metG:Gene Product(s): Difference between revisions
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F | F | ||
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Seeded from EcoCyc | |||
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complete | |||
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GO:0005624 | |||
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membrane fraction | |||
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PMID:16858726 | |||
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IDA: Inferred from Direct Assay | |||
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C | |||
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Seeded from EcoCyc | Seeded from EcoCyc | ||
Revision as of 02:36, 22 May 2009
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| Quickview | Gene | Gene Product(s) | Expression | Evolution | On One Page |
| Nomenclature | Function | Interactions | Localization | Sequence | Domains | Structure | Resources | Accessions | Links | References | Suggestions |
Nomenclature
See Help:Product_nomenclature for help entering or editing information in this section of EcoliWiki.
| Standard name |
MetG |
|---|---|
| Synonyms |
methionyl-tRNA synthetase[1], B2114[2][1], MetG[2][1], MetRS[2][1] |
| Product description |
methionyl-tRNA synthetase[2][3]; Component of methionyl-tRNA synthetase[2][3] Methionine--tRNA ligase[4] |
| EC number (for enzymes) | |
| edit table |
Notes
Function
Gene Ontology
See Help:Gene_ontology for help entering or editing GO terms and GO annotations in EcoliWiki.
| Qualifier | GO ID | GO term name | Reference(s) | Evidence Code | with/from | Aspect | Notes | Status |
|---|---|---|---|---|---|---|---|---|
| GO:0005515 |
protein binding |
IPI: Inferred from Physical Interaction |
F |
Seeded from EcoCyc [6] |
complete | |||
| GO:0005624 |
membrane fraction |
IDA: Inferred from Direct Assay |
C |
Seeded from EcoCyc [6] |
complete | |||
| GO:0000049 |
tRNA binding |
IEA: Inferred from Electronic Annotation |
F |
Seeded from EcoCyc [6] |
complete | |||
| GO:0000166 |
nucleotide binding |
GO_REF:0000002 |
IEA: Inferred from Electronic Annotation |
InterPro:IPR001412 |
F |
Seeded from EcoCyc [6] |
complete | |
| GO:0003723 |
RNA binding |
IEA: Inferred from Electronic Annotation |
F |
Seeded from EcoCyc [6] |
complete | |||
| GO:0004812 |
aminoacyl-tRNA ligase activity |
IEA: Inferred from Electronic Annotation |
InterPro:IPR001412 |
F |
Seeded from EcoCyc [6] |
complete | ||
| GO:0004825 |
methionine-tRNA ligase activity |
GO_REF:0000002 |
IEA: Inferred from Electronic Annotation |
InterPro:IPR002304 |
F |
Seeded from EcoCyc 12.5 [8] |
complete | |
| GO:0005524 |
ATP binding |
GO_REF:0000002 |
IEA: Inferred from Electronic Annotation |
InterPro:IPR001412 |
F |
Seeded from EcoCyc 12.5 [8] |
complete | |
| GO:0005737 |
cytoplasm |
GO_REF:0000002 |
IEA: Inferred from Electronic Annotation |
InterPro:IPR001412 |
C |
Seeded from EcoCyc 12.5 [8] |
complete | |
| GO:0006412 |
translation |
GO_REF:0000002 |
IEA: Inferred from Electronic Annotation |
InterPro:IPR001412 |
P |
Seeded from EcoCyc [6] |
complete | |
| GO:0006418 |
tRNA aminoacylation for protein translation |
IEA: Inferred from Electronic Annotation |
P |
Seeded from EcoCyc [6] |
complete | |||
| GO:0006431 |
methionyl-tRNA aminoacylation |
IEA: Inferred from Electronic Annotation |
InterPro:IPR002304 |
P |
Seeded from EcoCyc 12.5 [8] |
complete | ||
| GO:0008270 |
zinc ion binding |
IEA: Inferred from Electronic Annotation |
F |
Seeded from EcoCyc [6] |
complete | |||
| GO:0016874 |
ligase activity |
IEA: Inferred from Electronic Annotation |
F |
Seeded from EcoCyc [6] |
complete | |||
| GO:0046872 |
metal ion binding |
IEA: Inferred from Electronic Annotation |
F |
Seeded from EcoCyc [6] |
complete | |||
| GO:0005739 |
mitochondrion |
IDA: Inferred from Direct Assay |
C |
Seeded from EcoCyc [6] |
complete | |||
| GO:0005829 |
cytosol |
IDA: Inferred from Direct Assay |
C |
Seeded from EcoCyc [6] |
complete | |||
| GO:0000049 |
tRNA binding |
IEA: Inferred from Electronic Annotation |
F |
Seeded from EcoCyc |
complete | |||
| GO:0000166 |
nucleotide binding |
GO_REF:0000002 |
IEA: Inferred from Electronic Annotation |
InterPro:IPR001412 |
F |
Seeded from EcoCyc |
complete | |
| GO:0003723 |
RNA binding |
IEA: Inferred from Electronic Annotation |
F |
Seeded from EcoCyc |
complete | |||
| GO:0004812 |
aminoacyl-tRNA ligase activity |
IEA: Inferred from Electronic Annotation |
InterPro:IPR001412 |
F |
Seeded from EcoCyc |
complete | ||
| GO:0004825 |
methionine-tRNA ligase activity |
GO_REF:0000020 |
IEA: Inferred from Electronic Annotation |
HAMAP:MF_00098 |
F |
Seeded from EcoCyc |
complete | |
| GO:0005515 |
protein binding |
IPI: Inferred from Physical Interaction |
F |
Seeded from EcoCyc |
complete | |||
| GO:0005524 |
ATP binding |
GO_REF:0000020 |
IEA: Inferred from Electronic Annotation |
HAMAP:MF_00098 |
F |
Seeded from EcoCyc |
complete | |
| GO:0005624 |
membrane fraction |
IDA: Inferred from Direct Assay |
C |
Seeded from EcoCyc |
complete | |||
| edit table |
Interactions See Help:Product_interactions for help entering or editing information about gene product interactions in this section of EcoliWiki.
| Partner Type | Partner | Notes | References | Evidence |
|---|---|---|---|---|
|
Protein |
Subunits of methionyl-tRNA synthetase |
could be indirect |
||
|
Protein |
rplB |
Experiment(s):EBI-1141964 | ||
| edit table |
Notes
Localization
See Help:Product_localization for how to add or edit information in this section of EcoliWiki.
| Compartment | Description | Evidence | Notes |
|---|---|---|---|
| edit table |
Notes
Structure and Physical Properties
Physical Properties See Help:Product_physical_properties for help entering or editing information about the physical properties of this gene product.
| Sequence |
MTQVAKKILV TCALPYANGS IHLGHMLEHI QADVWVRYQR MRGHEVNFIC ADDAHGTPIM LKAQQLGITP EQMIGEMSQE HQTDFAGFNI SYDNYHSTHS EENRQLSELI YSRLKENGFI KNRTISQLYD PEKGMFLPDR FVKGTCPKCK SPDQYGDNCE VCGATYSPTE LIEPKSVVSG ATPVMRDSEH FFFDLPSFSE MLQAWTRSGA LQEQVANKMQ EWFESGLQQW DISRDAPYFG FEIPNAPGKY FYVWLDAPIG YMGSFKNLCD KRGDSVSFDE YWKKDSTAEL YHFIGKDIVY FHSLFWPAML EGSNFRKPSN LFVHGYVTVN GAKMSKSRGT FIKASTWLNH FDADSLRYYY TAKLSSRIDD IDLNLEDFVQ RVNADIVNKV VNLASRNAGF INKRFDGVLA SELADPQLYK TFTDAAEVIG EAWESREFGK AVREIMALAD LANRYVDEQA PWVVAKQEGR DADLQAICSM GINLFRVLMT YLKPVLPKLT ERAEAFLNTE LTWDGIQQPL LGHKVNPFKA LYNRIDMRQV EALVEASKEE VKAAAAPVTG PLADDPIQET ITFDDFAKVD LRVALIENAE FVEGSDKLLR LTLDLGGEKR NVFSGIRSAY PDPQALIGRH TIMVANLAPR KMRFGISEGM VMAAGPGGKD IFLLSPDAGA KPGHQVK |
|---|---|
| Length |
677 |
| Mol. Wt |
76.25 kDa (calc) [2] |
| pI | |
| Extinction coefficient |
96260 - 97260 (calc based on 24 Y, 11 W, and 8 C residues) |
| edit table |
Domains/Motifs/Modification Sites
|
See Help:Product_domains_motifs for help entering or editing information in this section of EcoliWiki.
|
<motif_map/> |
Structure See Help:Product_structure for help entering or editing information in this section of EcoliWiki.
| Structures |
<beststructure>metG 562</beststructure> |
|---|---|
| Models |
View models at: |
| edit table |
Notes
Gene Product Resources
See Help:Product_resources for help with entering or editing information in this section of EcoliWiki.
| Resource type | Source | Notes/Reference |
|---|---|---|
| edit table |
Notes
Accessions in Other Databases
See Help:Gene_accessions for help with entering information into the Gene Accessions table.
| Database | Accession | Notes |
|---|---|---|
|
| ||
| edit table |
Notes
Links
| Name | URL | Comments |
|---|---|---|
| edit table |
References
- ↑ 1.0 1.1 1.2 1.3 1.4 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
- ↑ 2.0 2.1 2.2 2.3 2.4 2.5 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ 3.0 3.1 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
- ↑ 5.0 5.1 5.2 Arifuzzaman, M et al. (2006) Large-scale identification of protein-protein interaction of Escherichia coli K-12. Genome Res. 16 686-91 PubMed
- ↑ 6.00 6.01 6.02 6.03 6.04 6.05 6.06 6.07 6.08 6.09 6.10 6.11 6.12 EcoCyc (release 13.0; 2009) Keseler, IM et al. (2009) Nucleic Acids Res. 37(Database issue):D464-70
- ↑ 7.0 7.1 7.2 7.3 Lasserre, JP et al. (2006) A complexomic study of Escherichia coli using two-dimensional blue native/SDS polyacrylamide gel electrophoresis. Electrophoresis 27 3306-21 PubMed
- ↑ 8.0 8.1 8.2 8.3 EcoCyc (release 12.5; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
Categories
- GO:0005515 ! protein binding
- GO:0005624 ! obsolete membrane fraction
- GO:0000049 ! tRNA binding
- GO:0000166 ! nucleotide binding
- GO:0003723 ! RNA binding
- GO:0004812 ! aminoacyl-tRNA ligase activity
- GO:0004825 ! methionine-tRNA ligase activity
- GO:0005524 ! ATP binding
- GO:0005737 ! cytoplasm
- GO:0006412 ! translation
- GO:0006418 ! tRNA aminoacylation for protein translation
- GO:0006431 ! methionyl-tRNA aminoacylation
- GO:0008270 ! zinc ion binding
- GO:0016874 ! ligase activity
- GO:0046872 ! metal ion binding
- GO:0005739 ! mitochondrion
- GO:0005829 ! cytosol
- Proteins
- Complex:methionyl-tRNA synthetase
- Products with structures in PDB