plsC:Gene Product(s): Difference between revisions

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|-
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!align=left {{table heading style}} |Standard name
!align=left |Standard name
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PlsC  
PlsC  
|-
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!align=left {{table heading style}} |Synonyms
!align=left |Synonyms
||
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1-acyl-sn-glycerol-3-phosphate acyltransferase<ref name='LIB:Riley_2006'/>, B3018<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, ParF<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, PlsC<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
1-acyl-sn-glycerol-3-phosphate acyltransferase<ref name='LIB:Riley_2006'/>, B3018<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, ParF<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, PlsC<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
|-
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!align=left {{table heading style}} |Product description
!align=left |Product description
||
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1-ACYLGLYCEROL-3-P-
1-ACYLGLYCEROL-3-P-
1-Acyl-n-glycerol-3-phosphate acyltransferase; affects partitioning<ref name='LIB:EcoGene'/>
1-Acyl-n-glycerol-3-phosphate acyltransferase; affects partitioning<ref name='LIB:EcoGene'/>
|-
|-
!align=left {{table heading style}} |EC number (for enzymes)
!align=left |EC number (for enzymes)
||
||
* [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.3.1.51 2.3.1.51]<ref name='LIB:Riley_2006'/>
* [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.3.1.51 2.3.1.51]<ref name='LIB:Riley_2006'/>


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!|Qualifier!!GO ID!!GO term name!!Reference(s)!!Evidence Code!!with/from!!Aspect!!Notes!!Status
!|Qualifier!!GO ID!!GO term name!!Reference(s)!!Evidence Code!!with/from!!Aspect!!Notes!!Status
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!|Partner Type!!Partner!!Notes!!References!!Evidence
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!|Compartment!!Description!!Evidence!!Source!!Notes
!|Compartment!!Description!!Evidence!!Source!!Notes
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plasma membrane
Inner Membrane
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|
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PMID:1557036
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From EcoCyc<ref name='LIB:EcoCyc11.1'/>
[http://www.york.ac.uk/res/thomas/Echolocation.cfm?EB_SubLocID=EB1351 EchoLocation:plsC]
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Inner Membrane
plasma membrane
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|
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PMID:1557036
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[http://www.york.ac.uk/res/thomas/Echolocation.cfm?EB_SubLocID=EB1351 EchoLocation:plsC] 
From EcoCyc<ref name='LIB:EcoCyc11.1'/>
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|-
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!align=left {{table heading style}} |Sequence
!align=left |Sequence
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[http://biocyc.org/ECOLI/sequence-aa?object=1-ACYLGLYCEROL-3-P-ACYLTRANSFER-MONOMER at EcoCyc]  
[http://biocyc.org/ECOLI/sequence-aa?object=1-ACYLGLYCEROL-3-P-ACYLTRANSFER-MONOMER at EcoCyc]  
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AAGKV</pre>  
AAGKV</pre>  
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!align=left {{table heading style}} |Length
!align=left |Length
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245
245
|-
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!align=left {{table heading style}} |Mol. Wt
!align=left |Mol. Wt
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27.453 kDa
27.453 kDa
|-
|-
!align=left {{table heading style}} |pI
!align=left |pI
||
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10.0 (calculated)
10.0 (calculated)
|-
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!align=left {{table heading style}} |Extinction coefficient
!align=left |Extinction coefficient
||
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28,420 - 29,045 (calc based on 8 Y, 3 W, and 5 C residues)
28,420 - 29,045 (calc based on 8 Y, 3 W, and 5 C residues)


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<beststructure>
<beststructure>
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</beststructure>
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View models at:
View models at:
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* [http://spock.genes.nig.ac.jp/~genome/search.html Genomes TO Protein] (GTOP)
* [http://spock.genes.nig.ac.jp/~genome/search.html Genomes TO Protein] (GTOP)


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Revision as of 03:41, 9 January 2010

{{#css:Suppresslinks.css}}<css>h1 .editsection { display:none;} h2 .editsection { display:none;}</css>

Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
Nomenclature Function Interactions Localization Sequence Domains Structure Resources Accessions Links References Suggestions

Nomenclature

See Help:Product_nomenclature for help entering or editing information in this section of EcoliWiki.

Standard name

PlsC

Synonyms

1-acyl-sn-glycerol-3-phosphate acyltransferase[1], B3018[2][1], ParF[2][1], PlsC[2][1]

Product description

1-ACYLGLYCEROL-3-P- 1-Acyl-n-glycerol-3-phosphate acyltransferase; affects partitioning[3]

EC number (for enzymes)
edit table


Notes

Function

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Gene Ontology
See Help:Gene_ontology for help entering or editing GO terms and GO annotations in EcoliWiki.

Qualifier GO ID GO term name Reference(s) Evidence Code with/from Aspect Notes Status
GO:0016740

transferase activity

GO_REF:0000004

IEA: Inferred from Electronic Annotation

SP_KW:KW-0808

F

Seeded from EcoCyc [4]

complete

GO:0016020

membrane

GO_REF:0000002
GO_REF:0000004
GO_REF:0000004

IEA: Inferred from Electronic Annotation

InterPro:IPR004552
SP_KW:KW-0397
SP_KW:KW-0472

C

Seeded from EcoCyc 12.5 [5]

complete

GO:0008654

phospholipid biosynthetic process

GO_REF:0000002
GO_REF:0000004

IEA: Inferred from Electronic Annotation

InterPro:IPR004552
SP_KW:KW-0594

P

Seeded from EcoCyc [4]

complete

GO:0008415

acyltransferase activity

GO_REF:0000002
GO_REF:0000004

IEA: Inferred from Electronic Annotation

InterPro:IPR002123
SP_KW:KW-0012

F

Seeded from EcoCyc [4]

complete

GO:0008152

metabolic process

GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR002123

P

Seeded from EcoCyc [4]

complete

GO:0003841

1-acylglycerol-3-phosphate O-acyltransferase activity

GO_REF:0000002
GO_REF:0000003

IEA: Inferred from Electronic Annotation

InterPro:IPR004552
EC:2.3.1.51

F

Seeded from EcoCyc [4]

complete

GO:0031225

anchored to membrane

C

Seeded from Riley et al 2006 [1].

required fields missing

GO:0005886

plasma membrane

GO_REF:0000004
GO_REF:0000004
GO_REF:0000023

IEA: Inferred from Electronic Annotation

SP_KW:KW-0997
SP_KW:KW-1003
SP_SL:SL-0037

C

Seeded from EcoCyc [4]

complete

GO:0006654

phosphatidic acid biosynthetic process

P

Seeded from EcoCyc 11.1[6].

required fields missing

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Interactions See Help:Product_interactions for help entering or editing information about gene product interactions in this section of EcoliWiki.

Partner Type Partner Notes References Evidence
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Notes

Localization

See Help:Product_localization for how to add or edit information in this section of EcoliWiki.

Compartment Description Evidence Source Notes

Inner Membrane

PMID:1557036[7]

EchoLocation:plsC

plasma membrane

From EcoCyc[6]


edit table


Notes

Structure and Physical Properties

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Physical Properties See Help:Product_physical_properties for help entering or editing information about the physical properties of this gene product.

Sequence

at EcoCyc 

MLYIFRLIIT VIYSILVCVF GSIYCLFSPR NPKHVATFGH MFGRLAPLFG LKVECRKPTD
AESYGNAIYI ANHQNNYDMV TASNIVQPPT VTVGKKSLLW IPFFGQLYWL TGNLLIDRNN
RTKAHGTIAE VVNHFKKRRI SIWMFPEGTR SRGRGLLPFK TGAFHAAIAA GVPIIPVCVS
TTSNKINLNR LHNGLVIVEM LPPIDVSQYG KDQVRELAAH CRSIMEQKIA ELDKEVAERE
AAGKV
Length

245

Mol. Wt

27.453 kDa

pI

10.0 (calculated)

Extinction coefficient

28,420 - 29,045 (calc based on 8 Y, 3 W, and 5 C residues)

edit table


Domains/Motifs/Modification Sites

See Help:Product_domains_motifs for help entering or editing information in this section of EcoliWiki.

Type Residues Description Notes
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<motif_map/>

Structure
See Help:Product_structure for help entering or editing information in this section of EcoliWiki.

Structures

<beststructure> gene=plsC taxon=562,83333 </beststructure>

Models

View models at:

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Structure figures

Notes

Gene Product Resources

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See Help:Product_resources for help with entering or editing information in this section of EcoliWiki.

Resource type Source Notes/Reference
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Notes

Accessions in Other Databases

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

EcoCyc (EcoliWiki Page)

EcoCyc:1-ACYLGLYCEROL-3-P-ACYLTRANSFER-MONOMER

UniProt (EcoliWiki Page)

UniProt:P26647

PFAM (EcoliWiki Page)

PFAM:PF01553

RefSeq (EcoliWiki Page)

RefSeq:NP_417490


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Notes

Links

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References

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See Help:References for how to manage references in EcoliWiki.

  1. ↑ 1.0 1.1 1.2 1.3 1.4 1.5 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
  4. ↑ 4.0 4.1 4.2 4.3 4.4 4.5 EcoCyc (release 13.0; 2009) Keseler, IM et al. (2009) Nucleic Acids Res. 37(Database issue):D464-70
  5. ↑ EcoCyc (release 12.5; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  6. ↑ 6.0 6.1 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  7. ↑ Coleman, J (1992) Characterization of the Escherichia coli gene for 1-acyl-sn-glycerol-3-phosphate acyltransferase (plsC). Mol. Gen. Genet. 232 295-303 PubMed

Categories

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