msbA:Gene Product(s): Difference between revisions

Standard name	MsbA fused lipid transporter subunits of ABC superfamily: membrane component^[1], ATP-binding component^[1], B0914^[2]^[1], MsbA^[2]^[1] ATP-binding transport protein^[2]^[3] Lipid exporter to the outer membrane; exports LPS, phospholipids, and lipid A; drug export and resistance; ABC transporter flippase; biogenesis of outer membrane; lipid-activated ATPase^[4]
Synonyms
Product description
EC number (for enzymes)
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Notes

Function

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Gene Ontology
See Help:Gene_ontology for help entering or editing GO terms and GO annotations in EcoliWiki.

Qualifier	GO ID	GO term name	Reference(s)	Evidence Code	with/from	Aspect	Notes	Status
GO:0005319 lipid transporter activity GOA:hamap GO_REF:0000020 IEA: Inferred from Electronic Annotation HAMAP:MF_01703 F Seeded from EcoCyc (v14.0)
GO:0005524 ATP binding GOA:interpro GO_REF:0000002 IEA: Inferred from Electronic Annotation InterPro:IPR001140 F Seeded from EcoCyc (v14.0)
GO:0005524 ATP binding GOA:interpro GO_REF:0000002 IEA: Inferred from Electronic Annotation InterPro:IPR003439 F Seeded from EcoCyc (v14.0)
GO:0005524 ATP binding GOA:interpro GO_REF:0000002 IEA: Inferred from Electronic Annotation InterPro:IPR011527 F Seeded from EcoCyc (v14.0)
GO:0005524 ATP binding GOA:interpro GO_REF:0000002 IEA: Inferred from Electronic Annotation InterPro:IPR011917 F Seeded from EcoCyc (v14.0)
GO:0005524 ATP binding GOA:interpro GO_REF:0000002 IEA: Inferred from Electronic Annotation InterPro:IPR017871 F Seeded from EcoCyc (v14.0)
GO:0005524 ATP binding GOA:spkw SP_KW:GO_REF:0000004 IEA: Inferred from Electronic Annotation SP_KW:KW-0067 F Seeded from EcoCyc (v14.0)
GO:0005886 plasma membrane GOA:spkw SP_KW:GO_REF:0000004 IEA: Inferred from Electronic Annotation SP_KW:KW-0997 C Seeded from EcoCyc (v14.0)
GO:0005886 plasma membrane GOA:spkw SP_KW:GO_REF:0000004 IEA: Inferred from Electronic Annotation SP_KW:KW-1003 C Seeded from EcoCyc (v14.0)
GO:0006869 lipid transport GOA:hamap GO_REF:0000020 IEA: Inferred from Electronic Annotation HAMAP:MF_01703 P Seeded from EcoCyc (v14.0)
GO:0006869 lipid transport GOA:interpro GO_REF:0000002 IEA: Inferred from Electronic Annotation InterPro:IPR011917 P Seeded from EcoCyc (v14.0)
GO:0006869 lipid transport GOA:spkw SP_KW:GO_REF:0000004 IEA: Inferred from Electronic Annotation SP_KW:KW-0445 P Seeded from EcoCyc (v14.0)
GO:0016020 membrane GOA:spkw SP_KW:GO_REF:0000004 IEA: Inferred from Electronic Annotation SP_KW:KW-0472 C Seeded from EcoCyc (v14.0)
GO:0016020 membrane PMID:16858726^[5] IDA: Inferred from Direct Assay C Seeded from EcoCyc (v14.0)
GO:0016021 integral to membrane GOA:interpro GO_REF:0000002 IEA: Inferred from Electronic Annotation InterPro:IPR001140 C Seeded from EcoCyc (v14.0)
GO:0016021 integral to membrane GOA:interpro GO_REF:0000002 IEA: Inferred from Electronic Annotation InterPro:IPR011527 C Seeded from EcoCyc (v14.0)
GO:0016021 integral to membrane GOA:interpro GO_REF:0000002 IEA: Inferred from Electronic Annotation InterPro:IPR011917 C Seeded from EcoCyc (v14.0)
GO:0005515 protein binding PMID:18344567^[6] IDA: Inferred from Direct Assay C complete
GO:0016021 integral to membrane GOA:spkw SP_KW:GO_REF:0000004 IEA: Inferred from Electronic Annotation SP_KW:KW-0812 C Seeded from EcoCyc (v14.0)
GO:0034040 lipid-transporting ATPase activity PMID:18344567^[6] IDA: Inferred from Direct Assay F complete
GO:0016021 integral to membrane GO_REF:0000023 IEA: Inferred from Electronic Annotation SP_SL:SL-9909 C Seeded from EcoCyc (v14.0)
GO:0008289 lipid binding PMID:18344567^[6] IDA: Inferred from Direct Assay F complete
GO:0055085 transmembrane transport GOA:interpro GO_REF:0000002 IEA: Inferred from Electronic Annotation InterPro:IPR001140 P Seeded from EcoCyc (v14.0)
GO:0008144 drug binding PMID:18344567^[6] IDA: Inferred from Direct Assay F complete
GO:0055085 transmembrane transport GOA:interpro GO_REF:0000002 IEA: Inferred from Electronic Annotation InterPro:IPR011527 P Seeded from EcoCyc (v14.0)
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Interactions See Help:Product_interactions for help entering or editing information about gene product interactions in this section of EcoliWiki.

Partner Type	Partner	Notes	References	Evidence
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Notes

Localization

See Help:Product_localization for how to add or edit information in this section of EcoliWiki.

Compartment

Description

Evidence

Source

Notes

plasma membrane C-terminus localized in the cytoplasm with 6 predicted transmembrane domains Daley et al. (2005) ^[7]

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Notes

Structure and Physical Properties

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Physical Properties See Help:Product_physical_properties for help entering or editing information about the physical properties of this gene product.

Sequence	at EcoCyc MHNDKDLSTW QTFRRLWPTI APFKAGLIVA GVALILNAAS DTFMLSLLKP LLDDGFGKTD RSVLVWMPLV VIGLMILRGI TSYVSSYCIS WVSGKVVMTM RRRLFGHMMG MPVSFFDKQS TGTLLSRITY DSEQVASSSS GALITVVREG ASIIGLFIMM FYYSWQLSII LIVLAPIVSI AIRVVSKRFR NISKNMQNTM GQVTTSAEQM LKGHKEVLIF GGQEVETKRF DKVSNRMRLQ GMKMVSASSI SDPIIQLIAS LALAFVLYAA SFPSVMDSLT AGTITVVFSS MIALMRPLKS LTNVNAQFQR GMAACQTLFT ILDSEQEKDE GKRVIERATG DVEFRNVTFT YPGRDVPALR NINLKIPAGK TVALVGRSGS GKSTIASLIT RFYDIDEGEI LMDGHDLREY TLASLRNQVA LVSQNVHLFN DTVANNIAYA RTEQYSREQI EEAARMAYAM DFINKMDNGL DTVIGENGVL LSGGQRQRIA IARALLRDSP ILILDEATSA LDTESERAIQ AALDELQKNR TSLVIAHRLS TIEKADEIVV VEDGVIVERG THNDLLEHRG VYAQLHKMQF GQ 582 64.462 kDa 8.8 (calculated) 46,870 - 47,120 (calc based on 13 Y, 5 W, and 2 C residues)
Length
Mol. Wt
pI
Extinction coefficient
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Domains/Motifs/Modification Sites

See Help:Product_domains_motifs for help entering or editing information in this section of EcoliWiki.

Type	Residues	Description	Notes	References
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<motif_map/>

Click the image to view raw output from TMHMM.

Structure
See Help:Product_structure for help entering or editing information in this section of EcoliWiki.

Structures

<beststructure> gene=msbA taxon=562,83333 </beststructure> View models at:

Models

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Structure figures

Notes

Gene Product Resources

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See Help:Product_resources for help with entering or editing information in this section of EcoliWiki.

Resource type	Source	Notes/Reference
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Notes

Accessions in Other Databases

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database	Accession	Notes
EcoCyc (EcoliWiki Page) EcoCyc:EG10613-MONOMER
UniProt (EcoliWiki Page) UniProt:P60752
PFAM (EcoliWiki Page) PFAM:PF00664
RefSeq (EcoliWiki Page) RefSeq:NP_415434
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Notes

Links

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Name	URL	Comments
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References

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See Help:References for how to manage references in EcoliWiki.

↑ ^1.0 ^1.1 ^1.2 ^1.3 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
↑ ^2.0 ^2.1 ^2.2 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
↑ EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
↑ Lasserre, JP et al. (2006) A complexomic study of Escherichia coli using two-dimensional blue native/SDS polyacrylamide gel electrophoresis. Electrophoresis 27 3306-21 PubMed
↑ ^6.0 ^6.1 ^6.2 ^6.3 Eckford, PD & Sharom, FJ (2008) Functional characterization of Escherichia coli MsbA: interaction with nucleotides and substrates. J. Biol. Chem. 283 12840-50 PubMed
↑ Daley, DO et al. (2005) Global topology analysis of the Escherichia coli inner membrane proteome. Science 308 1321-3 PubMed

msbA:Gene Product(s): Difference between revisions

Revision as of 23:06, 18 June 2010

Nomenclature

Notes

Function

Notes

Localization

Notes

Structure and Physical Properties

Structure figures

Notes

Gene Product Resources

Notes

Accessions in Other Databases

Notes

Links

References

Categories

Navigation menu

@@ Line 41: / Line 41: @@
 ||
 MsbA
+fused lipid transporter subunits of ABC superfamily: membrane component<ref name='LIB:Riley_2006'/>, ATP-binding component<ref name='LIB:Riley_2006'/>, B0914<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, MsbA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>
+ATP-binding transport protein<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>
+Lipid exporter to the outer membrane; exports LPS, phospholipids, and lipid A; drug export and resistance; ABC transporter flippase; biogenesis of outer membrane; lipid-activated ATPase<ref name='LIB:EcoGene'/>
 |-
 !align=left {{table heading style}} |Synonyms
 ||
-fused lipid transporter subunits of ABC superfamily: membrane component<ref name='LIB:Riley_2006'/>, ATP-binding component<ref name='LIB:Riley_2006'/>, B0914<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, MsbA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>
 |-
 !align=left {{table heading style}} |Product description
 ||
-ATP-binding transport protein<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>
-Lipid exporter to the outer membrane; exports LPS, phospholipids, and lipid A; drug export and resistance; ABC transporter flippase; biogenesis of outer membrane; lipid-activated ATPase<ref name='LIB:EcoGene'/>
 |-
 !align=left {{table heading style}} |EC number (for enzymes)
@@ Line 81: / Line 84: @@
 |
+GO:0005319
+lipid transporter activity
+GOA:hamap<br />GO_REF:0000020
+IEA: Inferred from Electronic Annotation
+HAMAP:MF_01703
+F
+Seeded from [[EcoCyc]] (v14.0)
 |
-GO:0005319
 |
-lipid transporter activity
 |
-GOA:hamap<br />GO_REF:0000020
 |
-IEA: Inferred from Electronic Annotation
 |
-HAMAP:MF_01703
 |
-F
 |
-Seeded from [[EcoCyc]] (v14.0)
 |
@@ Line 100: / Line 111: @@
 |
+GO:0005524
+ATP binding
+GOA:interpro<br />GO_REF:0000002
+IEA: Inferred from Electronic Annotation
+InterPro:IPR001140
+F
+Seeded from [[EcoCyc]] (v14.0)
 |
-GO:0005524
 |
-ATP binding
 |
-GOA:interpro<br />GO_REF:0000002
 |
-IEA: Inferred from Electronic Annotation
 |
-InterPro:IPR001140
 |
-F
 |
-Seeded from [[EcoCyc]] (v14.0)
 |
@@ Line 119: / Line 138: @@
 |
+GO:0005524
+ATP binding
+GOA:interpro<br />GO_REF:0000002
+IEA: Inferred from Electronic Annotation
+InterPro:IPR003439
+F
+Seeded from [[EcoCyc]] (v14.0)
 |
-GO:0005524
 |
-ATP binding
 |
-GOA:interpro<br />GO_REF:0000002
 |
-IEA: Inferred from Electronic Annotation
 |
-InterPro:IPR003439
 |
-F
 |
-Seeded from [[EcoCyc]] (v14.0)
 |
@@ Line 138: / Line 165: @@
 |
+GO:0005524
+ATP binding
+GOA:interpro<br />GO_REF:0000002
+IEA: Inferred from Electronic Annotation
+InterPro:IPR011527
+F
+Seeded from [[EcoCyc]] (v14.0)
 |
-GO:0005524
 |
-ATP binding
 |
-GOA:interpro<br />GO_REF:0000002
 |
-IEA: Inferred from Electronic Annotation
 |
-InterPro:IPR011527
 |
-F
 |
-Seeded from [[EcoCyc]] (v14.0)
 |
@@ Line 157: / Line 192: @@
 |
+GO:0005524
+ATP binding
+GOA:interpro<br />GO_REF:0000002
+IEA: Inferred from Electronic Annotation
+InterPro:IPR011917
+F
+Seeded from [[EcoCyc]] (v14.0)
 |
-GO:0005524
 |
-ATP binding
 |
-GOA:interpro<br />GO_REF:0000002
 |
-IEA: Inferred from Electronic Annotation
 |
-InterPro:IPR011917
 |
-F
 |
-Seeded from [[EcoCyc]] (v14.0)
 |
@@ Line 176: / Line 219: @@
 |
+GO:0005524
+ATP binding
+GOA:interpro<br />GO_REF:0000002
+IEA: Inferred from Electronic Annotation
+InterPro:IPR017871
+F
+Seeded from [[EcoCyc]] (v14.0)
 |
-GO:0005524
 |
-ATP binding
 |
-GOA:interpro<br />GO_REF:0000002
 |
-IEA: Inferred from Electronic Annotation
 |
-InterPro:IPR017871
 |
-F
 |
-Seeded from [[EcoCyc]] (v14.0)
 |
@@ Line 195: / Line 246: @@
 |
+GO:0005524
+ATP binding
+GOA:spkw<br />SP_KW:GO_REF:0000004
+IEA: Inferred from Electronic Annotation
+SP_KW:KW-0067
+F
+Seeded from [[EcoCyc]] (v14.0)
 |
-GO:0005524
 |
-ATP binding
 |
-GOA:spkw<br />SP_KW:GO_REF:0000004
 |
-IEA: Inferred from Electronic Annotation
 |
-SP_KW:KW-0067
 |
-F
 |
-Seeded from [[EcoCyc]] (v14.0)
 |
@@ Line 214: / Line 273: @@
 |
+GO:0005886
+plasma membrane
+GOA:spkw<br />SP_KW:GO_REF:0000004
+IEA: Inferred from Electronic Annotation
+SP_KW:KW-0997
+C
+Seeded from [[EcoCyc]] (v14.0)
 |
-GO:0005886
 |
-plasma membrane
 |
-GOA:spkw<br />SP_KW:GO_REF:0000004
 |
-IEA: Inferred from Electronic Annotation
 |
-SP_KW:KW-0997
 |
-C
 |
-Seeded from [[EcoCyc]] (v14.0)
 |
@@ Line 233: / Line 300: @@
 |
+GO:0005886
+plasma membrane
+GOA:spkw<br />SP_KW:GO_REF:0000004
+IEA: Inferred from Electronic Annotation
+SP_KW:KW-1003
+C
+Seeded from [[EcoCyc]] (v14.0)
 |
-GO:0005886
 |
-plasma membrane
 |
-GOA:spkw<br />SP_KW:GO_REF:0000004
 |
-IEA: Inferred from Electronic Annotation
 |
-SP_KW:KW-1003
 |
-C
 |
-Seeded from [[EcoCyc]] (v14.0)
 |
@@ Line 252: / Line 327: @@
 |
+GO:0006869
+lipid transport
+GOA:hamap<br />GO_REF:0000020
+IEA: Inferred from Electronic Annotation
+HAMAP:MF_01703
+P
+Seeded from [[EcoCyc]] (v14.0)
 |
-GO:0006869
 |
-lipid transport
 |
-GOA:hamap<br />GO_REF:0000020
 |
-IEA: Inferred from Electronic Annotation
 |
-HAMAP:MF_01703
 |
-P
 |
-Seeded from [[EcoCyc]] (v14.0)
 |
@@ Line 271: / Line 354: @@
 |
+GO:0006869
+lipid transport
+GOA:interpro<br />GO_REF:0000002
+IEA: Inferred from Electronic Annotation
+InterPro:IPR011917
+P
+Seeded from [[EcoCyc]] (v14.0)
 |
-GO:0006869
 |
-lipid transport
 |
-GOA:interpro<br />GO_REF:0000002
 |
-IEA: Inferred from Electronic Annotation
 |
-InterPro:IPR011917
 |
-P
 |
-Seeded from [[EcoCyc]] (v14.0)
 |
@@ Line 290: / Line 381: @@
 |
+GO:0006869
+lipid transport
+GOA:spkw<br />SP_KW:GO_REF:0000004
+IEA: Inferred from Electronic Annotation
+SP_KW:KW-0445
+P
+Seeded from [[EcoCyc]] (v14.0)
 |
-GO:0006869
 |
-lipid transport
 |
-GOA:spkw<br />SP_KW:GO_REF:0000004
 |
-IEA: Inferred from Electronic Annotation
 |
-SP_KW:KW-0445
 |
-P
 |
-Seeded from [[EcoCyc]] (v14.0)
 |
@@ Line 309: / Line 408: @@
 |
+GO:0016020
+membrane
+GOA:spkw<br />SP_KW:GO_REF:0000004
+IEA: Inferred from Electronic Annotation
+SP_KW:KW-0472
+C
+Seeded from [[EcoCyc]] (v14.0)
 |
-GO:0016020
 |
-membrane
 |
-GOA:spkw<br />SP_KW:GO_REF:0000004
 |
-IEA: Inferred from Electronic Annotation
 |
-SP_KW:KW-0472
 |
-C
 |
-Seeded from [[EcoCyc]] (v14.0)
 |
@@ Line 328: / Line 435: @@
 |
+GO:0016020
+membrane
+PMID:16858726
+IDA: Inferred from Direct Assay
+C
+Seeded from [[EcoCyc]] (v14.0)
 |
-GO:0016020
 |
-membrane
 |
-PMID:16858726
 |
-IDA: Inferred from Direct Assay
 |
 |
-C
 |
-Seeded from [[EcoCyc]] (v14.0)
 |
@@ Line 347: / Line 462: @@
 |
+GO:0016021
+integral to membrane
+GOA:interpro<br />GO_REF:0000002
+IEA: Inferred from Electronic Annotation
+InterPro:IPR001140
+C
+Seeded from [[EcoCyc]] (v14.0)
 |
-GO:0016021
 |
-integral to membrane
 |
-GOA:interpro<br />GO_REF:0000002
 |
-IEA: Inferred from Electronic Annotation
 |
-InterPro:IPR001140
 |
-C
 |
-Seeded from [[EcoCyc]] (v14.0)
 |
@@ Line 366: / Line 489: @@
 |
+GO:0016021
+integral to membrane
+GOA:interpro<br />GO_REF:0000002
+IEA: Inferred from Electronic Annotation
+InterPro:IPR011527
+C
+Seeded from [[EcoCyc]] (v14.0)
 |
-GO:0016021
 |
-integral to membrane
 |
-GOA:interpro<br />GO_REF:0000002
 |
-IEA: Inferred from Electronic Annotation
 |
-InterPro:IPR011527
 |
-C
 |
-Seeded from [[EcoCyc]] (v14.0)
 |
@@ Line 385: / Line 516: @@
 |
+GO:0016021
+integral to membrane
+GOA:interpro<br />GO_REF:0000002
+IEA: Inferred from Electronic Annotation
+InterPro:IPR011917
+C
+Seeded from [[EcoCyc]] (v14.0)
 |
-GO:0016021
 |
-integral to membrane
 |
-GOA:interpro<br />GO_REF:0000002
 |
-IEA: Inferred from Electronic Annotation
 |
-InterPro:IPR011917
 |
-C
 |
-Seeded from [[EcoCyc]] (v14.0)
 |
@@ Line 404: / Line 543: @@
 |
+GO:0005515
+protein binding
+PMID:18344567
+IDA: Inferred from Direct Assay
+C
+complete
 |
-GO:0005515
 |
-protein binding
 |
-PMID:18344567
 |
-IDA: Inferred from Direct Assay
 |
 |
-C
 |
 |
-complete
 |-
 |
+GO:0016021
+integral to membrane
+GOA:spkw<br />SP_KW:GO_REF:0000004
+IEA: Inferred from Electronic Annotation
+SP_KW:KW-0812
+C
+Seeded from [[EcoCyc]] (v14.0)
 |
-GO:0016021
 |
-integral to membrane
 |
-GOA:spkw<br />SP_KW:GO_REF:0000004
 |
-IEA: Inferred from Electronic Annotation
 |
-SP_KW:KW-0812
 |
-C
 |
-Seeded from [[EcoCyc]] (v14.0)
 |
@@ Line 442: / Line 597: @@
 |
+GO:0034040
+lipid-transporting ATPase activity
+PMID:18344567
+IDA: Inferred from Direct Assay
+F
+complete
 |
-GO:0034040
 |
-lipid-transporting ATPase activity
 |
-PMID:18344567
 |
-IDA: Inferred from Direct Assay
 |
 |
-F
 |
 |
-complete
 |-
 |
+GO:0016021
+integral to membrane
+GO_REF:0000023
+IEA: Inferred from Electronic Annotation
+SP_SL:SL-9909
+C
+Seeded from [[EcoCyc]] (v14.0)
 |
-GO:0016021
 |
-integral to membrane
 |
-GO_REF:0000023
 |
-IEA: Inferred from Electronic Annotation
 |
-SP_SL:SL-9909
 |
-C
 |
-Seeded from [[EcoCyc]] (v14.0)
 |
@@ Line 480: / Line 651: @@
 |
+GO:0008289
+lipid binding
+PMID:18344567
+IDA: Inferred from Direct Assay
+F
+complete
 |
-GO:0008289
 |
-lipid binding
 |
-PMID:18344567
 |
-IDA: Inferred from Direct Assay
 |
 |
-F
 |
 |
-complete
 |-
 |
+GO:0055085
+transmembrane transport
+GOA:interpro<br />GO_REF:0000002
+IEA: Inferred from Electronic Annotation
+InterPro:IPR001140
+P
+Seeded from [[EcoCyc]] (v14.0)
 |
-GO:0055085
 |
-transmembrane transport
 |
-GOA:interpro<br />GO_REF:0000002
 |
-IEA: Inferred from Electronic Annotation
 |
-InterPro:IPR001140
 |
-P
 |
-Seeded from [[EcoCyc]] (v14.0)
 |
@@ Line 518: / Line 705: @@
 |
+GO:0008144
+drug binding
+PMID:18344567
+IDA: Inferred from Direct Assay
+F
+complete
 |
-GO:0008144
 |
-drug binding
 |
-PMID:18344567
 |
-IDA: Inferred from Direct Assay
 |
 |
-F
 |
 |
-complete
 |-
 |
+GO:0055085
+transmembrane transport
+GOA:interpro<br />GO_REF:0000002
+IEA: Inferred from Electronic Annotation
+InterPro:IPR011527
+P
+Seeded from [[EcoCyc]] (v14.0)
 |
-GO:0055085
 |
-transmembrane transport
 |
-GOA:interpro<br />GO_REF:0000002
 |
-IEA: Inferred from Electronic Annotation
 |
-InterPro:IPR011527
 |
-P
 |
-Seeded from [[EcoCyc]] (v14.0)
 |
@@ Line 594: / Line 797: @@
 |
 plasma membrane
+C-terminus localized in the cytoplasm with 6 predicted transmembrane domains
+Daley et al. (2005) <ref name=PMID:15919996/>
 |
-C-terminus localized in the cytoplasm with 6 predicted transmembrane domains
 |
-Daley et al. (2005) <ref name=PMID:15919996/>
 |
 |
@@ Line 640: / Line 847: @@
 LSGGQRQRIA IARALLRDSP ILILDEATSA LDTESERAIQ AALDELQKNR TSLVIAHRLS
 TIEKADEIVV VEDGVIVERG THNDLLEHRG VYAQLHKMQF GQ</pre>
+.462 kDa
+.8 (calculated)
+,870 - 47,120 (calc based on 13 Y, 5 W, and 2 C residues)
 |-
 !align=left {{table heading style}} |Length
 ||
 |-
 !align=left {{table heading style}} |Mol. Wt
 ||
-.462 kDa
 |-
 !align=left {{table heading style}} |pI
 ||
-.8 (calculated)
 |-
 !align=left {{table heading style}} |Extinction coefficient
 ||
-,870 - 47,120 (calc based on 13 Y, 5 W, and 2 C residues)
 |- class="tableEdit_footer"
@@ Line 712: / Line 923: @@
 taxon=562,83333
 </beststructure>
-|-
-!align=left {{table heading style}} |Models
-||
 View models at:
 * [http://dragon.bio.purdue.edu/ecolpredict2/localsearch/cgi-bin/search3.cgi?q=recA EcoliPredict]
@@ Line 721: / Line 929: @@
 * [http://www.ebi.ac.uk/msd-srv/pqs/ Protein Quaternary Structure] (PQS)
 * [http://spock.genes.nig.ac.jp/~genome/search.html Genomes TO Protein] (GTOP)
+|-
+!align=left {{table heading style}} |Models
+||
 |- class="tableEdit_footer"
@@ Line 789: / Line 1,001: @@
 |
 [http://ecocyc.org EcoCyc] ([[EcoCyc|EcoliWiki Page]])
+[http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=EG10613-MONOMER EcoCyc:EG10613-MONOMER]
 |
-[http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=EG10613-MONOMER EcoCyc:EG10613-MONOMER]
 |
@@ Line 796: / Line 1,010: @@
 |
 [http://uniprot.org/ UniProt] ([[UniProt|EcoliWiki Page]])
+[[uniprot:P60752|UniProt:P60752]]
 |
-[[uniprot:P60752|UniProt:P60752]]
 |
@@ Line 803: / Line 1,019: @@
 |
 [http://pfam.sanger.ac.uk/ PFAM] ([[PFAM|EcoliWiki Page]])
+[http://pfam.sanger.ac.uk/family?acc=PF00664 PFAM:PF00664]
 |
-[http://pfam.sanger.ac.uk/family?acc=PF00664 PFAM:PF00664]
 |
@@ Line 810: / Line 1,028: @@
 |
 [http://www.ncbi.nlm.nih.gov/RefSeq/ RefSeq] ([[RefSeq|EcoliWiki Page]])
+[http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?db=nucleotide&val=NP_415434 RefSeq:NP_415434]
 |
-[http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?db=nucleotide&val=NP_415434 RefSeq:NP_415434]
 |

msbA:Gene Product(s): Difference between revisions

Revision as of 23:06, 18 June 2010

Nomenclature

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