sdhC:Gene Product(s): Difference between revisions

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GO:0000104
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succinate dehydrogenase activity
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F
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Revision as of 16:30, 24 October 2007

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
Nomenclature Function Interactions Localization Sequence Structure Resources Accessions Links References Suggestions

Nomenclature

Standard name

SdhC product

Synonyms

succinate dehydrogenase, membrane subunit, binds cytochrome b556 product[1], B0721 product[2][1], DhsC product[2][1], CybA product[2][1], SdhC product[2][1], large subunit of cytochrome b556 product[2][1], CybL product[2][1]

Product description

succinate dehydrogenase membrane protein[2][3];

Component of ; membrane-bound subcomplex of succinate dehydrogenase[3]; succinate dehydrogenase[3]

EC number (for enzymes)
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Notes

Function

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Gene Ontology

Qualifier GO ID GO term name Reference(s) Evidence Code with/from Aspect Notes Status
GO:0006099

tricarboxylic acid cycle

P

Seeded from EcoCyc 11.1[3].

required fields missing

GO:0009053

electron donor activity

F

Seeded from EcoCyc 11.1[3].

required fields missing

GO:0017004

cytochrome complex assembly

P

Seeded from EcoCyc 11.1[3].

required fields missing

GO:0009060

aerobic respiration

P

Seeded from EcoCyc 11.1[3].

required fields missing

GO:0000104

succinate dehydrogenase activity

F

required field missing

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Interactions

Partner Type Partner Notes

Protein

Subunits of membrane-bound subcomplex of succinate dehydrogenase

could be indirect

Protein

Subunits of succinate dehydrogenase

could be indirect

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Notes

Localization

Compartment Description Evidence Notes

plasma membrane

From EcoCyc[3]

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Notes

Structure and Physical Properties

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Physical Properties

Sequence

at EcoCyc 

MIRNVKKQRP VNLDLQTIRF PITAIASILH RVSGVITFVA VGILLWLLGT SLSSPEGFEQ
ASAIMGSFFV KFIMWGILTA LAYHVVVGIR HMMMDFGYLE ETFEAGKRSA KISFVITVVL
SLLAGVLVW
Mol. Wt

14.3 kDa (calc) [2]

pI
Extinction coefficient

19480 (calc based on 2 Y, 3 W, and 0 C residues)

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Domains/Motifs/Modification Sites

Type Residues Description Notes
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Structure

Structure Type Organism Accession Residues covered Notes

X-RAY DIFFRACTION

Escherichia coli

1NEN Complex II (Succinate Dehydrogenase) From E. Coli with Dinitrophenol-17 inhibitor co-crystallized at the ubiquinone binding site

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Notes

Gene Product Resources

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Resource type Source Notes/Reference
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Notes

Accessions in Other Databases

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Database Accession Notes

EcoCyc (EcoliWiki Page)

EcoCyc:SDH-MEMB1

UniProt (EcoliWiki Page)

UniProt:P69054

PFAM (EcoliWiki Page)

PFAM:PF01127

RefSeq (EcoliWiki Page)

RefSeq:NP_415249

ModBase (EcoliWiki Page)

ModBase:P69054

PDB (EcoliWiki Page)

PDB:1NEN

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Notes

Links

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Name URL Comments
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References

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See Help:References for how to manage references in EcoliWiki.

  1. ↑ 1.0 1.1 1.2 1.3 1.4 1.5 1.6 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 2.5 2.6 2.7 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ 3.0 3.1 3.2 3.3 3.4 3.5 3.6 3.7 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7


Categories

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