} |Location
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approximately nt 27 571 - 27 813
approximately nt 27 571 - 27 813 (PMID:6246439)


''attP'' core sequence located at nt 27 721 - 27 735
''attP'' core sequence located at nt 27 721 - 27 735 (PMID:6246439)
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!align=left {{table_heading_style}} |SO terms
!align=left {{table_heading_style}} |SO terms

Revision as of 21:05, 23 June 2009

Cis element summary table

Standard Name

lambda attP

Synonyms
Function

phage attachment site

Location

approximately nt 27 571 - 27 813 (PMID:6246439[1])

attP core sequence located at nt 27 721 - 27 735 (PMID:6246439[1])

SO terms


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Notes

In the free phage, the att site is referred to as attP (phage attachment site) while the corresponding site in a host genome is called attB (bacterial attachment site). After integration occurs to create a prophage, these sites are then known as attL (left end of prophage) and attR (right end of prophage).

Location and Sequence

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See Help:Gene_location for help entering information in the Gene Location and DNA sequence table.

Strain Map location Genome coordinates Genome browsers Sequence links

Phage Lambda (NC_001416)

NC_001416: 27718..27746
gbrowse_img.php?coord=27713..27751&genome=bacteriophage_lambda&name=NC_001416&trackset=0&width=300&.png

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Notes

Interactions

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See Help:Product_interactions for help entering or editing information about gene product interactions in this section of EcoliWiki.

Partner Type Partner Notes References Evidence
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Notes

Mutant alleles and phenotypes

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Allele Nt change(s) Phenotype: Type Phenotype: Description Reference Availability Comments
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Notes

Genetic Resources

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See Help:Gene_resources for help entering information into the Genetic Resources table.

Resource Resource Type Source Notes/Reference
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Notes

Accessions

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Database Accession Notes
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Notes

References

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  1. ↑ 1.0 1.1 Hsu, PL et al. (1980) The lambda phage att site: functional limits and interaction with Int protein. Nature 285 85-91 PubMed

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