Phage lambda cII:Gene: Difference between revisions

From EcoliWiki
Jump to navigation Jump to search
← Older editNewer edit →
edited by JimHu via TableEdit
imported>WikiEntryBot
Automated import of articles
Line 21: Line 21:
|{{Sub}}[[Talk:{{PAGENAMEE}}| Suggestions]]
|{{Sub}}[[Talk:{{PAGENAMEE}}| Suggestions]]
|}
|}
[[Category:Gene List:Phage lambda]]
</noinclude><protect>
</noinclude><protect>
==Nomenclature==
==Nomenclature==
{{BacktoTop}}
{{BacktoTop}}
<!--box uid=421aa90e079fa326b6494f812ad13e79..V46a3d828b7ce0-->
<!--box uid=421aa90e079fa326b6494f812ad13e79..Z46b16ff8b073b-->
<!--*** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. *** -->
<!--
******************************************************************************************
*
*  ** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. **
*
****************************************************************************************** -->
{|{{Prettytable}}
{|{{Prettytable}}
|-
|-
Line 41: Line 45:
''cII, lambdap59''
''cII, lambdap59''
|-
|-
|colspan='4'|[{{SERVER}}/colipedia/index.php/Special:TableEdit?id=421aa90e079fa326b6494f812ad13e79..V46a3d828b7ce0&page=&pagename={{FULLPAGENAMEE}} edit table]
|colspan='2'|[{{SERVER}}/colipedia/index.php?title=Special:TableEdit&id=421aa90e079fa326b6494f812ad13e79..Z46b16ff8b073b&page=&pagename={{FULLPAGENAMEE}} edit table]
|}
|}
<!--box uid=421aa90e079fa326b6494f812ad13e79..V46a3d828b7ce0-->
<!--box uid=421aa90e079fa326b6494f812ad13e79..Z46b16ff8b073b-->
{{Gene_nomenclature_help}}
{{Gene_nomenclature_help}}
<!--Nomenclature_notes--></protect>
<!--Nomenclature_notes--></protect>
Line 52: Line 56:
{{BacktoTop}}
{{BacktoTop}}
<protect>
<protect>
<!--box uid=421aa90e079fa326b6494f812ad13e79..F46a3d828e8969-->
<!--box uid=421aa90e079fa326b6494f812ad13e79..A46b16ff990dda-->
<!--*** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. *** -->
<!--
{|class = 'sortable' {{Prettytable}} id='94376'  
******************************************************************************************
*
*  ** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. **
*
****************************************************************************************** -->
{|class = 'sortable' {{Prettytable}} id='218684'  
|- {{table_heading_style}}
|- {{table_heading_style}}
!Strain!!Map location!!Genome coordinates!!Genome browsers!!Sequence links
!Strain!!Map location!!Genome coordinates!!Genome browsers!!Sequence links
Line 61: Line 70:
NC_001416
NC_001416
|
|
&nbsp;
|
|
NC_001416: 38360..38653<br />{{GBrowseFigureByCoord|37360|39653|bacteriophage_lambda|NC_001416}}  
NC_001416: 38360..38653<br />{{GBrowseFigureByCoord|37360|39653|bacteriophage_lambda|NC_001416}}  
Line 69: Line 78:
*[http://dimer.tamu.edu/cgi-bin/gb/gbrowse/bacteriophage_lambda/?plugin=FastaDumper&name=NC_001416:38360..38653&plugin_action=Go FASTA Dump]  
*[http://dimer.tamu.edu/cgi-bin/gb/gbrowse/bacteriophage_lambda/?plugin=FastaDumper&name=NC_001416:38360..38653&plugin_action=Go FASTA Dump]  
|-class='sortbottom'
|-class='sortbottom'
|[{{SERVER}}/colipedia/index.php/Special:TableEdit?id=421aa90e079fa326b6494f812ad13e79..F46a3d828e8969&page=&pagename={{FULLPAGENAMEE}} edit table] || || || ||
|[{{SERVER}}/colipedia/index.php?title=Special:TableEdit&id=421aa90e079fa326b6494f812ad13e79..A46b16ff990dda&page=&pagename={{FULLPAGENAMEE}} edit table] || || || ||
|}
|}
<!--box uid=421aa90e079fa326b6494f812ad13e79..F46a3d828e8969-->
<!--box uid=421aa90e079fa326b6494f812ad13e79..A46b16ff990dda-->
{{Gene_location_help}}
{{Gene_location_help}}
<!--Location_notes--></protect>
<!--Location_notes--></protect>
Line 80: Line 89:
{{BacktoTop}}
{{BacktoTop}}
<!--box uid=421aa90e079fa326b6494f812ad13e79..M46a3d8292f0e3-->
<!--box uid=421aa90e079fa326b6494f812ad13e79..M46a3d8292f0e3-->
<!--*** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. *** -->
<!--
******************************************************************************************
*
*  ** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. **
*
****************************************************************************************** -->
{|class = 'sortable' {{Prettytable}} id='94377'  
{|class = 'sortable' {{Prettytable}} id='94377'  
|- {{table_heading_style}}
|- {{table_heading_style}}
!Feature type!!Location!!Description
!Feature type!!Location!!Description
|-class='sortbottom'
|-class='sortbottom'
|[{{SERVER}}/colipedia/index.php/Special:TableEdit?id=421aa90e079fa326b6494f812ad13e79..M46a3d8292f0e3&page=&pagename={{FULLPAGENAMEE}} edit table] || ||
|[{{SERVER}}/colipedia/index.php?title=Special:TableEdit&id=421aa90e079fa326b6494f812ad13e79..M46a3d8292f0e3&page=&pagename={{FULLPAGENAMEE}} edit table] || ||
|}
|}
<!--box uid=421aa90e079fa326b6494f812ad13e79..M46a3d8292f0e3-->
<!--box uid=421aa90e079fa326b6494f812ad13e79..M46a3d8292f0e3-->
Line 95: Line 109:
==Alleles and Phenotypes==
==Alleles and Phenotypes==
{{BacktoTop}}
{{BacktoTop}}
<!--box uid=421aa90e079fa326b6494f812ad13e79..C46a3d8295fb3f-->
<!--box uid=421aa90e079fa326b6494f812ad13e79..M46b16ffb2316d-->
<!--*** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. *** -->
<!--
{|class = 'sortable' {{Prettytable}} id='94378'  
******************************************************************************************
*
*  ** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. **
*
****************************************************************************************** -->
{|class = 'sortable' {{Prettytable}} id='218685'  
|- {{table_heading_style}}
|- {{table_heading_style}}
!Allele!!Nt change(s)!!AA change(s)!!Phenotype: Type!!Phenotype: Description!!Reference!!Availability
!Allele!!Nt change(s)!!AA change(s)!!Phenotype: Type!!Phenotype: Description!!Reference!!Availability!!Comments
|-
|-
|
|
Line 105: Line 124:
|
|
t &rarr;g on the + strand at bp 38364
t &rarr;g on the + strand at bp 38364
|
&nbsp;
|
|
&nbsp;
&nbsp;
Line 120: Line 141:
|
|
c &rarr;t on the + strand at bp 38370
c &rarr;t on the + strand at bp 38370
|
&nbsp;
|
|
&nbsp;
&nbsp;
Line 135: Line 158:
|
|
a &rarr;t on the + strand at bp 38371
a &rarr;t on the + strand at bp 38371
|
&nbsp;
|
|
&nbsp;
&nbsp;
Line 150: Line 175:
|
|
a &rarr;g on the + strand at bp 38376
a &rarr;g on the + strand at bp 38376
|
&nbsp;
|
|
&nbsp;
&nbsp;
Line 165: Line 192:
|
|
g &rarr;a on the + strand at bp 38379
g &rarr;a on the + strand at bp 38379
|
&nbsp;
|
|
&nbsp;
&nbsp;
Line 180: Line 209:
|
|
c &rarr;t on the + strand at bp 38380
c &rarr;t on the + strand at bp 38380
|
&nbsp;
|
|
&nbsp;
&nbsp;
Line 195: Line 226:
|
|
t &rarr;c on the + strand at bp 38430
t &rarr;c on the + strand at bp 38430
|
&nbsp;
|
|
&nbsp;
&nbsp;
Line 206: Line 239:
&nbsp;  
&nbsp;  
|-class='sortbottom'
|-class='sortbottom'
|[{{SERVER}}/colipedia/index.php/Special:TableEdit?id=421aa90e079fa326b6494f812ad13e79..C46a3d8295fb3f&page=&pagename={{FULLPAGENAMEE}} edit table] || || || || || ||
|[{{SERVER}}/colipedia/index.php?title=Special:TableEdit&id=421aa90e079fa326b6494f812ad13e79..M46b16ffb2316d&page=&pagename={{FULLPAGENAMEE}} edit table] || || || || || || ||
|}
|}
<!--box uid=421aa90e079fa326b6494f812ad13e79..C46a3d8295fb3f-->
<!--box uid=421aa90e079fa326b6494f812ad13e79..M46b16ffb2316d-->
{{Gene_alleles_help}}
{{Gene_alleles_help}}
<protect><!--Alleles_notes--></protect>
<protect><!--Alleles_notes--></protect>
Line 217: Line 250:
{{BacktoTop}}
{{BacktoTop}}
<!--box uid=421aa90e079fa326b6494f812ad13e79..Q46a3d829901b2-->
<!--box uid=421aa90e079fa326b6494f812ad13e79..Q46a3d829901b2-->
<!--*** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. *** -->
<!--
******************************************************************************************
*
*  ** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. **
*
****************************************************************************************** -->
{|class = 'sortable' {{Prettytable}} id='94379'  
{|class = 'sortable' {{Prettytable}} id='94379'  
|- {{table_heading_style}}
|- {{table_heading_style}}
!Resource!!Resource Type!!Source!!Notes/Reference
!Resource!!Resource Type!!Source!!Notes/Reference
|-class='sortbottom'
|-class='sortbottom'
|[{{SERVER}}/colipedia/index.php/Special:TableEdit?id=421aa90e079fa326b6494f812ad13e79..Q46a3d829901b2&page=&pagename={{FULLPAGENAMEE}} edit table] || || ||
|[{{SERVER}}/colipedia/index.php?title=Special:TableEdit&id=421aa90e079fa326b6494f812ad13e79..Q46a3d829901b2&page=&pagename={{FULLPAGENAMEE}} edit table] || || ||
|}
|}
<!--box uid=421aa90e079fa326b6494f812ad13e79..Q46a3d829901b2-->
<!--box uid=421aa90e079fa326b6494f812ad13e79..Q46a3d829901b2-->
Line 232: Line 270:
==Accessions in Other Databases==
==Accessions in Other Databases==
{{BacktoTop}}
{{BacktoTop}}
<!--box uid=421aa90e079fa326b6494f812ad13e79..B46a3d829c0a88-->
<!--box uid=421aa90e079fa326b6494f812ad13e79..B46b17004a1fd2-->
<!--*** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. *** -->
<!--
{|class = 'sortable' {{Prettytable}} id='94380'  
******************************************************************************************
*
*  ** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. **
*
****************************************************************************************** -->
{|class = 'sortable' {{Prettytable}} id='218686'  
|- {{table_heading_style}}
|- {{table_heading_style}}
!Database!!Accession!!Notes
!Database!!Accession!!Notes
|-
|
[http://www.ncbi.nlm.nih.gov/sites/entrez?db=gene Genbank] ([[Genbank|EcoliWiki Page]])
|
[http://www.ncbi.nlm.nih.gov/sites/entrez?db=gene&cmd=&term=2703494 Genbank:2703494] 
|
|-class='sortbottom'
|-class='sortbottom'
|[{{SERVER}}/colipedia/index.php/Special:TableEdit?id=421aa90e079fa326b6494f812ad13e79..B46a3d829c0a88&page=&pagename={{FULLPAGENAMEE}} edit table] || ||
|[{{SERVER}}/colipedia/index.php?title=Special:TableEdit&id=421aa90e079fa326b6494f812ad13e79..B46b17004a1fd2&page=&pagename={{FULLPAGENAMEE}} edit table] || ||
|}
|}
<!--box uid=421aa90e079fa326b6494f812ad13e79..B46a3d829c0a88-->
<!--box uid=421aa90e079fa326b6494f812ad13e79..B46b17004a1fd2-->
{{Gene_accessions_help}}
{{Gene_accessions_help}}
<protect><!--Gene_accessions_notes--></protect>
<protect><!--Gene_accessions_notes--></protect>
Line 255: Line 291:
==Links==
==Links==
{{BacktoTop}}
{{BacktoTop}}
<!--box uid=421aa90e079fa326b6494f812ad13e79..M46a3d82a06618-->
<!--box uid=421aa90e079fa326b6494f812ad13e79..E46b1700563e74-->
<!--*** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. *** -->
<!--
{|class = 'sortable' {{Prettytable}} id='94381'  
******************************************************************************************
*
*  ** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. **
*
****************************************************************************************** -->
{|class = 'sortable' {{Prettytable}} id='218687'  
|- {{table_heading_style}}
|- {{table_heading_style}}
!Name!!URL!!Comments
!Name!!URL!!Comments
|-class='sortbottom'
|-class='sortbottom'
|[{{SERVER}}/colipedia/index.php/Special:TableEdit?id=421aa90e079fa326b6494f812ad13e79..M46a3d82a06618&page=&pagename={{FULLPAGENAMEE}} edit table] || ||
|[{{SERVER}}/colipedia/index.php?title=Special:TableEdit&id=421aa90e079fa326b6494f812ad13e79..E46b1700563e74&page=&pagename={{FULLPAGENAMEE}} edit table] || ||
|}
|}
<!--box uid=421aa90e079fa326b6494f812ad13e79..M46a3d82a06618-->
<!--box uid=421aa90e079fa326b6494f812ad13e79..E46b1700563e74-->
{{Links_help}}
{{Links_help}}


Line 273: Line 314:
__NOTOC__
__NOTOC__
</protect></noinclude>
</protect></noinclude>
===Categories===
[[Category:Gene List:Phage lambda]]

Revision as of 05:47, 2 August 2007

{{#css:Suppresslinks.css}}<css>h1 .editsection { display:none;} h2 .editsection { display:none;}</css>

Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
Nomenclature Location(s) and DNA Sequence Alleles and Phenotypes Genetic Resources Accessions Links References Suggestions

Nomenclature

[back to top]


Standard name

Phage lambda cII

Mnemonic
Synonyms

cII, lambdap59

edit table

See Help:Gene_nomenclature for help with entering information in the Gene Nomenclature table.

Notes

Location(s) and DNA Sequence

[back to top]


Strain Map location Genome coordinates Genome browsers Sequence links

NC_001416

NC_001416: 38360..38653
gbrowse_img.php?coord=37360..39653&genome=bacteriophage_lambda&name=NC_001416&trackset=0&width=300&.png

edit table

See Help:Gene_location for help entering information in the Gene Location and DNA sequence table.

Notes

Sequence Features

[back to top]


Feature type Location Description
edit table

See Help:Gene_sequence_features for help in entering sequence features in EcoliWiki.

Notes

Alleles and Phenotypes

[back to top]


Allele Nt change(s) AA change(s) Phenotype: Type Phenotype: Description Reference Availability Comments

can1

t →g on the + strand at bp 38364

 

 

 

 

 

 

cy3003

c →t on the + strand at bp 38370

 

 

 

 

 

 

cy42

a →t on the + strand at bp 38371

 

 

 

 

 

 

cy844

a →g on the + strand at bp 38376

 

 

 

 

 

 

cy3008

g →a on the + strand at bp 38379

 

 

 

 

 

 

cy3001

c →t on the + strand at bp 38380

 

 

 

 

 

 

cII2002

t →c on the + strand at bp 38430

 

 

 

 

 

 

edit table

See Help:Gene_alleles for how to enter or edit alleles and phenotypes in EcoliWiki.

Notes

Genetic Resources

[back to top]


Resource Resource Type Source Notes/Reference
edit table

See Help:Gene_resources for help entering information into the Genetic Resources table.

Notes

Accessions in Other Databases

[back to top]


Database Accession Notes
edit table

See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Notes

Links

[back to top]


Name URL Comments
edit table

See Help:Links_table for how to enter or edit information in this section of EcoliWiki.

References

[back to top]


See Help:References for how to manage references in EcoliWiki.


Categories

Retrieved from "https://ecoliwiki.org/colipedia/index.php?title=Phage_lambda_cII:Gene&oldid=253164"