ompF:Quickview: Difference between revisions
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* ** PLEASE DON'T EDIT THIS TABLE DIRECTLY. Use the edit table link under the table. ** | * ** PLEASE DON'T EDIT THIS TABLE DIRECTLY. Use the edit table link under the table. ** | ||
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{| id="L49aeeebe81dd3" class=" tableEdit New_Quickview_Table" | {| id="L49aeeebe81dd3" class=" tableEdit New_Quickview_Table" | ||
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!align=left {{table_heading_style}} |Gene Synonym(s) | !align=left {{table_heading_style}} |Gene Synonym(s) | ||
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''ECK0920, b0929, JW0912, cmlB, coa, cry, tolF, nfxB?''<ref name='LIB:Riley_2006'/><ref name='LIB:EcoCyc10.6'/> | ''ECK0920, b0929, JW0912, cmlB, coa, cry, tolF, nfxB?''<ref name='LIB:Riley_2006'/><ref name='LIB:EcoCyc10.6'/>, nfxB?'' | ||
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!align=left {{table_heading_style}} |Product Desc. | !align=left {{table_heading_style}} |Product Desc. | ||
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!align=left {{table_heading_style}} |Product Synonyms(s) | !align=left {{table_heading_style}} |Product Synonyms(s) | ||
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outer membrane porin 1a (Ia;b;F)<ref name='LIB:Riley_2006'/>, B0929<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, TolF<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, Cry<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, Coa<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, CmlB<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, OmpF<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, outer membrane porin OmpF<ref name='LIB:EcoCyc11.1'/><ref name='LIB:Riley_2006'/> | ''outer membrane porin 1a (Ia;b;F)<ref name='LIB:Riley_2006'/>, B0929<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, TolF<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, Cry<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, Coa<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, CmlB<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, OmpF<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, outer membrane porin OmpF<ref name='LIB:EcoCyc11.1'/><ref name='LIB:Riley_2006'/> , cmlB, coa, cry, ECK0920, JW0912, nfxB?, tolF, b0929'' | ||
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!align=left {{table_heading_style}} |Function from GO | !align=left {{table_heading_style}} |Function from GO | ||
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!align=left {{table_heading_style}} |Quick Links | !align=left {{table_heading_style}} |Quick Links | ||
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[http://porteco.org/AjaxSearch.jsp?searchString=ompF&s=search | [[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=ompF&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=EG10671]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120000664&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=ompF&loc=MG1655%3A986205..985117,W3110%3A987404..986316,DH10B%3A1040133..1039045,REL606%3A1004074..1002986,BW2952%3A888085..889173]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=888085&end=889173&gene=ompF&aa=mmkrnilavivpallvagtanaaeiynkdgnkvdlygkavglhyfskgngensyggngdmtyarlgfkgetqinsdltgygqweynfqgnnsegadaqtgnktrlafaglkyadvgsfdygrnygvvydalgytdmlpefggdtaysddffvgrvggvatyrnsnffglvdglnfavqylgknerdtarrsngdgvggsisyeyegfgivgaygaadrtnlqeaqplgngkkaeqwatglkydanniylaanygetrnatpitnkftntsgfanktqdvllvaqyqfdfglrpsiaytkskakdvegigdvdlvnyfevgatyyfnknmstyvdyiinqidsdnklgvgsddtvavgivyqf]] [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=ompF+AND+escherichia+coli]] [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=ompF]] | ||
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Latest revision as of 21:47, 27 May 2013
{{#css:Suppresslinks.css}}<css>h1 .editsection { display:none;} h2 .editsection { display:none;}</css>
| Quickview | Gene | Gene Product(s) | Expression | Evolution | On One Page |
| References | Suggestions |
| Standard Name |
ompF |
|---|---|
| Gene Synonym(s) |
ECK0920, b0929, JW0912, cmlB, coa, cry, tolF, nfxB?[1][2], nfxB? |
| Product Desc. |
outer membrane porin OmpF[2]; OmpF[3]; Component of outer membrane porin F[3]; The Colicin A Import System[3] Outer membrane porin F[4] |
| Product Synonyms(s) |
outer membrane porin 1a (Ia;b;F)[1], B0929[2][1], TolF[2][1], Cry[2][1], Coa[2][1], CmlB[2][1], OmpF[2][1], outer membrane porin OmpF[3][1] , cmlB, coa, cry, ECK0920, JW0912, nfxB?, tolF, b0929 |
| Function from GO |
<GO_nr /> |
| Knock-Out Phenotype | |
| Regulation/Expression | |
| Regulation/Activity | |
| Quick Links |
|
| edit table |
See Help:Quickview for help with entering information in the Quickview table.
Notes
Trimeric. T2 receptor. Colicin N receptor and translocator. Translation of OmpF is inhibited by the rseX sRNA. Binds TrxA (Kumar, 2004).[4]
Reduced levels of OmpF give multiple antibiotic resistance [5]
References
- ↑ 1.0 1.1 1.2 1.3 1.4 1.5 1.6 1.7 1.8 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
- ↑ 2.0 2.1 2.2 2.3 2.4 2.5 2.6 2.7 2.8 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ 3.0 3.1 3.2 3.3 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
- ↑ Delihas, N & Forst, S (2001) MicF: an antisense RNA gene involved in response of Escherichia coli to global stress factors. J. Mol. Biol. 313 1-12 PubMed