lpxB:Quickview: Difference between revisions

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!align=left |Standard Name
!align=left {{table_heading_style}} |Standard Name
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''lpxB''  
''lpxB''  
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!align=left |Gene Synonym(s)
!align=left {{table_heading_style}} |Gene Synonym(s)
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''ECK0181, b0182, JW0177, pgsB''<ref name='LIB:Riley_2006'/>
''ECK0181, b0182, JW0177, pgsB''<ref name='LIB:Riley_2006'/>
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!align=left |Product Desc.
!align=left {{table_heading_style}} |Product Desc.
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LpxB<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>;  
LpxB<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>;  
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Lipid A disaccharide synthase<ref name='LIB:EcoGene'/>
Lipid A disaccharide synthase<ref name='LIB:EcoGene'/>
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!align=left |Product Synonyms(s)
!align=left {{table_heading_style}} |Product Synonyms(s)
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tetraacyldisaccharide-1-P synthase<ref name='LIB:Riley_2006'/>, B0182<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, PgsB<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, LpxB<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
tetraacyldisaccharide-1-P synthase<ref name='LIB:Riley_2006'/>, B0182<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, PgsB<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, LpxB<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
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!align=left |Knock-Out Phenotype
!align=left {{table_heading_style}} |Function from GO
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'''Molecular Function'''
* GO:0005515 protein binding ([http://www.geneontology.org/GO.evidence.shtml IPI])
* GO:0008915 lipid-A-disaccharide synthase activity ([http://www.geneontology.org/GO.evidence.shtml IDA])
'''Biological Process'''
* GO:0009245 lipid A biosynthetic process ([http://www.geneontology.org/GO.evidence.shtml IMP,IEP])


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!align=left |Regulation/Expression
!align=left {{table_heading_style}} |Knock-Out Phenotype
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!align=left {{table_heading_style}} |Regulation/Expression
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transcription unit(s): [[:Category:Txn_unit:yaeT-hlpA-lpxD-fabZ-lpxAB-rnhB-dnaE|yaeT-hlpA-lpxD-fabZ-lpxAB-rnhB-dnaE]]<ref name='LIB:EcoCyc10.6'/>, ecfK-skp-lpxD-fabZ-lpxAB-rnhB-dnaE  
transcription unit(s): [[:Category:Txn_unit:yaeT-hlpA-lpxD-fabZ-lpxAB-rnhB-dnaE|yaeT-hlpA-lpxD-fabZ-lpxAB-rnhB-dnaE]]<ref name='LIB:EcoCyc10.6'/>, ecfK-skp-lpxD-fabZ-lpxAB-rnhB-dnaE  
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!align=left |Regulation/Activity
!align=left {{table_heading_style}} |Regulation/Activity
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!align=left {{table_heading_style}} |Quick Links
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[http://ecoliwiki.net/tools/display_dna.php?gene=lpxB&loc=MG1655:203348..204496,W3110:203348..204496,DH10B:177452..178600,REL606:206190..207338 DNA display]&nbsp;&nbsp;&nbsp; [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=206190&end=207338&gene=lpxB&aa=mteqrpltialvagetsgdilgagliralkehvpnarfvgvagprmqaegceawyemeelavmgivevlgrlrrllhiradltkrfgelkpdvfvgidapdfnitlegnlkkqgiktihyvspsvwawrqkrvfkigratdlvlaflpfekafydkynvpcrfightmadampldpdknaardvlgiphdahclallpgsrgaevemlsadflktaqllrqtypdleivvplvnakrreqferikaevapdlsvhlldgmgreamvasdaallasgtaalecmlakcpmvvgyrmkpftfwlakrlvktdyvslpnllagrelvkellqeecepqklaaallpllangktshamhdtfrelhqqircnadeqaaqavlelaq Protein display]&nbsp;&nbsp;&nbsp; [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=lpxB+AND+escherichia+coli Pubmed(lpxB)]&nbsp;&nbsp;&nbsp; [http://trimer.tamu.edu/cgi-bin/textpresso/2.1/ecoli/search?searchstring=lpxB Textpresso(lpxB)]


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Revision as of 00:14, 22 January 2010

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions

See Help:Quickview for help with entering information in the Quickview table.

Standard Name

lpxB

Gene Synonym(s)

ECK0181, b0182, JW0177, pgsB[1]

Product Desc.

LpxB[2][3];

Component of lipid A disaccharide synthase[3]

Lipid A disaccharide synthase[4]

Product Synonyms(s)

tetraacyldisaccharide-1-P synthase[1], B0182[2][1], PgsB[2][1], LpxB[2][1]

Function from GO

Molecular Function

Biological Process

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): yaeT-hlpA-lpxD-fabZ-lpxAB-rnhB-dnaE[2], ecfK-skp-lpxD-fabZ-lpxAB-rnhB-dnaE

Regulation/Activity
Quick Links

DNA display    Protein display    Pubmed(lpxB)    Textpresso(lpxB)

edit table

See Help:Quickview for help with entering information in the Quickview table.

Notes

[back to top]


The lpxB1 mutation is E326K, the result of a change in codon 326 from GAA to AAA (C.R.H. Raetz, pers. comm., 4/03, Duke Univ.). LpxB and GlpD associate.[4]



References

[back to top]


  1. ↑ 1.0 1.1 1.2 1.3 1.4 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ 3.0 3.1 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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