mhpC:Evolution: Difference between revisions

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!Organism!!Homologs (Statistics)!!Comments
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''Anopheles gambiae''   
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''Mus musculus''   
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===Do-It-Yourself Web Tools===
===Do-It-Yourself Web Tools===
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!Database!!Accession!!Notes
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[http://www.sanger.ac.uk/Software/Pfam/ PFAM] ([[PFAM|EcoliWiki Page]])  
[http://www.sanger.ac.uk/Software/Pfam/ PFAM] ([[PFAM|EcoliWiki Page]])  
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[http://www.sanger.ac.uk/cgi-bin/Pfam/getacc?PF00561 PFAM:PF00561]
[http://www.sanger.ac.uk/cgi-bin/Pfam/getacc?PF00561 PFAM:PF00561]
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===Notes===
===Notes===
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==References==
==References==
{{BacktoTop}}
{{BacktoTop}}
{{RefHelp}}
 
<references/>
<references/>
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Revision as of 21:44, 21 January 2009

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
Homologs Families Links References Suggestions

Homologs in Other Organisms

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See Help:Evolution_homologs for help entering or editing information in this section of EcoliWiki.

Organism Homologs (Statistics) Comments

Anopheles gambiae

  • ENSANGP00000013613 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Arabidopsis thaliana

  • AT1G72620 (score: 1.000; bootstrap: 100%)
  • AT1G17430 (score: 0.748)
  • AT5G09430 (score: 0.173)
  • AT4G33180 (score: 0.163)
  • AT1G78210 (score: 0.156)
  • AT5G21950 (score: 0.153)
  • AT4G39955 (score: 0.141)
  • AT2G18360 (score: 0.121)
  • AT4G36610 (score: 0.111)

From Inparanoid:20070104

Bos taurus

  • ENSBTAP00000022100 (score: 1.000; bootstrap: 53%)

From Inparanoid:20070104

Caenorhabditis elegans

  • WBGene00016507 (score: 1.000; bootstrap: 53%)
  • WBGene00016506 (score: 0.623)
  • WBGene00007711 (score: 0.176)

From Inparanoid:20070104

Canis familiaris

  • ENSCAFP00000010991 (score: 1.000; bootstrap: 52%)
  • ENSCAFP00000029897 (score: 1.000; bootstrap: 53%)
  • ENSCAFP00000023703 (score: 0.344)
  • ENSCAFP00000012415 (score: 0.171)

From Inparanoid:20070104

Ciona intestinalis

  • ENSCINP00000013631 (score: 1.000; bootstrap: 100%)
  • ENSCINP00000010598 (score: 0.926)
  • ENSCINP00000013626 (score: 0.218)

From Inparanoid:20070104

Dictyostelium discoideum

  • DDB0184562 (score: 1.000; bootstrap: 63%)

From Inparanoid:20070104

Drosophila pseudoobscura

  • GA18833-PA (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Gallus gallus

  • ENSGALP00000009676 (score: 1.000; bootstrap: 100%)
  • ENSGALP00000026689 (score: 0.097)

From Inparanoid:20070104

Homo sapiens

  • ENSP00000305683 (score: 1.000; bootstrap: 53%)
  • ENSP00000221730 (score: 0.377)
  • ENSP00000315621 (score: 0.139)

From Inparanoid:20070104

Macaca mulatta

  • ENSMMUP00000008314 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Monodelphis domestica

  • ENSMODP00000014869 (score: 1.000; bootstrap: 56%)
  • ENSMODP00000018168 (score: 0.366)

From Inparanoid:20070104

Mus musculus

  • MGI:99500 (score: 1.000; bootstrap: 62%)
  • MGI:1919182 (score: 0.066)
  • MGI:2686228 (score: 0.065)

From Inparanoid:20070104

Oryza gramene

  • Q7XI46 (score: 1.000; bootstrap: 63%)
  • Q75LP9 (score: 0.669)
  • Q8RUY8 (score: 0.508)
  • Q7G6Q1 (score: 0.508)
  • Q8H024 (score: 0.193)
  • Q8H026 (score: 0.171)
  • Q9AS70 (score: 0.164)
  • Q8H5Y0 (score: 0.156)
  • Q8S3R0 (score: 0.141)
  • Q8H025 (score: 0.136)
  • Q5VNP5 (score: 0.129)

From Inparanoid:20070104

Pan troglodytes

  • ENSPTRP00000001645 (score: 1.000; bootstrap: 59%)
  • ENSPTRP00000018121 (score: 0.337)
  • ENSPTRP00000034421 (score: 0.136)

From Inparanoid:20070104

Rattus norvegicus

  • ENSRNOP00000023914 (score: 1.000; bootstrap: 52%)

From Inparanoid:20070104

Saccharomyces cerevisiae

  • YNR064C (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Schizosaccharomyces pombe

  • SPAC6G103c (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Takifugu rubripes

  • NEWSINFRUP00000147298 (score: 1.000; bootstrap: 56%)
  • NEWSINFRUP00000139867 (score: 0.217)

From Inparanoid:20070104

Tetraodon nigroviridis

  • GSTENP00027513001 (score: 1.000; bootstrap: 56%)
  • GSTENP00027407001 (score: 0.100)

From Inparanoid:20070104

Xenopus tropicalis

  • ENSXETP00000014148 (score: 1.000; bootstrap: 88%)

From Inparanoid:20070104

E. coli O157

MHPC

From ECOO157CYC

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Do-It-Yourself Web Tools


Notes

Families

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

PFAM (EcoliWiki Page)

PFAM:PF00561


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Notes

Links

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Name URL Comments
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References

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Categories

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