dfp:Quickview: Difference between revisions

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*  ** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. **  
*  ** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. **  
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!align=left {{table_heading_style}} |Gene Synonym(s)
!align=left {{table_heading_style}} |Gene Synonym(s)
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''ECK3629, b3639, JW5642, dnaS, coaBC''<ref name='LIB:Riley_2006'/>
''ECK3629, b3639, JW5642, dnaS, coaBC''<ref name='LIB:Riley_2006'/>, coaBC''
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!align=left {{table_heading_style}} |Product Desc.
!align=left {{table_heading_style}} |Product Desc.
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!align=left {{table_heading_style}} |Product Synonyms(s)
!align=left {{table_heading_style}} |Product Synonyms(s)
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fused 4'-phosphopantothenoylcysteine decarboxylase<ref name='LIB:Riley_2006'/>, phosphopantothenoylcysteine synthetase, FMN-binding<ref name='LIB:Riley_2006'/>, B3639<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, DnaS<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, Dfp<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
''fused 4'-phosphopantothenoylcysteine decarboxylase<ref name='LIB:Riley_2006'/>, phosphopantothenoylcysteine synthetase, FMN-binding<ref name='LIB:Riley_2006'/>, B3639<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, DnaS<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, Dfp<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , coaBC, ECK3629, JW5642, b3639''
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!align=left {{table_heading_style}} |Function from GO
!align=left {{table_heading_style}} |Function from GO
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!align=left {{table_heading_style}} |Quick Links
!align=left {{table_heading_style}} |Quick Links
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[http://porteco.org/AjaxSearch.jsp?searchString=dfp&s=search PortEco search(dfp)]&nbsp;&nbsp;&nbsp; [http://ecoliwiki.net/tools/display_dna.php?gene=dfp&loc=MG1655:3810754..3811974,W3110:3827684..3826464,REL606:3751086..3752306,DH10B:3908331..3909551,BW2952:3699080..3700300 DNA display]&nbsp;&nbsp;&nbsp; [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=3699080&end=3700300&gene=dfp&aa= Protein display]&nbsp;&nbsp;&nbsp; [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=dfp+AND+escherichia+coli Pubmed(dfp)]&nbsp;&nbsp;&nbsp; [http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=dfp Textpresso(dfp)]
[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=dfp&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=EG10004]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120000004&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=dfp&loc=MG1655%3A3810754..3811974,W3110%3A3827684..3826464,REL606%3A3751086..3752306,DH10B%3A3908331..3909551,BW2952%3A3699080..3700300]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=3699080&end=3700300&gene=dfp&aa=mkarqqkycdkianfwchptgkiimslagkkivlgvsggiaayktpelvrrlrdrgadvrvamteaakafitplslqavsgypvsdslldpaaeaamghielgkwadlvilapatadliarvaagmandlvsticlatpapvavlpamnqqmyraaatqhnlevlasrglliwgpdsgsqacgdigpgrmldpltivdmavahfspvndlkhlnimitagptrepldpvryisnhssgkmgfaiaaaaarrganvtlvsgpvslptppfvkrvdvmtalemeaavnasvqqqnifigcaavadyraatvapekikkqatqgdeltikmvknpdivagvaalkdhrpyvvgfaaetnnveeyarqkrirknldlicandvsqptqgfnsdnnalhlfwqdgdkvlplerkellgqllldeivtrydeknrr]]&nbsp;&nbsp; [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=dfp+AND+escherichia+coli]]&nbsp;&nbsp; [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=dfp]]&nbsp;&nbsp;


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Latest revision as of 21:51, 27 May 2013

{{#css:Suppresslinks.css}}<css>h1 .editsection { display:none;} h2 .editsection { display:none;}</css>

Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Standard Name

dfp

Gene Synonym(s)

ECK3629, b3639, JW5642, dnaS, coaBC[1], coaBC

Product Desc.

EG10004[2][3]

Coenzyme A biosynthesis, bifunctional enzyme; phosphopantothenoylcysteine decarboxylase (N) and phosphopantothenoylcysteine synthase (C)[4]

Product Synonyms(s)

fused 4'-phosphopantothenoylcysteine decarboxylase[1], phosphopantothenoylcysteine synthetase, FMN-binding[1], B3639[2][1], DnaS[2][1], Dfp[2][1] , coaBC, ECK3629, JW5642, b3639

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s):

Regulation/Activity
Quick Links



        

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See Help:Quickview for help with entering information in the Quickview table.

Notes

[back to top]


Dfp was originally identified as a flavoprotein affecting DNA synthesis and pantothenate metabolism. The N-terminal domain catalyzes the decarboxylation of (R)-4'-phospho-N-pantothenoylcysteine to 4'-phosphopantetheine.[4]


References

[back to top]


  1. ↑ 1.0 1.1 1.2 1.3 1.4 1.5 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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