mhpF:Gene Product(s): Difference between revisions
touch the Product_motif_table table. |
Kbguillory (talk | contribs) Table edited by Kbguillory via TableEdit |
||
| Line 306: | Line 306: | ||
| | | | ||
required fields missing | required fields missing | ||
|- | |||
| | |||
| | |||
GO:0005515 | |||
| | |||
protein binding | |||
| | |||
PMID:16782065 | |||
| | |||
IDA: Inferred from Direct Assay | |||
| | |||
| | |||
C | |||
| | |||
| | |||
complete | |||
|- | |||
| | |||
| | |||
GO:0008774 | |||
| | |||
acetaldehyde dehydrogenase (acetylating) activity | |||
| | |||
PMID:9098055 | |||
| | |||
IDA: Inferred from Direct Assay | |||
| | |||
| | |||
F | |||
| | |||
| | |||
complete | |||
|- class="tableEdit_footer" | |- class="tableEdit_footer" | ||
Revision as of 22:48, 3 May 2010
{{#css:Suppresslinks.css}}<css>h1 .editsection { display:none;} h2 .editsection { display:none;}</css>
| Quickview | Gene | Gene Product(s) | Expression | Evolution | On One Page |
| Nomenclature | Function | Interactions | Localization | Sequence | Domains | Structure | Resources | Accessions | Links | References | Suggestions |
Nomenclature
See Help:Product_nomenclature for help entering or editing information in this section of EcoliWiki.
| Standard name |
MhpF |
|---|---|
| Synonyms |
acetaldehyde-CoA dehydrogenase II, NAD-binding[1], B0351[2][1], MhpF[2][1] |
| Product description |
acetaldehyde dehydrogenase 2[2][3] Acetaldehyde dehydrogenase, acylating; utilizes MHP[4] |
| EC number (for enzymes) | |
| edit table |
Notes
Function
Gene Ontology
See Help:Gene_ontology for help entering or editing GO terms and GO annotations in EcoliWiki.
| Qualifier | GO ID | GO term name | Reference(s) | Evidence Code | with/from | Aspect | Notes | Status |
|---|---|---|---|---|---|---|---|---|
| GO:0005737 |
cytoplasm |
IEA: Inferred from Electronic Annotation |
C |
Seeded from EcoCyc [5] |
complete | |||
| GO:0006520 |
amino acid metabolic process |
IEA: Inferred from Electronic Annotation |
P |
Seeded from EcoCyc [5] |
complete | |||
| GO:0008774 |
acetaldehyde dehydrogenase (acetylating) activity |
IEA: Inferred from Electronic Annotation |
F |
Seeded from EcoCyc 12.5 [6] |
complete | |||
| GO:0016491 |
oxidoreductase activity |
IEA: Inferred from Electronic Annotation |
F |
Seeded from EcoCyc [5] |
complete | |||
| GO:0016620 |
oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor |
IEA: Inferred from Electronic Annotation |
F |
Seeded from EcoCyc [5] |
complete | |||
| GO:0019439 |
aromatic compound catabolic process |
IEA: Inferred from Electronic Annotation |
P |
Seeded from EcoCyc 12.5 [6] |
complete | |||
| GO:0051287 |
NAD or NADH binding |
IEA: Inferred from Electronic Annotation |
F |
Seeded from EcoCyc [5] |
complete | |||
| GO:0003824 |
catalytic activity |
IEA: Inferred from Electronic Annotation |
F |
Seeded from EcoCyc [5] |
complete | |||
| GO:0005488 |
binding |
IEA: Inferred from Electronic Annotation |
F |
Seeded from EcoCyc [5] |
complete | |||
| GO:0008152 |
metabolic process |
IEA: Inferred from Electronic Annotation |
P |
Seeded from EcoCyc [5] |
complete | |||
| GO:0055114 |
oxidation reduction |
IEA: Inferred from Electronic Annotation |
P |
Seeded from EcoCyc [5] |
complete | |||
| GO:0019395 |
fatty acid oxidation |
P |
Seeded from EcoCyc 11.1[3]. |
required fields missing | ||||
| GO:0005515 |
protein binding |
IDA: Inferred from Direct Assay |
C |
complete | ||||
| GO:0008774 |
acetaldehyde dehydrogenase (acetylating) activity |
IDA: Inferred from Direct Assay |
F |
complete | ||||
| edit table |
Interactions See Help:Product_interactions for help entering or editing information about gene product interactions in this section of EcoliWiki.
| Partner Type | Partner | Notes | References | Evidence |
|---|---|---|---|---|
|
Protein |
dnaK |
Experiment(s):EBI-1136338 | ||
|
Protein |
glpD |
Experiment(s):EBI-1136338 | ||
|
Protein |
nadE |
Experiment(s):EBI-1136338 | ||
| edit table |
Notes
Localization
See Help:Product_localization for how to add or edit information in this section of EcoliWiki.
| Compartment | Description | Evidence | Source | Notes |
|---|---|---|---|---|
| edit table |
Notes
Structure and Physical Properties
Physical Properties See Help:Product_physical_properties for help entering or editing information about the physical properties of this gene product.
| Sequence |
MSKRKVAIIG SGNIGTDLMI KILRHGQHLE MAVMVGIDPQ SDGLARARRM GVATTHEGVI GLMNMPEFAD IDIVFDATSA GAHVKNDAAL REAKPDIRLI DLTPAAIGPY CVPVVNLEAN VDQLNVNMVT CGGQATIPMV AAVSRVARVH YAEIIASIAS KSAGPGTRAN IDEFTETTSR AIEVVGGAAK GKAIIVLNPA EPPLMMRDTV YVLSDEASQD DIEASINEMA EAVQAYVPGY RLKQRVQFEV IPQDKPVNLP GVGQFSGLKT AVWLEVEGAA HYLPAYAGNL DIMTSSALAT AEKMAQSLAR KAGEAA |
|---|---|
| Length |
316 |
| Mol. Wt |
33.442 kDa |
| pI |
5.3 (calculated) |
| Extinction coefficient |
15,930 - 16,180 (calc based on 7 Y, 1 W, and 2 C residues) |
| edit table |
Domains/Motifs/Modification Sites
|
See Help:Product_domains_motifs for help entering or editing information in this section of EcoliWiki.
|
<motif_map/> |
|
Structure
|
Structure figures
Notes
Gene Product Resources
See Help:Product_resources for help with entering or editing information in this section of EcoliWiki.
| Resource type | Source | Notes/Reference |
|---|---|---|
| edit table |
Notes
Accessions in Other Databases
See Help:Gene_accessions for help with entering information into the Gene Accessions table.
| Database | Accession | Notes |
|---|---|---|
|
| ||
| edit table |
Notes
Links
| Name | URL | Comments |
|---|---|---|
| edit table |
References
See Help:References for how to manage references in EcoliWiki.
- ↑ 1.0 1.1 1.2 1.3 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
- ↑ 2.0 2.1 2.2 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ 3.0 3.1 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
- ↑ 5.0 5.1 5.2 5.3 5.4 5.5 5.6 5.7 5.8 EcoCyc (release 13.0; 2009) Keseler, IM et al. (2009) Nucleic Acids Res. 37(Database issue):D464-70
- ↑ 6.0 6.1 EcoCyc (release 12.5; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ Lee, SJ et al. (2006) Coupled expression of MhpE aldolase and MhpF dehydrogenase in Escherichia coli. Biochem. Biophys. Res. Commun. 346 1009-15 PubMed
- ↑ Ferrández, A et al. (1997) Genetic characterization and expression in heterologous hosts of the 3-(3-hydroxyphenyl)propionate catabolic pathway of Escherichia coli K-12. J. Bacteriol. 179 2573-81 PubMed
- ↑ 9.0 9.1 9.2 Arifuzzaman, M et al. (2006) Large-scale identification of protein-protein interaction of Escherichia coli K-12. Genome Res. 16 686-91 PubMed
Categories
- GO:0005737 ! cytoplasm
- GO:0006520 ! cellular amino acid metabolic process
- GO:0008774 ! acetaldehyde dehydrogenase (acetylating) activity
- GO:0016491 ! oxidoreductase activity
- GO:0016620 ! oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor
- GO:0019439 ! aromatic compound catabolic process
- GO:0051287 ! NAD binding
- GO:0003824 ! catalytic activity
- GO:0005488 ! binding
- GO:0008152 ! metabolic process
- GO:0055114 ! oxidation-reduction process
- GO:0019395 ! fatty acid oxidation
- GO:0005515 ! protein binding
- Proteins