tatE:Gene Product(s): Difference between revisions

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Revision as of 18:17, 20 October 2008

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
Nomenclature Function Interactions Localization Sequence Structure Resources Accessions Links References Suggestions

Nomenclature

Standard name

TatE product

Synonyms

TatABCE protein translocation system subunit product[1], B0627 product[2][1], YbeC product[2][1], TatE product[2][1]

Product description

TatE[2][3];

Component of ; TatABCE protein export complex[2][3]

EC number (for enzymes)
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See Help:Product_nomenclature for help entering or editing information in this section of EcoliWiki.

Notes

Function

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Gene Ontology
See Help:Gene_ontology for help entering or editing GO terms and GO annotations in EcoliWiki.

Qualifier GO ID GO term name Reference(s) Evidence Code with/from Aspect Notes Status
GO:0016021

integral_to_membrane

GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR006312

C

Seeded from EcoCyc 12.5 [4]

GO:0016021

integral_to_membrane

GO_REF:0000004

IEA: Inferred from Electronic Annotation

SP_KW:KW-0812

C

Seeded from EcoCyc 12.5 [4]

GO:0015031

protein_transport

GO_REF:0000020

IEA: Inferred from Electronic Annotation

HAMAP:MF_00236

P

Seeded from EcoCyc 12.5 [4]

GO:0015031

protein_transport

GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR003369

P

Seeded from EcoCyc 12.5 [4]

GO:0015031

protein_transport

GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR006312

P

Seeded from EcoCyc 12.5 [4]

GO:0015031

protein_transport

GO_REF:0000004

IEA: Inferred from Electronic Annotation

SP_KW:KW-0653

P

Seeded from EcoCyc 12.5 [4]

GO:0016020

membrane

GO_REF:0000004

IEA: Inferred from Electronic Annotation

SP_KW:KW-0397

C

Seeded from EcoCyc 12.5 [4]

GO:0016020

membrane

GO_REF:0000004

IEA: Inferred from Electronic Annotation

SP_KW:KW-0472

C

Seeded from EcoCyc 12.5 [4]

GO:0005515

protein_binding

PMID:16606699[5]

IPI: Inferred from Physical Interaction

UniProtKB:P24251

F

Seeded from EcoCyc 12.5 [4]

GO:0006810

transport

GO_REF:0000004

IEA: Inferred from Electronic Annotation

SP_KW:KW-0813

P

Seeded from EcoCyc 12.5 [4]

GO:0008565

protein_transporter_activity

GO_REF:0000020

IEA: Inferred from Electronic Annotation

HAMAP:MF_00236

F

Seeded from EcoCyc 12.5 [4]

GO:0008565

protein_transporter_activity

GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR003369

F

Seeded from EcoCyc 12.5 [4]

GO:0009306

protein_secretion

GO_REF:0000020

IEA: Inferred from Electronic Annotation

HAMAP:MF_00236

P

Seeded from EcoCyc 12.5 [4]

GO:0015292

uniporter activity

F

Seeded from EcoCyc 11.1[3].

required fields missing

GO:0065002

intracellular_protein_transport_across_a_membrane

GO_REF:0000004

IEA: Inferred from Electronic Annotation

SP_KW:KW-0811

P

Seeded from EcoCyc 12.5 [4]


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Interactions

Partner Type Partner Notes

Protein

Subunits of TatABCE protein export complex

could be indirect

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See Help:Product_interactions for help entering or editing information about gene product interactions in this section of EcoliWiki.

Notes

Localization

Compartment Description Evidence Notes
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See Help:Product_localization for how to add or edit information in this section of EcoliWiki.


Notes

Structure and Physical Properties

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Physical Properties

Sequence

at EcoCyc 

MGEISITKLL VVAALVVLLF GTKKLRTLGG DLGAAIKGFK KAMNDDDAAA KKGADVDLQA
EKLSHKE
Mol. Wt

7.02 kDa (calc) [2]

pI
Extinction coefficient

0 (calc based on 0 Y, 0 W, and 0 C residues)

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See Help:Product_physical_properties for help entering or editing information about the physical properties of this gene product.

Domains/Motifs/Modification Sites

Type Residues Description Notes
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See Help:Product_domains_motifs for help entering or editing information in this section of EcoliWiki.

Structure

Structures
Models
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See Help:Product_structure for help entering or editing information in this section of EcoliWiki.

Notes

Gene Product Resources

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Resource type Source Notes/Reference
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See Help:Product_resources for help with entering or editing information in this section of EcoliWiki.

Notes

Accessions in Other Databases

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Database Accession Notes

EcoCyc (EcoliWiki Page)

EcoCyc:EG11305-MONOMER

UniProt (EcoliWiki Page)

UniProt:P0A843

PFAM (EcoliWiki Page)

PFAM:PF02416

RefSeq (EcoliWiki Page)

RefSeq:NP_415160

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See Help:Product_accessions for help entering or editing information in this section of EcoliWiki.

Notes

Links

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Name URL Comments
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References

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See Help:References for how to manage references in EcoliWiki.

  1. ↑ 1.0 1.1 1.2 1.3 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 2.5 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ 3.0 3.1 3.2 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.00 4.01 4.02 4.03 4.04 4.05 4.06 4.07 4.08 4.09 4.10 4.11 4.12 4.13 EcoCyc (release 12.5; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  5. ↑ Arifuzzaman, M et al. (2006) Large-scale identification of protein-protein interaction of Escherichia coli K-12. Genome Res. 16 686-91 PubMed


Categories

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