tatE:Gene Product(s): Difference between revisions
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!|Qualifier!!GO ID!!GO term name!!Reference(s)!!Evidence Code!!with/from!!Aspect!!Notes!!Status | !|Qualifier!!GO ID!!GO term name!!Reference(s)!!Evidence Code!!with/from!!Aspect!!Notes!!Status | ||
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[[Category:GO:0015031_!_protein_transport]][http://gowiki.tamu.edu/wiki/index.php/Category:GO:0015031_!_protein_transport GO:0015031] | |||
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protein_transport | |||
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[http://www.geneontology.org/cgi-bin/references.cgi/#GO_REF:0000020 GO_REF:0000020]<br /> | |||
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IEA: Inferred from Electronic Annotation | |||
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HAMAP:MF_00236 | |||
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P | |||
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Seeded from EcoCyc 12.5 <ref name = 'LIB:EcoCyc12.5'/> | |||
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protein_transport | protein_transport | ||
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[http://www.geneontology.org/cgi-bin/references.cgi/#GO_REF: | [http://www.geneontology.org/cgi-bin/references.cgi/#GO_REF:0000002 GO_REF:0000002]<br /> | ||
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IEA: Inferred from Electronic Annotation | IEA: Inferred from Electronic Annotation | ||
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InterPro:IPR003369 | |||
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P | P | ||
Revision as of 06:11, 30 September 2008
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| Quickview | Gene | Gene Product(s) | Expression | Evolution | On One Page |
| Nomenclature | Function | Interactions | Localization | Sequence | Structure | Resources | Accessions | Links | References | Suggestions |
Nomenclature
| Standard name |
TatE product |
|---|---|
| Synonyms |
TatABCE protein translocation system subunit product[1], B0627 product[2][1], YbeC product[2][1], TatE product[2][1] |
| Product description |
Component of ; TatABCE protein export complex[2][3] |
| EC number (for enzymes) |
|
| edit table | |
See Help:Product_nomenclature for help entering or editing information in this section of EcoliWiki.
Notes
Function
Gene Ontology
| Qualifier | GO ID | GO term name | Reference(s) | Evidence Code | with/from | Aspect | Notes | Status |
|---|---|---|---|---|---|---|---|---|
| GO:0015031 |
protein_transport |
IEA: Inferred from Electronic Annotation |
P |
Seeded from EcoCyc 12.5 [4] |
||||
| GO:0005515 |
protein_binding |
IPI: Inferred from Physical Interaction |
F |
Seeded from EcoCyc 12.5 [4] |
||||
| GO:0006810 |
transport |
IEA: Inferred from Electronic Annotation |
P |
Seeded from EcoCyc 12.5 [4] |
||||
| GO:0008565 |
protein_transporter_activity |
IEA: Inferred from Electronic Annotation |
F |
Seeded from EcoCyc 12.5 [4] |
||||
| GO:0008565 |
protein_transporter_activity |
IEA: Inferred from Electronic Annotation |
F |
Seeded from EcoCyc 12.5 [4] |
||||
| GO:0009306 |
protein_secretion |
IEA: Inferred from Electronic Annotation |
P |
Seeded from EcoCyc 12.5 [4] |
||||
| GO:0015292 |
uniporter activity |
F |
Seeded from EcoCyc 11.1[3]. |
required fields missing | ||||
| GO:0015031 |
protein_transport |
IEA: Inferred from Electronic Annotation |
P |
Seeded from EcoCyc 12.5 [4] |
| |||
| edit table |
See Help:Gene_ontology for help entering or editing GO terms and GO annotations in EcoliWiki.
Interactions
| Partner Type | Partner | Notes |
|---|---|---|
|
Protein |
Subunits of TatABCE protein export complex |
could be indirect |
| edit table |
See Help:Product_interactions for help entering or editing information about gene product interactions in this section of EcoliWiki.
Notes
Localization
| Compartment | Description | Evidence | Notes |
|---|---|---|---|
| edit table |
See Help:Product_localization for how to add or edit information in this section of EcoliWiki.
Notes
Structure and Physical Properties
Physical Properties
| Sequence |
MGEISITKLL VVAALVVLLF GTKKLRTLGG DLGAAIKGFK KAMNDDDAAA KKGADVDLQA EKLSHKE |
|---|---|
| Mol. Wt |
7.02 kDa (calc) [2] |
| pI | |
| Extinction coefficient |
0 (calc based on 0 Y, 0 W, and 0 C residues) |
| edit table | |
See Help:Product_physical_properties for help entering or editing information about the physical properties of this gene product.
Domains/Motifs/Modification Sites
| Type | Residues | Description | Notes |
|---|---|---|---|
| edit table |
See Help:Product_domains_motifs for help entering or editing information in this section of EcoliWiki.
Structure
| Structure Type | Organism | Accession | Residues covered | Notes |
|---|---|---|---|---|
| edit table |
See Help:Product_structure for help entering or editing information in this section of EcoliWiki.
Notes
Gene Product Resources
| Resource type | Source | Notes/Reference |
|---|---|---|
| edit table |
See Help:Product_resources for help with entering or editing information in this section of EcoliWiki.
Notes
Accessions in Other Databases
| Database | Accession | Notes |
|---|---|---|
| edit table |
See Help:Product_accessions for help entering or editing information in this section of EcoliWiki.
Notes
Links
| Name | URL | Comments |
|---|---|---|
| edit table |
See Help:Links_table for how to enter or edit information in this section of EcoliWiki.
References
See Help:References for how to manage references in EcoliWiki.
- ↑ 1.0 1.1 1.2 1.3 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
- ↑ 2.0 2.1 2.2 2.3 2.4 2.5 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ 3.0 3.1 3.2 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ 4.0 4.1 4.2 4.3 4.4 4.5 4.6 EcoCyc (release 12.5; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ Arifuzzaman, M et al. (2006) Large-scale identification of protein-protein interaction of Escherichia coli K-12. Genome Res. 16 686-91 PubMed
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