metG:Gene Product(s): Difference between revisions

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EC:6.1.1.10
EC:6.1.1.10
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F
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Seeded from EcoCyc 12.5 <ref name = 'LIB:EcoCyc12.5'/>
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[[Category:GO:0005515_!_protein_binding]][http://gowiki.tamu.edu/wiki/index.php/Category:GO:0005515_!_protein_binding GO:0005515]
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protein_binding
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[[PMID:16606699]]<ref name=PMID:16606699/><br />
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IPI: Inferred from Physical Interaction
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UniProtKB:P60422
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F
F
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[[Category:GO:0005515_!_protein_binding]][http://gowiki.tamu.edu/wiki/index.php/Category:GO:0005515_!_protein_binding GO:0005515]
[[Category:GO:0005524_!_ATP_binding]][http://gowiki.tamu.edu/wiki/index.php/Category:GO:0005524_!_ATP_binding GO:0005524]
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protein_binding
ATP_binding
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[[PMID:16606699]]<ref name=PMID:16606699/><br />
[http://www.geneontology.org/cgi-bin/references.cgi/#GO_REF:0000020 GO_REF:0000020]<br />
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IPI: Inferred from Physical Interaction
IEA: Inferred from Electronic Annotation
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UniProtKB:P60422
HAMAP:MF_00098
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F
F

Revision as of 02:50, 30 September 2008

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
Nomenclature Function Interactions Localization Sequence Structure Resources Accessions Links References Suggestions

Nomenclature

Standard name

MetG product

Synonyms

methionyl-tRNA synthetase product[1], B2114 product[2][1], MetG product[2][1], MetRS product[2][1]

Product description

methionyl-tRNA synthetase[2][3];

Component of ; methionyl-tRNA synthetase[2][3]

EC number (for enzymes)
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Notes

Function

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Gene Ontology

Qualifier GO ID GO term name Reference(s) Evidence Code with/from Aspect Notes Status
GO:0004812

aminoacyl-tRNA_ligase_activity

GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR009080

F

Seeded from EcoCyc 12.5 [4]

GO:0004812

aminoacyl-tRNA_ligase_activity

GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR015413

F

Seeded from EcoCyc 12.5 [4]

GO:0004812

aminoacyl-tRNA_ligase_activity

GO_REF:0000004

IEA: Inferred from Electronic Annotation

SP_KW:KW-0030

F

Seeded from EcoCyc 12.5 [4]

GO:0004825

methionine-tRNA_ligase_activity

GO_REF:0000020

IEA: Inferred from Electronic Annotation

HAMAP:MF_00098

F

Seeded from EcoCyc 12.5 [4]

GO:0004825

methionine-tRNA_ligase_activity

GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR002304

F

Seeded from EcoCyc 12.5 [4]

GO:0004825

methionine-tRNA_ligase_activity

GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR004495

F

Seeded from EcoCyc 12.5 [4]

GO:0004825

methionine-tRNA_ligase_activity

GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR014758

F

Seeded from EcoCyc 12.5 [4]

GO:0004825

methionine-tRNA_ligase_activity

GO_REF:0000003

IEA: Inferred from Electronic Annotation

EC:6.1.1.10

F

Seeded from EcoCyc 12.5 [4]

GO:0005515

protein_binding

PMID:16606699[5]

IPI: Inferred from Physical Interaction

UniProtKB:P60422

F

Seeded from EcoCyc 12.5 [4]

GO:0003723

RNA_binding

GO_REF:0000004

IEA: Inferred from Electronic Annotation

SP_KW:KW-0694

F

Seeded from EcoCyc 12.5 [4]

GO:0004812

aminoacyl-tRNA_ligase_activity

GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR001412

F

Seeded from EcoCyc 12.5 [4]

GO:0000166

nucleotide_binding

GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR015413

F

Seeded from EcoCyc 12.5 [4]

GO:0000166

nucleotide_binding

GO_REF:0000004

IEA: Inferred from Electronic Annotation

SP_KW:KW-0547

F

Seeded from EcoCyc 12.5 [4]

GO:0000166

nucleotide_binding

GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR009080

F

Seeded from EcoCyc 12.5 [4]

GO:0000166

nucleotide_binding

GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR014758

F

Seeded from EcoCyc 12.5 [4]

GO:0000049

tRNA_binding

GO_REF:0000004

IEA: Inferred from Electronic Annotation

SP_KW:KW-0820

F

Seeded from EcoCyc 12.5 [4]

GO:0000166

nucleotide_binding

GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR001412

F

Seeded from EcoCyc 12.5 [4]

GO:0000166

nucleotide_binding

GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR002304

F

Seeded from EcoCyc 12.5 [4]

GO:0000166

nucleotide_binding

GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR004495

F

Seeded from EcoCyc 12.5 [4]

GO:0000049

tRNA_binding

GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR002547

F

Seeded from EcoCyc 12.5 [4]

GO:0005737

cytoplasm

C

Seeded from EcoCyc 11.1[3].

required fields missing

GO:0006418

tRNA aminoacylation for protein translation

P

Seeded from EcoCyc 11.1[3].

required fields missing

GO:0005524

ATP_binding

GO_REF:0000020

IEA: Inferred from Electronic Annotation

HAMAP:MF_00098

F

Seeded from EcoCyc 12.5 [4]


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Interactions

Partner Type Partner Notes

Protein

Subunits of methionyl-tRNA synthetase

could be indirect

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Notes

Localization

Compartment Description Evidence Notes
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Notes

Structure and Physical Properties

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Physical Properties

Sequence

at EcoCyc 

MTQVAKKILV TCALPYANGS IHLGHMLEHI QADVWVRYQR MRGHEVNFIC ADDAHGTPIM
LKAQQLGITP EQMIGEMSQE HQTDFAGFNI SYDNYHSTHS EENRQLSELI YSRLKENGFI
KNRTISQLYD PEKGMFLPDR FVKGTCPKCK SPDQYGDNCE VCGATYSPTE LIEPKSVVSG
ATPVMRDSEH FFFDLPSFSE MLQAWTRSGA LQEQVANKMQ EWFESGLQQW DISRDAPYFG
FEIPNAPGKY FYVWLDAPIG YMGSFKNLCD KRGDSVSFDE YWKKDSTAEL YHFIGKDIVY
FHSLFWPAML EGSNFRKPSN LFVHGYVTVN GAKMSKSRGT FIKASTWLNH FDADSLRYYY
TAKLSSRIDD IDLNLEDFVQ RVNADIVNKV VNLASRNAGF INKRFDGVLA SELADPQLYK
TFTDAAEVIG EAWESREFGK AVREIMALAD LANRYVDEQA PWVVAKQEGR DADLQAICSM
GINLFRVLMT YLKPVLPKLT ERAEAFLNTE LTWDGIQQPL LGHKVNPFKA LYNRIDMRQV
EALVEASKEE VKAAAAPVTG PLADDPIQET ITFDDFAKVD LRVALIENAE FVEGSDKLLR
LTLDLGGEKR NVFSGIRSAY PDPQALIGRH TIMVANLAPR KMRFGISEGM VMAAGPGGKD
IFLLSPDAGA KPGHQVK
Mol. Wt

76.25 kDa (calc) [2]

pI
Extinction coefficient

96260 - 97260 (calc based on 24 Y, 11 W, and 8 C residues)

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Domains/Motifs/Modification Sites

Type Residues Description Notes
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Structure

Structure Type Organism Accession Residues covered Notes

X-RAY DIFFRACTION

Escherichia coli

1F4L CRYSTAL STRUCTURE OF THE E.COLI METHIONYL-TRNA SYNTHETASE COMPLEXED WITH METHIONINE

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Notes

Gene Product Resources

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Resource type Source Notes/Reference
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Notes

Accessions in Other Databases

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Database Accession Notes

EcoCyc (EcoliWiki Page)

EcoCyc:METG-MONOMER

SwissModel (EcoliWiki Page)

SwissModel:P00959

UniProt (EcoliWiki Page)

UniProt:P00959

PFAM (EcoliWiki Page)

PFAM:PF00133

RefSeq (EcoliWiki Page)

RefSeq:NP_416617

ModBase (EcoliWiki Page)

ModBase:P00959

PDB (EcoliWiki Page)

PDB:1F4L

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Notes

Links

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Name URL Comments
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References

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See Help:References for how to manage references in EcoliWiki.

  1. ↑ 1.0 1.1 1.2 1.3 1.4 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 2.5 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ 3.0 3.1 3.2 3.3 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.00 4.01 4.02 4.03 4.04 4.05 4.06 4.07 4.08 4.09 4.10 4.11 4.12 4.13 4.14 4.15 4.16 4.17 4.18 4.19 4.20 EcoCyc (release 12.5; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  5. ↑ Arifuzzaman, M et al. (2006) Large-scale identification of protein-protein interaction of Escherichia coli K-12. Genome Res. 16 686-91 PubMed


Categories

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