kefA:Quickview: Difference between revisions

From EcoliWiki
Jump to navigation Jump to search
update QV table
update QV table
Line 47: Line 47:
!align=left {{table_heading_style}} |Function from GO
!align=left {{table_heading_style}} |Function from GO
||
||
'''Molecular Function'''
<GO_nr />
* GO:0008381 mechanically-gated ion channel activity ([http://www.geneontology.org/GO.evidence.shtml IGI])
'''Biological Process'''
* GO:0009992 cellular water homeostasis ([http://www.geneontology.org/GO.evidence.shtml IMP])
 
|-
|-
!align=left {{table_heading_style}} |Knock-Out Phenotype
!align=left {{table_heading_style}} |Knock-Out Phenotype

Revision as of 19:36, 2 February 2010

{{#css:Suppresslinks.css}}<css>h1 .editsection { display:none;} h2 .editsection { display:none;}</css>

Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions

See Help:Quickview for help with entering information in the Quickview table.

Standard Name

kefA

Gene Synonym(s)

ECK0459, b0465, JW0454, aefA, mscK[1]

Product Desc.

KefA[2][3]

Mechanosensitive channel protein, intermediate conductance; regulation of ion balance and turgor pressure at high osmolarity; also may affect activity of mechanosensitive channel MscS[4]

Product Synonyms(s)

fused conserved protein[1], mechanosensitive channel protein[1], B0465[2][1], MscK[2][1], KefA[2][1], AefA[2][1]

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): kefA[2]

Regulation/Activity
Quick Links

DNA display    Protein display    Pubmed(kefA)    Textpresso(kefA)

See Help:Quickview for help with entering information in the Quickview table.

Notes

[back to top]


Consistently co-purifies with the degradosome. Probable false positive lipoprotein prediction, 12 CM TMs, Cys not conserved. First 33 aa are predicted to be a type I signal peptide; the first 40 aa enable export of a fusion protein into the periplasm (McLaggan, 2002). mscS, kefA, yjeP, ybiO, ybdG and ynaI are paralogs.[4]



References

[back to top]


  1. ↑ 1.0 1.1 1.2 1.3 1.4 1.5 1.6 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 2.5 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.