glnB:Quickview: Difference between revisions

From EcoliWiki
Jump to navigation Jump to search
← Older editNewer edit →
Update TableEdit tables.
update QV table
Line 27: Line 27:


|-
|-
!align=left |Standard Name
!align=left {{table_heading_style}} |Standard Name
||
||
''glnB''  
''glnB''  
|-
|-
!align=left |Gene Synonym(s)
!align=left {{table_heading_style}} |Gene Synonym(s)
||
||
''ECK2550, b2553, JW2537''<ref name='LIB:Riley_2006'/>
''ECK2550, b2553, JW2537''<ref name='LIB:Riley_2006'/>
|-
|-
!align=left |Product Desc.
!align=left {{table_heading_style}} |Product Desc.
||
||
PII<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>, PII-UMP<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>,  
PII<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>, PII-UMP<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>,  
Line 44: Line 44:
PII regulatory protein for glutamine synthase; potent activator of NRII/GlnL/NtrB phosphatase and inhibitor of NRII autophosphorylation; activates adenylation of GlnA by GlnE<ref name='LIB:EcoGene'/>
PII regulatory protein for glutamine synthase; potent activator of NRII/GlnL/NtrB phosphatase and inhibitor of NRII autophosphorylation; activates adenylation of GlnA by GlnE<ref name='LIB:EcoGene'/>
|-
|-
!align=left |Product Synonyms(s)
!align=left {{table_heading_style}} |Product Synonyms(s)
||
||
regulatory protein P-II for glutamine synthetase<ref name='LIB:Riley_2006'/>, B2553<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>,[protein PII]<ref name='LIB:EcoCyc10.6'/>, uridylyl-[protein PII]<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
regulatory protein P-II for glutamine synthetase<ref name='LIB:Riley_2006'/>, B2553<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>,[protein PII]<ref name='LIB:EcoCyc10.6'/>, uridylyl-[protein PII]<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
|-
|-
!align=left |Knock-Out Phenotype
!align=left {{table_heading_style}} |Function from GO
||
||


|-
|-
!align=left |Regulation/Expression
!align=left {{table_heading_style}} |Knock-Out Phenotype
||
 
|-
!align=left {{table_heading_style}} |Regulation/Expression
||
||
transcription unit(s): [[:Category:Txn_unit:glnB|glnB]]<ref name='LIB:EcoCyc10.6'/>, OP00126  
transcription unit(s): [[:Category:Txn_unit:glnB|glnB]]<ref name='LIB:EcoCyc10.6'/>, OP00126  
|-
|-
!align=left |Regulation/Activity
!align=left {{table_heading_style}} |Regulation/Activity
||
||


|-
!align=left {{table_heading_style}} |Quick Links
||
[http://ecoliwiki.net/tools/display_dna.php?gene=glnB&loc=MG1655:2685430..2685092,W3110:2686064..2685726,DH10B:2777195..2776857,REL606:2608107..2607769 DNA display]&nbsp;&nbsp;&nbsp; [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=2608107&end=2607769&gene=glnB&aa=mkkidaiikpfklddvrealaevgitgmtvtevkgfgrqkghtelyrgaeymvdflpkvkieivvpddivdtcvdtiirtaqtgkigdgkifvfdvarvirirtgeeddaai Protein display]&nbsp;&nbsp;&nbsp; [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=glnB+AND+escherichia+coli Pubmed(glnB)]&nbsp;&nbsp;&nbsp; [http://trimer.tamu.edu/cgi-bin/textpresso/2.1/ecoli/search?searchstring=glnB Textpresso(glnB)]


|- class="tableEdit_footer"  
|- class="tableEdit_footer"  

Revision as of 23:55, 21 January 2010

{{#css:Suppresslinks.css}}<css>h1 .editsection { display:none;} h2 .editsection { display:none;}</css>

Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions

See Help:Quickview for help with entering information in the Quickview table.

Standard Name

glnB

Gene Synonym(s)

ECK2550, b2553, JW2537[1]

Product Desc.

PII[2][3], PII-UMP[2][3],

Component of PII[2][3]


PII regulatory protein for glutamine synthase; potent activator of NRII/GlnL/NtrB phosphatase and inhibitor of NRII autophosphorylation; activates adenylation of GlnA by GlnE[4]

Product Synonyms(s)

regulatory protein P-II for glutamine synthetase[1], B2553[2][1],[protein PII][2], uridylyl-[protein PII][2][1]

Function from GO
Knock-Out Phenotype
Regulation/Expression

transcription unit(s): glnB[2], OP00126

Regulation/Activity
Quick Links

DNA display    Protein display    Pubmed(glnB)    Textpresso(glnB)

edit table

See Help:Quickview for help with entering information in the Quickview table.

Notes

[back to top]


GlnB is the archetypal PII protein; a ubiquitous family of small trimeric signal transduction proteins that facilitate regulation of bacterial nitrogen metabolism by controlling the activities of a variety of enzymes, transcription factors and membrane proteins. In nitrogen limitation GlnB is subject to post-translational modification by uridylylation (mediated by GlnD) of Tyr51 in the T-loop of each subunit. This modification is reversed in N-sufficient conditions. GlnB interacts with and regulates the activities of the histidine protein kinase NtrB, which controls phosphorylation of NtrC. It also regulates the activity of adenylyltransferase (GlnE) which in turn regulates the activity of glutamine synthetase (GlnA). glnK is a glnB paralog. [Comment provided by EcoTeam member Mike Merrick, 11.16.06][4]



References

[back to top]


  1. ↑ 1.0 1.1 1.2 1.3 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 2.5 2.6 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ 3.0 3.1 3.2 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
Retrieved from "https://ecoliwiki.org/colipedia/index.php?title=glnB:Quickview&oldid=1031694"