argK:Gene Product(s): Difference between revisions

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|-
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!align=left |Standard name
!align=left {{table heading style}} |Standard name
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ArgK  
ArgK  
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!align=left |Synonyms
!align=left {{table heading style}} |Synonyms
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membrane ATPase/protein kinase<ref name='LIB:Riley_2006'/>, B2918<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YgfD<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, ArgK<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
membrane ATPase/protein kinase<ref name='LIB:Riley_2006'/>, B2918<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YgfD<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, ArgK<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
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!align=left |Product description
!align=left {{table heading style}} |Product description
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arginine transport ATPase<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>
arginine transport ATPase<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>
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Required to convert succinate to propionate, Arg transport?; reported to have ATPase and protein kinase activity<ref name='LIB:EcoGene'/>
Required to convert succinate to propionate, Arg transport?; reported to have ATPase and protein kinase activity<ref name='LIB:EcoGene'/>
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!align=left |EC number (for enzymes)
!align=left {{table heading style}} |EC number (for enzymes)
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{|  id="V46aac6df55cd9"  class=" tableEdit GO_table_product dataTable"   
{|  id="V46aac6df55cd9"  class=" tableEdit GO_table_product dataTable"   
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|- {{table_heading_style}}
!|Qualifier!!GO ID!!GO term name!!Reference(s)!!Evidence Code!!with/from!!Aspect!!Notes!!Status
!|Qualifier!!GO ID!!GO term name!!Reference(s)!!Evidence Code!!with/from!!Aspect!!Notes!!Status
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{|  id="O46aac6e2bb876"  class=" tableEdit Product_interactions_table dataTable"   
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!|Partner Type!!Partner!!Notes!!References!!Evidence
!|Partner Type!!Partner!!Notes!!References!!Evidence
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{|  id="H46aac6e383cae"  class=" tableEdit Product_localization_table"   
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!|Compartment!!Description!!Evidence!!Source!!Notes
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|-
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!align=left |Sequence
!align=left {{table heading style}} |Sequence
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[http://biocyc.org/ECOLI/sequence-aa?object=EG11445-MONOMER at EcoCyc]  
[http://biocyc.org/ECOLI/sequence-aa?object=EG11445-MONOMER at EcoCyc]  
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RQTLLAVKNN TLSPRTGLRQ LSEFIQTQYF D</pre>  
RQTLLAVKNN TLSPRTGLRQ LSEFIQTQYF D</pre>  
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!align=left |Length
!align=left {{table heading style}} |Length
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331
331
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!align=left |Mol. Wt
!align=left {{table heading style}} |Mol. Wt
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36.704 kDa
36.704 kDa
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!align=left |pI
!align=left {{table heading style}} |pI
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6.5 (calculated)
6.5 (calculated)
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!align=left |Extinction coefficient
!align=left {{table heading style}} |Extinction coefficient
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26,930 - 27,430 (calc based on 7 Y, 3 W, and 4 C residues)
26,930 - 27,430 (calc based on 7 Y, 3 W, and 4 C residues)
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{|  id="Y46aac6e594db0"  class=" tableEdit Product_motif_table"   
{|  id="Y46aac6e594db0"  class=" tableEdit Product_motif_table dataTable"   
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!|Type!!Residues!!Description!!Notes
!|Type!!Residues!!Description!!Notes!!References


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|-
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!align=left |Structures
!align=left {{table heading style}} |Structures
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<beststructure>
<beststructure>
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</beststructure>
</beststructure>
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!align=left |Models
!align=left {{table heading style}} |Models
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View models at:
View models at:
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{|  id="E46aac6e6601ff"  class=" tableEdit Product_resource_table"   
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!|Resource type!!Source!!Notes/Reference
!|Resource type!!Source!!Notes/Reference


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!|Database!!Accession!!Notes
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!|Name!!URL!!Comments
!|Name!!URL!!Comments


Revision as of 19:23, 23 February 2010

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
Nomenclature Function Interactions Localization Sequence Domains Structure Resources Accessions Links References Suggestions

Nomenclature

See Help:Product_nomenclature for help entering or editing information in this section of EcoliWiki.

Standard name

ArgK

Synonyms

membrane ATPase/protein kinase[1], B2918[2][1], YgfD[2][1], ArgK[2][1]

Product description

arginine transport ATPase[2][3]

Required to convert succinate to propionate, Arg transport?; reported to have ATPase and protein kinase activity[4]

EC number (for enzymes)


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Notes

Function

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Gene Ontology
See Help:Gene_ontology for help entering or editing GO terms and GO annotations in EcoliWiki.

Qualifier GO ID GO term name Reference(s) Evidence Code with/from Aspect Notes Status
GO:0000166

nucleotide binding

GO_REF:0000004

IEA: Inferred from Electronic Annotation

SP_KW:KW-0547

F

Seeded from EcoCyc [5]

complete

GO:0005524

ATP binding

GO_REF:0000004

IEA: Inferred from Electronic Annotation

SP_KW:KW-0067

F

Seeded from EcoCyc [5]

complete

GO:0006810

transport

GO_REF:0000004

IEA: Inferred from Electronic Annotation

SP_KW:KW-0813

P

Seeded from EcoCyc [5]

complete

GO:0016020

membrane

GO_REF:0000004
GO_REF:0000004

IEA: Inferred from Electronic Annotation

SP_KW:KW-0397
SP_KW:KW-0472

C

Seeded from EcoCyc 12.5 [6]

complete

GO:0016301

kinase activity

GO_REF:0000004

IEA: Inferred from Electronic Annotation

SP_KW:KW-0418

F

Seeded from EcoCyc [5]

complete

GO:0016740

transferase activity

GO_REF:0000004

IEA: Inferred from Electronic Annotation

SP_KW:KW-0808

F

Seeded from EcoCyc [5]

complete

GO:0003924

GTPase activity

PMID:18950999[7]

IDA: Inferred from Direct Assay

F

Seeded from EcoCyc [5]

complete

GO:0005515

protein binding

PMID:18950999[7]

IDA: Inferred from Direct Assay

UniProtKB:P27253

F

Seeded from EcoCyc [5]

complete

GO:0005886

plasma membrane

GO_REF:0000004
GO_REF:0000004
GO_REF:0000023

IEA: Inferred from Electronic Annotation

SP_KW:KW-0997
SP_KW:KW-1003
SP_SL:SL-0037

C

Seeded from EcoCyc [5]

complete

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Interactions See Help:Product_interactions for help entering or editing information about gene product interactions in this section of EcoliWiki.

Partner Type Partner Notes References Evidence

Protein

rplB

PMID:16606699[8]

Experiment(s):EBI-1144302

Protein

yphE

PMID:16606699[8]

Experiment(s):EBI-1144302

Protein

serA

PMID:16606699[8]

Experiment(s):EBI-1144302

Protein

groL

PMID:16606699[8]

Experiment(s):EBI-1144302
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Notes

Localization

See Help:Product_localization for how to add or edit information in this section of EcoliWiki.

Compartment Description Evidence Source Notes

cytoplasm


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Notes

Structure and Physical Properties

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Physical Properties See Help:Product_physical_properties for help entering or editing information about the physical properties of this gene product.

Sequence

at EcoCyc 

MINEATLAES IRRLRQGERA TLAQAMTLVE SRHPRHQALS TQLLDAIMPY CGNTLRLGVT
GTPGAGKSTF LEAFGMLLIR EGLKVAVIAV DPSSPVTGGS ILGDKTRMND LARAEAAFIR
PVPSSGHLGG ASQRARELML LCEAAGYDVV IVETVGVGQS ETEVARMVDC FISLQIAGGG
DDLQGIKKGL MEVADLIVIN KDDGDNHTNV AIARHMYESA LHILRRKYDE WQPRVLTCSA
LEKRGIDEIW HAIIDFKTAL TASGRLQQVR QQQSVEWLRK QTEEEVLNHL FANEDFDRYY
RQTLLAVKNN TLSPRTGLRQ LSEFIQTQYF D
Length

331

Mol. Wt

36.704 kDa

pI

6.5 (calculated)

Extinction coefficient

26,930 - 27,430 (calc based on 7 Y, 3 W, and 4 C residues)

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Domains/Motifs/Modification Sites

See Help:Product_domains_motifs for help entering or editing information in this section of EcoliWiki.

Type Residues Description Notes References
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<motif_map/>

Structure
See Help:Product_structure for help entering or editing information in this section of EcoliWiki.

Structures

<beststructure> gene=argK taxon=562,83333 </beststructure>

Models

View models at:

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Structure figures

Notes

Gene Product Resources

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See Help:Product_resources for help with entering or editing information in this section of EcoliWiki.

Resource type Source Notes/Reference
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Notes

Accessions in Other Databases

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

EcoCyc (EcoliWiki Page)

EcoCyc:EG11445-MONOMER

UniProt (EcoliWiki Page)

UniProt:P27254

PFAM (EcoliWiki Page)

PFAM:PF03308

RefSeq (EcoliWiki Page)

RefSeq:NP_417393


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Notes

Links

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References

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See Help:References for how to manage references in EcoliWiki.

  1. ↑ 1.0 1.1 1.2 1.3 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
  5. ↑ 5.0 5.1 5.2 5.3 5.4 5.5 5.6 5.7 EcoCyc (release 13.0; 2009) Keseler, IM et al. (2009) Nucleic Acids Res. 37(Database issue):D464-70
  6. ↑ EcoCyc (release 12.5; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  7. ↑ 7.0 7.1 Froese, DS et al. (2009) Sleeping beauty mutase (sbm) is expressed and interacts with ygfd in Escherichia coli. Microbiol. Res. 164 1-8 PubMed
  8. ↑ 8.0 8.1 8.2 8.3 Arifuzzaman, M et al. (2006) Large-scale identification of protein-protein interaction of Escherichia coli K-12. Genome Res. 16 686-91 PubMed

Categories

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